RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 A0A1W2PQ27 194 aa9.04□□□□□ -0.96
CCDC39-202ENST00000471307 A0A1W2PQ64 194 aa9.04□□□□□ -0.96
CCDC39-202ENST00000471307 A0A1W2PQC6 194 aa9.04□□□□□ -0.96
CCDC39-202ENST00000471307 A0A1W2PQD8 194 aa9.04□□□□□ -0.96
CCDC39-202ENST00000471307 AURKAO14965 403 aa9.04□□□□□ -0.96
CCDC39-202ENST00000471307 DLG4P78352 724 aa9.04□□□□□ -0.96
CCDC39-202ENST00000471307 AMPD2Q01433 879 aa9.04□□□□□ -0.96
CCDC39-202ENST00000471307 KRTAP9-9Q9BYP9 154 aa9.04□□□□□ -0.96
CCDC39-202ENST00000471307 KRTAP9-4Q9BYQ2 154 aa9.04□□□□□ -0.96
CCDC39-202ENST00000471307 TNFRSF12AQ9NP84 129 aa9.04□□□□□ -0.96
CCDC39-202ENST00000471307 SUGT1Q9Y2Z0 365 aa9.04□□□□□ -0.96
CCDC39-202ENST00000471307 CFPP27918 469 aa9.03□□□□□ -0.96
CCDC39-202ENST00000471307 RBM25P49756 843 aaKnown RBP9.03□□□□□ -0.96
CCDC39-202ENST00000471307 SRSF3P84103 164 aaKnown RBP9.03□□□□□ -0.96
CCDC39-202ENST00000471307 POMZP3Q6PJE2 187 aa9.03□□□□□ -0.96
CCDC39-202ENST00000471307 NLGN2Q8NFZ4 835 aa9.03□□□□□ -0.96
CCDC39-202ENST00000471307 APBA2Q99767 749 aa9.03□□□□□ -0.96
CCDC39-202ENST00000471307 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.03□□□□□ -0.96
CCDC39-202ENST00000471307 TINF2Q9BSI4 451 aa9.03□□□□□ -0.96
CCDC39-202ENST00000471307 SMG5Q9UPR3 1016 aaKnown RBP9.03□□□□□ -0.96
CCDC39-202ENST00000471307 NPIPB6E9PJ23 425 aa9.02□□□□□ -0.97
CCDC39-202ENST00000471307 ARID5AQ03989 594 aa9.02□□□□□ -0.97
CCDC39-202ENST00000471307 SIAH1Q8IUQ4 282 aa9.02□□□□□ -0.97
CCDC39-202ENST00000471307 LRRC56Q8IYG6 542 aaPredicted RBP9.02□□□□□ -0.97
CCDC39-202ENST00000471307 ZNF513Q8N8E2 541 aaPredicted RBP9.02□□□□□ -0.97
CCDC39-202ENST00000471307 SIRT5Q9NXA8 310 aa9.02□□□□□ -0.97
CCDC39-202ENST00000471307 ACTR10Q9NZ32 417 aa9.02□□□□□ -0.97
CCDC39-202ENST00000471307 PRKAG3Q9UGI9 489 aa9.02□□□□□ -0.97
CCDC39-202ENST00000471307 BACE2Q9Y5Z0 518 aa9.02□□□□□ -0.97
CCDC39-202ENST00000471307 TRBV23OR9-2A0A075B6M9 112 aa9.01□□□□□ -0.97
CCDC39-202ENST00000471307 SMAD7O15105 426 aaKnown RBP9.01□□□□□ -0.97
CCDC39-202ENST00000471307 FGRP09769 529 aa9.01□□□□□ -0.97
CCDC39-202ENST00000471307 L1CAMP32004 1257 aa9.01□□□□□ -0.97
CCDC39-202ENST00000471307 SEPHS1P49903 392 aa9.01□□□□□ -0.97
CCDC39-202ENST00000471307 LINC00310P59036 64 aa9.01□□□□□ -0.97
CCDC39-202ENST00000471307 MVKQ03426 396 aa9.01□□□□□ -0.97
CCDC39-202ENST00000471307 CBX2Q14781 532 aaPredicted RBP9.01□□□□□ -0.97
CCDC39-202ENST00000471307 KIR3DS1Q14943 382 aa9.01□□□□□ -0.97
CCDC39-202ENST00000471307 NR1I3Q14994 352 aa9.01□□□□□ -0.97
CCDC39-202ENST00000471307 C1QL4Q86Z23 238 aa9.01□□□□□ -0.97
CCDC39-202ENST00000471307 SLC43A3Q8NBI5 491 aa9.01□□□□□ -0.97
CCDC39-202ENST00000471307 BVESQ8NE79 360 aa9.01□□□□□ -0.97
CCDC39-202ENST00000471307 GCM1Q9NP62 436 aa9.01□□□□□ -0.97
CCDC39-202ENST00000471307 MBD1Q9UIS9 605 aaPredicted RBP9.01□□□□□ -0.97
CCDC39-202ENST00000471307 C2orf71A6NGG8 1288 aa9□□□□□ -0.97
CCDC39-202ENST00000471307 SRGAP3O43295 1099 aa9□□□□□ -0.97
CCDC39-202ENST00000471307 VIPR1P32241 457 aa9□□□□□ -0.97
CCDC39-202ENST00000471307 CIAPIN1Q6FI81 312 aa9□□□□□ -0.97
CCDC39-202ENST00000471307 MCMBPQ9BTE3 642 aa9□□□□□ -0.97
CCDC39-202ENST00000471307 PDLIM7Q9NR12 457 aa9□□□□□ -0.97
CCDC39-202ENST00000471307 IGSF5Q9NSI5 407 aa9□□□□□ -0.97
CCDC39-202ENST00000471307 KLHL14Q9P2G3 628 aa9□□□□□ -0.97
CCDC39-202ENST00000471307 AKT3Q9Y243 479 aa9□□□□□ -0.97
CCDC39-202ENST00000471307 EMC9Q9Y3B6 208 aa9□□□□□ -0.97
CCDC39-202ENST00000471307 MRVI1Q9Y6F6 885 aa9□□□□□ -0.97
CCDC39-202ENST00000471307 STXBP3O00186 592 aa8.99□□□□□ -0.97
CCDC39-202ENST00000471307 VAMP4O75379 141 aa8.99□□□□□ -0.97
CCDC39-202ENST00000471307 RAB3GAP1Q15042 981 aa8.99□□□□□ -0.97
CCDC39-202ENST00000471307 APEX2Q9UBZ4 518 aa8.99□□□□□ -0.97
CCDC39-202ENST00000471307 E9PSI1 815 aa8.98□□□□□ -0.97
CCDC39-202ENST00000471307 NOP56O00567 594 aaKnown RBP8.98□□□□□ -0.97
CCDC39-202ENST00000471307 SDHBP21912 280 aa8.98□□□□□ -0.97
CCDC39-202ENST00000471307 DPY19L1Q2PZI1 675 aa8.98□□□□□ -0.97
CCDC39-202ENST00000471307 SPOCD1Q6ZMY3 1216 aa8.98□□□□□ -0.97
CCDC39-202ENST00000471307 AMIGO3Q86WK7 504 aa8.98□□□□□ -0.97
CCDC39-202ENST00000471307 GMLQ99445 158 aa8.98□□□□□ -0.97
CCDC39-202ENST00000471307 A0A1W2PQJ5 194 aa8.97□□□□□ -0.97
CCDC39-202ENST00000471307 N4BP3O15049 544 aa8.97□□□□□ -0.97
CCDC39-202ENST00000471307 CYBBP04839 570 aa8.97□□□□□ -0.97
CCDC39-202ENST00000471307 MSL3P1P0C860 447 aa8.97□□□□□ -0.97
CCDC39-202ENST00000471307 MAPKAPK2P49137 400 aa8.97□□□□□ -0.97
CCDC39-202ENST00000471307 FXNQ16595 210 aa8.97□□□□□ -0.97
CCDC39-202ENST00000471307 PAQR3Q6TCH7 311 aa8.97□□□□□ -0.97
CCDC39-202ENST00000471307 FAM178BQ8IXR5 827 aa8.97□□□□□ -0.97
CCDC39-202ENST00000471307 PODXL2Q9NZ53 605 aa8.97□□□□□ -0.97
CCDC39-202ENST00000471307 NUDT19A8MXV4 375 aa8.96□□□□□ -0.98
CCDC39-202ENST00000471307 RFXAPO00287 272 aa8.96□□□□□ -0.98
CCDC39-202ENST00000471307 PAMP19021 973 aa8.96□□□□□ -0.98
CCDC39-202ENST00000471307 ETFBP38117 255 aa8.96□□□□□ -0.98
CCDC39-202ENST00000471307 ZNF385BQ569K4 471 aa8.96□□□□□ -0.98
CCDC39-202ENST00000471307 C6orf15Q6UXA7 325 aaPredicted RBP8.96□□□□□ -0.98
CCDC39-202ENST00000471307 RPTNQ6XPR3 784 aa8.96□□□□□ -0.98
CCDC39-202ENST00000471307 MCF2L2Q86YR7 1114 aa8.96□□□□□ -0.98
CCDC39-202ENST00000471307 TRIM59Q8IWR1 403 aa8.96□□□□□ -0.98
CCDC39-202ENST00000471307 COPS5Q92905 334 aa8.96□□□□□ -0.98
CCDC39-202ENST00000471307 SIGLEC10Q96LC7 697 aa8.96□□□□□ -0.98
CCDC39-202ENST00000471307 SGPP1Q9BX95 441 aa8.96□□□□□ -0.98
CCDC39-202ENST00000471307 CNTD2Q9H8S5 307 aa8.96□□□□□ -0.98
CCDC39-202ENST00000471307 ZNF408Q9H9D4 720 aa8.96□□□□□ -0.98
CCDC39-202ENST00000471307 CNOT6Q9ULM6 557 aaKnown RBP8.96□□□□□ -0.98
CCDC39-202ENST00000471307 NUAK1O60285 661 aa8.95□□□□□ -0.98
CCDC39-202ENST00000471307 DBHP09172 617 aa8.95□□□□□ -0.98
CCDC39-202ENST00000471307 LARP1BQ659C4 914 aaKnown RBP8.95□□□□□ -0.98
CCDC39-202ENST00000471307 ZC3H14Q6PJT7 736 aaKnown RBP8.95□□□□□ -0.98
CCDC39-202ENST00000471307 TMC6Q7Z403 805 aa8.95□□□□□ -0.98
CCDC39-202ENST00000471307 MRGPRX3Q96LB0 322 aa8.95□□□□□ -0.98
CCDC39-202ENST00000471307 NPHP3-ACAD11A0A0J9YXS1 232 aa8.94□□□□□ -0.98
CCDC39-202ENST00000471307 KCNH1O95259 989 aa8.94□□□□□ -0.98
CCDC39-202ENST00000471307 ZSCAN22P10073 491 aaPredicted RBP8.94□□□□□ -0.98
CCDC39-202ENST00000471307 DNAJA1P31689 397 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms