RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 CCL15Q16663 113 aa11.16□□□□□ -0.62
CCM2-204ENST00000470837 TREML2Q5T2D2 321 aa11.16□□□□□ -0.62
CCM2-204ENST00000470837 SPRYD7Q5W111 196 aa11.16□□□□□ -0.62
CCM2-204ENST00000470837 RGMBQ6NW40 437 aa11.16□□□□□ -0.62
CCM2-204ENST00000470837 PAXIP1Q6ZW49 1069 aaPredicted RBP11.16□□□□□ -0.62
CCM2-204ENST00000470837 OXER1Q8TDS5 423 aa11.16□□□□□ -0.62
CCM2-204ENST00000470837 CCDC102AQ96A19 550 aa11.16□□□□□ -0.62
CCM2-204ENST00000470837 ATG4CQ96DT6 458 aa11.16□□□□□ -0.62
CCM2-204ENST00000470837 RAVER2Q9HCJ3 691 aaKnown RBP11.16□□□□□ -0.62
CCM2-204ENST00000470837 TFIP11Q9UBB9 837 aaKnown RBP11.16□□□□□ -0.62
CCM2-204ENST00000470837 POLR2AP24928 1970 aaKnown RBP11.16□□□□□ -0.62
CCM2-204ENST00000470837 PASKQ96RG2 1323 aa11.15□□□□□ -0.62
CCM2-204ENST00000470837 PRPF40AO75400 957 aaKnown RBP11.15□□□□□ -0.62
CCM2-204ENST00000470837 FOSP01100 380 aaPredicted RBP11.15□□□□□ -0.62
CCM2-204ENST00000470837 AP3B2Q13367 1082 aa11.15□□□□□ -0.62
CCM2-204ENST00000470837 TKFCQ3LXA3 575 aa11.15□□□□□ -0.62
CCM2-204ENST00000470837 JAKMIP3Q5VZ66 844 aa11.15□□□□□ -0.62
CCM2-204ENST00000470837 ANO1Q5XXA6 986 aa11.15□□□□□ -0.62
CCM2-204ENST00000470837 SNRNP48Q6IEG0 339 aaKnown RBP11.15□□□□□ -0.62
CCM2-204ENST00000470837 TYW1BQ6NUM6 668 aa11.15□□□□□ -0.62
CCM2-204ENST00000470837 FAM173BQ6P4H8 233 aa11.15□□□□□ -0.62
CCM2-204ENST00000470837 SAPCD2Q86UD0 394 aa11.15□□□□□ -0.62
CCM2-204ENST00000470837 KCNG4Q8TDN1 519 aa11.15□□□□□ -0.62
CCM2-204ENST00000470837 SMCR8Q8TEV9 937 aaPredicted RBP11.15□□□□□ -0.62
CCM2-204ENST00000470837 NAP1L4Q99733 375 aaKnown RBP11.15□□□□□ -0.62
CCM2-204ENST00000470837 TEX13BQ9BXU2 312 aa11.15□□□□□ -0.62
CCM2-204ENST00000470837 ASCC2Q9H1I8 757 aaPredicted RBP11.15□□□□□ -0.62
CCM2-204ENST00000470837 BIN2Q9UBW5 565 aaPredicted RBP11.15□□□□□ -0.62
CCM2-204ENST00000470837 PCDHA6Q9UN73 950 aa11.15□□□□□ -0.62
CCM2-204ENST00000470837 CNPY2Q9Y2B0 182 aa11.15□□□□□ -0.62
CCM2-204ENST00000470837 PCDHA8Q9Y5H6 950 aa11.15□□□□□ -0.62
CCM2-204ENST00000470837 ATAD5Q96QE3 1844 aa11.14□□□□□ -0.63
CCM2-204ENST00000470837 MANSC4A6NHS7 340 aaPredicted RBP11.14□□□□□ -0.63
CCM2-204ENST00000470837 SPDYE16A6NNV3 312 aaPredicted RBP11.14□□□□□ -0.63
CCM2-204ENST00000470837 YEATS4O95619 227 aa11.14□□□□□ -0.63
CCM2-204ENST00000470837 CFBP00751 764 aa11.14□□□□□ -0.63
CCM2-204ENST00000470837 COPB2P35606 906 aa11.14□□□□□ -0.63
CCM2-204ENST00000470837 STAT3P40763 770 aa11.14□□□□□ -0.63
CCM2-204ENST00000470837 ME1P48163 572 aa11.14□□□□□ -0.63
CCM2-204ENST00000470837 SKOR2Q2VWA4 1001 aaPredicted RBP11.14□□□□□ -0.63
CCM2-204ENST00000470837 TTC38Q5R3I4 469 aa11.14□□□□□ -0.63
CCM2-204ENST00000470837 ANKRD23Q86SG2 305 aa11.14□□□□□ -0.63
CCM2-204ENST00000470837 CCAR1Q8IX12 1150 aaKnown RBP11.14□□□□□ -0.63
CCM2-204ENST00000470837 SAMD3Q8N6K7 520 aa11.14□□□□□ -0.63
CCM2-204ENST00000470837 RASGRP4Q8TDF6 673 aa11.14□□□□□ -0.63
CCM2-204ENST00000470837 AGBL1Q96MI9 1066 aa11.14□□□□□ -0.63
CCM2-204ENST00000470837 TRERF1Q96PN7 1200 aa11.14□□□□□ -0.63
CCM2-204ENST00000470837 PARK7Q99497 189 aaKnown RBP11.14□□□□□ -0.63
CCM2-204ENST00000470837 HOMER2Q9NSB8 354 aa11.14□□□□□ -0.63
CCM2-204ENST00000470837 POLR3EQ9NVU0 708 aa11.14□□□□□ -0.63
CCM2-204ENST00000470837 RTEL1Q9NZ71 1219 aa11.14□□□□□ -0.63
CCM2-204ENST00000470837 SLC45A1Q9Y2W3 748 aa11.14□□□□□ -0.63
CCM2-204ENST00000470837 TLL2Q9Y6L7 1015 aa11.14□□□□□ -0.63
CCM2-204ENST00000470837 PDHXO00330 501 aa11.13□□□□□ -0.63
CCM2-204ENST00000470837 ATP2A1O14983 1001 aa11.13□□□□□ -0.63
CCM2-204ENST00000470837 GJA5P36382 358 aa11.13□□□□□ -0.63
CCM2-204ENST00000470837 INHBEP58166 350 aa11.13□□□□□ -0.63
CCM2-204ENST00000470837 HERVK_113P62684 666 aa11.13□□□□□ -0.63
CCM2-204ENST00000470837 SREBF2Q12772 1141 aa11.13□□□□□ -0.63
CCM2-204ENST00000470837 NPY5RQ15761 445 aa11.13□□□□□ -0.63
CCM2-204ENST00000470837 UBE2SQ16763 222 aa11.13□□□□□ -0.63
CCM2-204ENST00000470837 INF2Q27J81 1249 aa11.13□□□□□ -0.63
CCM2-204ENST00000470837 NEK8Q86SG6 692 aa11.13□□□□□ -0.63
CCM2-204ENST00000470837 ZNF784Q8NCA9 323 aaPredicted RBP11.13□□□□□ -0.63
CCM2-204ENST00000470837 SHISA4Q96DD7 197 aa11.13□□□□□ -0.63
CCM2-204ENST00000470837 USP28Q96RU2 1077 aa11.13□□□□□ -0.63
CCM2-204ENST00000470837 P2RX7Q99572 595 aaKnown RBP11.13□□□□□ -0.63
CCM2-204ENST00000470837 PAGR1Q9BTK6 254 aa11.13□□□□□ -0.63
CCM2-204ENST00000470837 GDPD2Q9HCC8 539 aa11.13□□□□□ -0.63
CCM2-204ENST00000470837 RNF146Q9NTX7 359 aa11.13□□□□□ -0.63
CCM2-204ENST00000470837 MAP3K20Q9NYL2 800 aaKnown RBP11.13□□□□□ -0.63
CCM2-204ENST00000470837 FBXO40Q9UH90 709 aa11.13□□□□□ -0.63
CCM2-204ENST00000470837 ADAMTS5Q9UNA0 930 aa11.13□□□□□ -0.63
CCM2-204ENST00000470837 ELP1O95163 1332 aa11.12□□□□□ -0.63
CCM2-204ENST00000470837 M0R2N6 131 aa11.12□□□□□ -0.63
CCM2-204ENST00000470837 PIK3CDO00329 1044 aa11.12□□□□□ -0.63
CCM2-204ENST00000470837 SPTLC2O15270 562 aa11.12□□□□□ -0.63
CCM2-204ENST00000470837 MARCH6O60337 910 aa11.12□□□□□ -0.63
CCM2-204ENST00000470837 CCNT1O60563 726 aaKnown RBP11.12□□□□□ -0.63
CCM2-204ENST00000470837 SLC25A27O95847 323 aa11.12□□□□□ -0.63
CCM2-204ENST00000470837 MBD3O95983 291 aa11.12□□□□□ -0.63
CCM2-204ENST00000470837 GCLCP48506 637 aaPredicted RBP11.12□□□□□ -0.63
CCM2-204ENST00000470837 NASPP49321 788 aaPredicted RBP11.12□□□□□ -0.63
CCM2-204ENST00000470837 CCNA1P78396 465 aa11.12□□□□□ -0.63
CCM2-204ENST00000470837 NBR1Q14596 966 aa11.12□□□□□ -0.63
CCM2-204ENST00000470837 TMEM132BQ14DG7 1078 aa11.12□□□□□ -0.63
CCM2-204ENST00000470837 LETM2Q2VYF4 491 aa11.12□□□□□ -0.63
CCM2-204ENST00000470837 TPRNQ4KMQ1 711 aa11.12□□□□□ -0.63
CCM2-204ENST00000470837 USP17L6PQ6QN14 398 aa11.12□□□□□ -0.63
CCM2-204ENST00000470837 NSMFQ6X4W1 530 aa11.12□□□□□ -0.63
CCM2-204ENST00000470837 LBX2Q6XYB7 198 aa11.12□□□□□ -0.63
CCM2-204ENST00000470837 FCHSD1Q86WN1 690 aa11.12□□□□□ -0.63
CCM2-204ENST00000470837 RASAL3Q86YV0 1011 aa11.12□□□□□ -0.63
CCM2-204ENST00000470837 CHST13Q8NET6 341 aa11.12□□□□□ -0.63
CCM2-204ENST00000470837 TBCKQ8TEA7 893 aa11.12□□□□□ -0.63
CCM2-204ENST00000470837 LEO1Q8WVC0 666 aaPredicted RBP11.12□□□□□ -0.63
CCM2-204ENST00000470837 TNFRSF25Q93038 417 aa11.12□□□□□ -0.63
CCM2-204ENST00000470837 HHIPL1Q96JK4 782 aa11.12□□□□□ -0.63
CCM2-204ENST00000470837 MS4A4AQ96JQ5 239 aa11.12□□□□□ -0.63
CCM2-204ENST00000470837 ANO3Q9BYT9 981 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms