RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 ABL1P00519 1130 aa10.61□□□□□ -0.71
TOP3A-203ENST00000469739 CHRM1P11229 460 aaPredicted RBP10.61□□□□□ -0.71
TOP3A-203ENST00000469739 FCER1AP12319 257 aa10.61□□□□□ -0.71
TOP3A-203ENST00000469739 CACNB1Q02641 598 aaPredicted RBP10.61□□□□□ -0.71
TOP3A-203ENST00000469739 NAALADL2Q58DX5 795 aa10.61□□□□□ -0.71
TOP3A-203ENST00000469739 SPATA1Q5VX52 437 aa10.61□□□□□ -0.71
TOP3A-203ENST00000469739 CDC42EP5Q6NZY7 148 aa10.61□□□□□ -0.71
TOP3A-203ENST00000469739 SLC30A10Q6XR72 485 aa10.61□□□□□ -0.71
TOP3A-203ENST00000469739 C4orf32Q8N8J7 132 aa10.61□□□□□ -0.71
TOP3A-203ENST00000469739 WDR24Q96S15 920 aa10.61□□□□□ -0.71
TOP3A-203ENST00000469739 PPP2R2CQ9Y2T4 447 aa10.61□□□□□ -0.71
TOP3A-203ENST00000469739 PAXBP1Q9Y5B6 917 aa10.61□□□□□ -0.71
TOP3A-203ENST00000469739 FAM170AA1A519 330 aa10.6□□□□□ -0.71
TOP3A-203ENST00000469739 USP17L10C9JJH3 530 aa10.6□□□□□ -0.71
TOP3A-203ENST00000469739 SRGNP10124 158 aa10.6□□□□□ -0.71
TOP3A-203ENST00000469739 PDHBP11177 359 aa10.6□□□□□ -0.71
TOP3A-203ENST00000469739 GNAQP50148 359 aa10.6□□□□□ -0.71
TOP3A-203ENST00000469739 FXR1P51114 621 aaKnown RBP eCLIP10.6□□□□□ -0.71
TOP3A-203ENST00000469739 ASIC1P78348 528 aa10.6□□□□□ -0.71
TOP3A-203ENST00000469739 KRT31Q15323 416 aa10.6□□□□□ -0.71
TOP3A-203ENST00000469739 PCMTD1Q96MG8 357 aaPredicted RBP10.6□□□□□ -0.71
TOP3A-203ENST00000469739 ZNF287Q9HBT7 754 aa10.6□□□□□ -0.71
TOP3A-203ENST00000469739 DISC1Q9NRI5 854 aa10.6□□□□□ -0.71
TOP3A-203ENST00000469739 FEZ2Q9UHY8 353 aaPredicted RBP10.6□□□□□ -0.71
TOP3A-203ENST00000469739 SERPINB13Q9UIV8 391 aa10.6□□□□□ -0.71
TOP3A-203ENST00000469739 USP17L15C9J2P7 530 aa10.6□□□□□ -0.71
TOP3A-203ENST00000469739 USP17L13C9JLJ4 530 aa10.6□□□□□ -0.71
TOP3A-203ENST00000469739 USP17L11C9JVI0 530 aa10.6□□□□□ -0.71
TOP3A-203ENST00000469739 USP17L18D6R9N7 530 aa10.6□□□□□ -0.71
TOP3A-203ENST00000469739 USP17L22D6RA61 530 aa10.6□□□□□ -0.71
TOP3A-203ENST00000469739 USP17L17D6RBQ6 530 aa10.6□□□□□ -0.71
TOP3A-203ENST00000469739 USP17L19D6RCP7 530 aa10.6□□□□□ -0.71
TOP3A-203ENST00000469739 USP17L20D6RJB6 530 aa10.6□□□□□ -0.71
TOP3A-203ENST00000469739 USP17L24Q0WX57 530 aa10.6□□□□□ -0.71
TOP3A-203ENST00000469739 NONOQ15233 471 aaKnown RBP eCLIP10.6□□□□□ -0.71
TOP3A-203ENST00000469739 KMT5BQ4FZB7 885 aa10.6□□□□□ -0.71
TOP3A-203ENST00000469739 NT5DC1Q5TFE4 455 aa10.6□□□□□ -0.71
TOP3A-203ENST00000469739 USP17L6PQ6QN14 398 aa10.6□□□□□ -0.71
TOP3A-203ENST00000469739 SH3RF1Q7Z6J0 888 aa10.6□□□□□ -0.71
TOP3A-203ENST00000469739 CABP7Q86V35 215 aa10.6□□□□□ -0.71
TOP3A-203ENST00000469739 REXO1Q8N1G1 1221 aaKnown RBP10.6□□□□□ -0.71
TOP3A-203ENST00000469739 ZNF397Q8NF99 534 aaPredicted RBP10.6□□□□□ -0.71
TOP3A-203ENST00000469739 CCDC148Q8NFR7 591 aa10.6□□□□□ -0.71
TOP3A-203ENST00000469739 TRIM47Q96LD4 638 aa10.6□□□□□ -0.71
TOP3A-203ENST00000469739 C6orf50Q9HD87 102 aa10.6□□□□□ -0.71
TOP3A-203ENST00000469739 TBC1D7Q9P0N9 293 aa10.6□□□□□ -0.71
TOP3A-203ENST00000469739 SLC37A4O43826 429 aa10.59□□□□□ -0.71
TOP3A-203ENST00000469739 PAK1Q13153 545 aa10.59□□□□□ -0.71
TOP3A-203ENST00000469739 USH1GQ495M9 461 aa10.59□□□□□ -0.71
TOP3A-203ENST00000469739 ACRBPQ8NEB7 543 aa10.59□□□□□ -0.71
TOP3A-203ENST00000469739 SECISBP2LQ93073 1101 aaKnown RBP10.59□□□□□ -0.71
TOP3A-203ENST00000469739 GSDMAQ96QA5 445 aa10.59□□□□□ -0.71
TOP3A-203ENST00000469739 NUDT12Q9BQG2 462 aa10.59□□□□□ -0.71
TOP3A-203ENST00000469739 SRRTQ9BXP5 876 aaKnown RBP10.59□□□□□ -0.71
TOP3A-203ENST00000469739 MRPL44Q9H9J2 332 aaKnown RBP10.59□□□□□ -0.71
TOP3A-203ENST00000469739 SLC39A2Q9NP94 309 aa10.59□□□□□ -0.71
TOP3A-203ENST00000469739 TCP11L1Q9NUJ3 509 aa10.59□□□□□ -0.71
TOP3A-203ENST00000469739 MTMR4Q9NYA4 1195 aa10.59□□□□□ -0.71
TOP3A-203ENST00000469739 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.59□□□□□ -0.71
TOP3A-203ENST00000469739 ATP6V0A2Q9Y487 856 aa10.59□□□□□ -0.71
TOP3A-203ENST00000469739 PARP3Q9Y6F1 533 aa10.59□□□□□ -0.71
TOP3A-203ENST00000469739 BMP15O95972 392 aa10.59□□□□□ -0.71
TOP3A-203ENST00000469739 TNNT3P45378 269 aaPredicted RBP10.59□□□□□ -0.71
TOP3A-203ENST00000469739 UBXN1Q04323 297 aa10.59□□□□□ -0.71
TOP3A-203ENST00000469739 NR1I3Q14994 352 aa10.59□□□□□ -0.71
TOP3A-203ENST00000469739 LRRC41Q15345 812 aa10.59□□□□□ -0.71
TOP3A-203ENST00000469739 CARD6Q9BX69 1037 aa10.59□□□□□ -0.71
TOP3A-203ENST00000469739 ZHX3Q9H4I2 956 aa10.59□□□□□ -0.71
TOP3A-203ENST00000469739 DDTLA6NHG4 134 aaPredicted RBP10.59□□□□□ -0.71
TOP3A-203ENST00000469739 KLK7P49862 253 aa10.59□□□□□ -0.71
TOP3A-203ENST00000469739 HNRNPH2P55795 449 aaKnown RBP10.59□□□□□ -0.71
TOP3A-203ENST00000469739 PDE4DQ08499 809 aa10.59□□□□□ -0.71
TOP3A-203ENST00000469739 ZYXQ15942 572 aaKnown RBP10.59□□□□□ -0.71
TOP3A-203ENST00000469739 AOC3Q16853 763 aa10.59□□□□□ -0.71
TOP3A-203ENST00000469739 FILIP1LQ4L180 1135 aa10.59□□□□□ -0.71
TOP3A-203ENST00000469739 C2CD5Q86YS7 1000 aa10.59□□□□□ -0.71
TOP3A-203ENST00000469739 SPATA20Q8TB22 786 aa10.59□□□□□ -0.71
TOP3A-203ENST00000469739 TDRD3Q9H7E2 651 aaKnown RBP10.59□□□□□ -0.71
TOP3A-203ENST00000469739 SNED1Q8TER0 1413 aa10.59□□□□□ -0.71
TOP3A-203ENST00000469739 CLRN2A0PK11 232 aa10.58□□□□□ -0.72
TOP3A-203ENST00000469739 KCNJ18B7U540 433 aa10.58□□□□□ -0.72
TOP3A-203ENST00000469739 AKR1B15C9JRZ8 316 aaPredicted RBP10.58□□□□□ -0.72
TOP3A-203ENST00000469739 GTPBP6O43824 516 aaPredicted RBP10.58□□□□□ -0.72
TOP3A-203ENST00000469739 OR52Z1P0C646 297 aa10.58□□□□□ -0.72
TOP3A-203ENST00000469739 PLCG2P16885 1265 aa10.58□□□□□ -0.72
TOP3A-203ENST00000469739 STK4Q13043 487 aa10.58□□□□□ -0.72
TOP3A-203ENST00000469739 KCNJ12Q14500 433 aa10.58□□□□□ -0.72
TOP3A-203ENST00000469739 RAD9BQ6WBX8 426 aa10.58□□□□□ -0.72
TOP3A-203ENST00000469739 TRMT1LQ7Z2T5 733 aaKnown RBP10.58□□□□□ -0.72
TOP3A-203ENST00000469739 NEK8Q86SG6 692 aa10.58□□□□□ -0.72
TOP3A-203ENST00000469739 TMEM139Q8IV31 216 aa10.58□□□□□ -0.72
TOP3A-203ENST00000469739 REXO1L1PQ8IX06 675 aa10.58□□□□□ -0.72
TOP3A-203ENST00000469739 SP8Q8IXZ3 490 aa10.58□□□□□ -0.72
TOP3A-203ENST00000469739 ADGRF4Q8IZF3 695 aa10.58□□□□□ -0.72
TOP3A-203ENST00000469739 TBC1D22AQ8WUA7 517 aa10.58□□□□□ -0.72
TOP3A-203ENST00000469739 KANSL2Q9H9L4 492 aa10.58□□□□□ -0.72
TOP3A-203ENST00000469739 LRRC37AA6NMS7 1700 aa10.58□□□□□ -0.72
TOP3A-203ENST00000469739 ERCC5P28715 1186 aaPredicted RBP10.58□□□□□ -0.72
TOP3A-203ENST00000469739 ETF1P62495 437 aaKnown RBP10.58□□□□□ -0.72
TOP3A-203ENST00000469739 MCM6Q14566 821 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms