RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 NUCB1Q02818 461 aa28.89■■■□□ 2.22
PTCH1-210ENST00000468211 BTNL9Q6UXG8 535 aa28.89■■■□□ 2.22
PTCH1-210ENST00000468211 ANKRD33Q7Z3H0 272 aa28.89■■■□□ 2.22
PTCH1-210ENST00000468211 NUP133Q8WUM0 1156 aa28.89■■■□□ 2.22
PTCH1-210ENST00000468211 RANBP17Q9H2T7 1088 aaKnown RBP28.89■■■□□ 2.22
PTCH1-210ENST00000468211 GPCPD1Q9NPB8 672 aa28.89■■■□□ 2.22
PTCH1-210ENST00000468211 CYP39A1Q9NYL5 469 aa28.89■■■□□ 2.22
PTCH1-210ENST00000468211 CCPG1Q9ULG6 757 aa28.89■■■□□ 2.22
PTCH1-210ENST00000468211 ASGR1P07306 291 aa28.88■■■□□ 2.21
PTCH1-210ENST00000468211 OSBPL3Q9H4L5 887 aa28.88■■■□□ 2.21
PTCH1-210ENST00000468211 ICAM1P05362 532 aa28.87■■■□□ 2.21
PTCH1-210ENST00000468211 AKNAD1Q5T1N1 836 aa28.87■■■□□ 2.21
PTCH1-210ENST00000468211 SYDE2Q5VT97 1194 aa28.87■■■□□ 2.21
PTCH1-210ENST00000468211 SLC17A8Q8NDX2 589 aa28.87■■■□□ 2.21
PTCH1-210ENST00000468211 TOX2Q96NM4 488 aa28.87■■■□□ 2.21
PTCH1-210ENST00000468211 TMEM39AQ9NV64 488 aa28.87■■■□□ 2.21
PTCH1-210ENST00000468211 STXBP5LQ9Y2K9 1186 aa28.87■■■□□ 2.21
PTCH1-210ENST00000468211 RAG1P15918 1043 aa28.86■■■□□ 2.21
PTCH1-210ENST00000468211 BEX3Q00994 111 aa28.86■■■□□ 2.21
PTCH1-210ENST00000468211 TNFAIP2Q03169 654 aa28.86■■■□□ 2.21
PTCH1-210ENST00000468211 GNASQ5JWF2 1037 aa28.86■■■□□ 2.21
PTCH1-210ENST00000468211 NSMFQ6X4W1 530 aa28.86■■■□□ 2.21
PTCH1-210ENST00000468211 FAM161BQ96MY7 647 aa28.86■■■□□ 2.21
PTCH1-210ENST00000468211 PDGFCQ9NRA1 345 aa28.86■■■□□ 2.21
PTCH1-210ENST00000468211 ASB14A6NK59 587 aa28.85■■■□□ 2.21
PTCH1-210ENST00000468211 PDHBP11177 359 aa28.85■■■□□ 2.21
PTCH1-210ENST00000468211 CDK7P50613 346 aa28.85■■■□□ 2.21
PTCH1-210ENST00000468211 TMEM63BQ5T3F8 832 aa28.85■■■□□ 2.21
PTCH1-210ENST00000468211 FAM109BQ6ICB4 259 aaPredicted RBP28.85■■■□□ 2.21
PTCH1-210ENST00000468211 MFSD6Q6ZSS7 791 aa28.85■■■□□ 2.21
PTCH1-210ENST00000468211 PCSK9Q8NBP7 692 aaKnown RBP28.85■■■□□ 2.21
PTCH1-210ENST00000468211 GLT1D1Q96MS3 346 aa28.85■■■□□ 2.21
PTCH1-210ENST00000468211 GUCD1Q96NT3 240 aa28.85■■■□□ 2.21
PTCH1-210ENST00000468211 SPC25Q9HBM1 224 aa28.85■■■□□ 2.21
PTCH1-210ENST00000468211 ELP1O95163 1332 aa28.85■■■□□ 2.21
PTCH1-210ENST00000468211 NEDD4P46934 1319 aa28.85■■■□□ 2.21
PTCH1-210ENST00000468211 DCDC2CA8MYV0 355 aa28.84■■■□□ 2.21
PTCH1-210ENST00000468211 NKX3-2P78367 333 aa28.84■■■□□ 2.21
PTCH1-210ENST00000468211 EEPD1Q7L9B9 569 aa28.84■■■□□ 2.21
PTCH1-210ENST00000468211 GNEQ9Y223 722 aaKnown RBP28.84■■■□□ 2.21
PTCH1-210ENST00000468211 NFIBO00712 420 aa28.83■■■□□ 2.21
PTCH1-210ENST00000468211 TAPT1Q6NXT6 567 aa28.83■■■□□ 2.21
PTCH1-210ENST00000468211 CWC27Q6UX04 472 aaKnown RBP28.83■■■□□ 2.21
PTCH1-210ENST00000468211 FBXO16Q8IX29 292 aaPredicted RBP28.83■■■□□ 2.21
PTCH1-210ENST00000468211 ZKSCAN3Q9BRR0 538 aa28.83■■■□□ 2.21
PTCH1-210ENST00000468211 TBX21Q9UL17 535 aa28.83■■■□□ 2.21
PTCH1-210ENST00000468211 SMPD1P17405 629 aa28.82■■■□□ 2.2
PTCH1-210ENST00000468211 BAATQ14032 418 aaPredicted RBP28.82■■■□□ 2.2
PTCH1-210ENST00000468211 NOL8Q76FK4 1167 aaKnown RBP28.82■■■□□ 2.2
PTCH1-210ENST00000468211 VTI1AQ96AJ9 217 aa28.82■■■□□ 2.2
PTCH1-210ENST00000468211 TTC14Q96N46 770 aa28.82■■■□□ 2.2
PTCH1-210ENST00000468211 SNHG28P0DPA3 235 aa28.81■■■□□ 2.2
PTCH1-210ENST00000468211 FPGSQ05932 587 aa28.81■■■□□ 2.2
PTCH1-210ENST00000468211 ZNF543Q08ER8 600 aa28.81■■■□□ 2.2
PTCH1-210ENST00000468211 A0A0C4DFX4 3053 aa28.8■■■□□ 2.2
PTCH1-210ENST00000468211 ARVCFO00192 962 aa28.8■■■□□ 2.2
PTCH1-210ENST00000468211 PCP11498 1178 aaKnown RBP28.8■■■□□ 2.2
PTCH1-210ENST00000468211 MFAP1P55081 439 aaKnown RBP28.8■■■□□ 2.2
PTCH1-210ENST00000468211 TLK2Q86UE8 772 aa28.8■■■□□ 2.2
PTCH1-210ENST00000468211 MORC4Q8TE76 937 aa28.8■■■□□ 2.2
PTCH1-210ENST00000468211 CLEC4DQ8WXI8 215 aa28.8■■■□□ 2.2
PTCH1-210ENST00000468211 A0A0U1RQG5 324 aaPredicted RBP28.79■■■□□ 2.2
PTCH1-210ENST00000468211 CXCL17Q6UXB2 119 aa28.79■■■□□ 2.2
PTCH1-210ENST00000468211 RNF41Q9H4P4 317 aaPredicted RBP28.79■■■□□ 2.2
PTCH1-210ENST00000468211 DIAPH3Q9NSV4 1193 aa28.79■■■□□ 2.2
PTCH1-210ENST00000468211 ZNF213O14771 459 aa28.78■■■□□ 2.2
PTCH1-210ENST00000468211 DYNC1LI2O43237 492 aaPredicted RBP28.78■■■□□ 2.2
PTCH1-210ENST00000468211 TIMP1P01033 207 aa28.78■■■□□ 2.2
PTCH1-210ENST00000468211 ZNF697Q5TEC3 545 aa28.78■■■□□ 2.2
PTCH1-210ENST00000468211 SLC30A10Q6XR72 485 aa28.78■■■□□ 2.2
PTCH1-210ENST00000468211 FAM126BQ8IXS8 530 aa28.78■■■□□ 2.2
PTCH1-210ENST00000468211 ESR2Q92731 530 aa28.78■■■□□ 2.2
PTCH1-210ENST00000468211 RNPC3Q96LT9 517 aaKnown RBP28.78■■■□□ 2.2
PTCH1-210ENST00000468211 CPVLQ9H3G5 476 aa28.78■■■□□ 2.2
PTCH1-210ENST00000468211 MROH7Q68CQ1 1323 aa28.77■■■□□ 2.2
PTCH1-210ENST00000468211 GOLGA8HP0CJ92 632 aa28.77■■■□□ 2.2
PTCH1-210ENST00000468211 ALDH5A1P51649 535 aaPredicted RBP28.77■■■□□ 2.2
PTCH1-210ENST00000468211 SMAD3P84022 425 aaKnown RBP28.77■■■□□ 2.2
PTCH1-210ENST00000468211 FSCN1Q16658 493 aaKnown RBP28.77■■■□□ 2.2
PTCH1-210ENST00000468211 IQSEC1Q6DN90 963 aa28.77■■■□□ 2.2
PTCH1-210ENST00000468211 GRIN2DO15399 1336 aa28.76■■■□□ 2.19
PTCH1-210ENST00000468211 PTPDC1A2A3K4 754 aa28.76■■■□□ 2.19
PTCH1-210ENST00000468211 KDM4AO75164 1064 aa28.76■■■□□ 2.19
PTCH1-210ENST00000468211 AP5M1Q9H0R1 490 aa28.76■■■□□ 2.19
PTCH1-210ENST00000468211 IL25Q9H293 177 aa28.76■■■□□ 2.19
PTCH1-210ENST00000468211 TTYH1Q9H313 450 aaPredicted RBP28.76■■■□□ 2.19
PTCH1-210ENST00000468211 VTA1Q9NP79 307 aa28.76■■■□□ 2.19
PTCH1-210ENST00000468211 MYH6P13533 1939 aa28.76■■■□□ 2.19
PTCH1-210ENST00000468211 MFSD5Q6N075 450 aa28.75■■■□□ 2.19
PTCH1-210ENST00000468211 KIAA1211Q6ZU35 1233 aa28.75■■■□□ 2.19
PTCH1-210ENST00000468211 SLC43A3Q8NBI5 491 aa28.75■■■□□ 2.19
PTCH1-210ENST00000468211 SEMA6BQ9H3T3 888 aa28.75■■■□□ 2.19
PTCH1-210ENST00000468211 CDH23Q9H251 3354 aa28.75■■■□□ 2.19
PTCH1-210ENST00000468211 B4E1Z4 1266 aa28.74■■■□□ 2.19
PTCH1-210ENST00000468211 CD4P01730 458 aa28.74■■■□□ 2.19
PTCH1-210ENST00000468211 CALML3P27482 149 aa28.74■■■□□ 2.19
PTCH1-210ENST00000468211 C16orf59Q7L2K0 433 aa28.74■■■□□ 2.19
PTCH1-210ENST00000468211 DGKHQ86XP1 1220 aa28.74■■■□□ 2.19
PTCH1-210ENST00000468211 PPP1R12CQ9BZL4 782 aa28.74■■■□□ 2.19
PTCH1-210ENST00000468211 UBA5Q9GZZ9 404 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms