RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 KIF4BQ2VIQ3 1234 aa11.54□□□□□ -0.56
MSH5-213ENST00000468136 SH3RF1Q7Z6J0 888 aa11.54□□□□□ -0.56
MSH5-213ENST00000468136 MICALL2Q8IY33 904 aa11.54□□□□□ -0.56
MSH5-213ENST00000468136 TBCKQ8TEA7 893 aa11.54□□□□□ -0.56
MSH5-213ENST00000468136 CCDC47Q96A33 483 aaKnown RBP11.54□□□□□ -0.56
MSH5-213ENST00000468136 ZNF341Q9BYN7 854 aa11.54□□□□□ -0.56
MSH5-213ENST00000468136 LRRC27Q9C0I9 530 aa11.54□□□□□ -0.56
MSH5-213ENST00000468136 AS3MTQ9HBK9 375 aa11.54□□□□□ -0.56
MSH5-213ENST00000468136 PCDHA1Q9Y5I3 950 aa11.54□□□□□ -0.56
MSH5-213ENST00000468136 PITPNM2Q9BZ72 1349 aa11.54□□□□□ -0.56
MSH5-213ENST00000468136 CYP3A7-CYP3A51PA0A087WV96 503 aa11.53□□□□□ -0.56
MSH5-213ENST00000468136 FAM196BA6NMK8 535 aa11.53□□□□□ -0.56
MSH5-213ENST00000468136 TMEM232C9JQI7 657 aa11.53□□□□□ -0.56
MSH5-213ENST00000468136 TBX3O15119 743 aa11.53□□□□□ -0.56
MSH5-213ENST00000468136 WDR46O15213 610 aaKnown RBP11.53□□□□□ -0.56
MSH5-213ENST00000468136 GTPBP6O43824 516 aaPredicted RBP11.53□□□□□ -0.56
MSH5-213ENST00000468136 CCNT1O60563 726 aaKnown RBP11.53□□□□□ -0.56
MSH5-213ENST00000468136 PTMAP06454 111 aaKnown RBP11.53□□□□□ -0.56
MSH5-213ENST00000468136 CYP3A7P24462 503 aa11.53□□□□□ -0.56
MSH5-213ENST00000468136 ERCC5P28715 1186 aaPredicted RBP11.53□□□□□ -0.56
MSH5-213ENST00000468136 AMPD3Q01432 767 aa11.53□□□□□ -0.56
MSH5-213ENST00000468136 LETM2Q2VYF4 491 aa11.53□□□□□ -0.56
MSH5-213ENST00000468136 NBPF9Q3BBW0 867 aa11.53□□□□□ -0.56
MSH5-213ENST00000468136 TTBK2Q6IQ55 1244 aa11.53□□□□□ -0.56
MSH5-213ENST00000468136 ZSCAN30Q86W11 494 aa11.53□□□□□ -0.56
MSH5-213ENST00000468136 COA7Q96BR5 231 aa11.53□□□□□ -0.56
MSH5-213ENST00000468136 MRFAP1L1Q96HT8 127 aa11.53□□□□□ -0.56
MSH5-213ENST00000468136 TMEM39BQ9GZU3 492 aa11.53□□□□□ -0.56
MSH5-213ENST00000468136 KIAA1683Q9H0B3 1180 aa11.53□□□□□ -0.56
MSH5-213ENST00000468136 MAP3K20Q9NYL2 800 aaKnown RBP11.53□□□□□ -0.56
MSH5-213ENST00000468136 SERTAD1Q9UHV2 236 aa11.53□□□□□ -0.56
MSH5-213ENST00000468136 MRPL11Q9Y3B7 192 aaKnown RBP11.53□□□□□ -0.56
MSH5-213ENST00000468136 PCDHA5Q9Y5H7 936 aa11.53□□□□□ -0.56
MSH5-213ENST00000468136 KCNA4P22459 653 aa11.52□□□□□ -0.57
MSH5-213ENST00000468136 MYL5Q02045 173 aa11.52□□□□□ -0.57
MSH5-213ENST00000468136 E2F4Q16254 413 aa11.52□□□□□ -0.57
MSH5-213ENST00000468136 CALCRLQ16602 461 aa11.52□□□□□ -0.57
MSH5-213ENST00000468136 SUPT20HL1Q3ZLR7 823 aa11.52□□□□□ -0.57
MSH5-213ENST00000468136 JAKMIP3Q5VZ66 844 aa11.52□□□□□ -0.57
MSH5-213ENST00000468136 RRAGBQ5VZM2 374 aa11.52□□□□□ -0.57
MSH5-213ENST00000468136 LUZP1Q86V48 1076 aa11.52□□□□□ -0.57
MSH5-213ENST00000468136 CLEC10AQ8IUN9 316 aa11.52□□□□□ -0.57
MSH5-213ENST00000468136 SLFN12Q8IYM2 578 aa11.52□□□□□ -0.57
MSH5-213ENST00000468136 RASGRP4Q8TDF6 673 aa11.52□□□□□ -0.57
MSH5-213ENST00000468136 DHX58Q96C10 678 aa11.52□□□□□ -0.57
MSH5-213ENST00000468136 CALML4Q96GE6 196 aa11.52□□□□□ -0.57
MSH5-213ENST00000468136 TEPSINQ96N21 525 aa11.52□□□□□ -0.57
MSH5-213ENST00000468136 WDR18Q9BV38 432 aa11.52□□□□□ -0.57
MSH5-213ENST00000468136 DEFB129Q9H1M3 183 aa11.52□□□□□ -0.57
MSH5-213ENST00000468136 RANBP17Q9H2T7 1088 aaKnown RBP11.52□□□□□ -0.57
MSH5-213ENST00000468136 CPVLQ9H3G5 476 aa11.52□□□□□ -0.57
MSH5-213ENST00000468136 DISC1Q9NRI5 854 aa11.52□□□□□ -0.57
MSH5-213ENST00000468136 GPRC5DQ9NZD1 345 aa11.52□□□□□ -0.57
MSH5-213ENST00000468136 BIN2Q9UBW5 565 aaPredicted RBP11.52□□□□□ -0.57
MSH5-213ENST00000468136 STK17AQ9UEE5 414 aa11.52□□□□□ -0.57
MSH5-213ENST00000468136 A0A1W2PRG0 241 aa11.51□□□□□ -0.57
MSH5-213ENST00000468136 SPDYE3A6NKU9 549 aa11.51□□□□□ -0.57
MSH5-213ENST00000468136 PHF20L1A8MW92 1017 aa11.51□□□□□ -0.57
MSH5-213ENST00000468136 ESPNB1AK53 854 aa11.51□□□□□ -0.57
MSH5-213ENST00000468136 CBFA2T2O43439 604 aa11.51□□□□□ -0.57
MSH5-213ENST00000468136 RAD21O60216 631 aa11.51□□□□□ -0.57
MSH5-213ENST00000468136 MSNP26038 577 aaKnown RBP11.51□□□□□ -0.57
MSH5-213ENST00000468136 SLC16A2P36021 539 aa11.51□□□□□ -0.57
MSH5-213ENST00000468136 STAT6P42226 847 aa11.51□□□□□ -0.57
MSH5-213ENST00000468136 GRIN1Q05586 938 aa11.51□□□□□ -0.57
MSH5-213ENST00000468136 PNOCQ13519 176 aa11.51□□□□□ -0.57
MSH5-213ENST00000468136 MORC3Q14149 939 aa11.51□□□□□ -0.57
MSH5-213ENST00000468136 C11orf57Q6ZUT1 292 aaPredicted RBP11.51□□□□□ -0.57
MSH5-213ENST00000468136 PLA2G4DQ86XP0 818 aa11.51□□□□□ -0.57
MSH5-213ENST00000468136 DHX40Q8IX18 779 aaKnown RBP11.51□□□□□ -0.57
MSH5-213ENST00000468136 IGSF22Q8N9C0 903 aa11.51□□□□□ -0.57
MSH5-213ENST00000468136 ENOX1Q8TC92 643 aaKnown RBP11.51□□□□□ -0.57
MSH5-213ENST00000468136 PAGE5Q96GU1 130 aa11.51□□□□□ -0.57
MSH5-213ENST00000468136 EPSTI1Q96J88 318 aa11.51□□□□□ -0.57
MSH5-213ENST00000468136 MBOAT7Q96N66 472 aa11.51□□□□□ -0.57
MSH5-213ENST00000468136 MTMR9Q96QG7 549 aa11.51□□□□□ -0.57
MSH5-213ENST00000468136 TRIM5Q9C035 493 aa11.51□□□□□ -0.57
MSH5-213ENST00000468136 ZNF112Q9UJU3 913 aa11.51□□□□□ -0.57
MSH5-213ENST00000468136 PRR12Q9ULL5 1215 aa11.51□□□□□ -0.57
MSH5-213ENST00000468136 GJA3Q9Y6H8 435 aa11.51□□□□□ -0.57
MSH5-213ENST00000468136 ABCB11O95342 1321 aa11.51□□□□□ -0.57
MSH5-213ENST00000468136 ZC3H4Q9UPT8 1303 aaKnown RBP11.51□□□□□ -0.57
MSH5-213ENST00000468136 PSDA5PKW4 1024 aaPredicted RBP11.5□□□□□ -0.57
MSH5-213ENST00000468136 C19orf81C9J6K1 198 aa11.5□□□□□ -0.57
MSH5-213ENST00000468136 PPP1R11O60927 126 aaPredicted RBP11.5□□□□□ -0.57
MSH5-213ENST00000468136 CYP3A4P08684 503 aa11.5□□□□□ -0.57
MSH5-213ENST00000468136 LMOD1P29536 600 aaPredicted RBP11.5□□□□□ -0.57
MSH5-213ENST00000468136 CIITAP33076 1130 aa11.5□□□□□ -0.57
MSH5-213ENST00000468136 ZNF75DP51815 510 aa11.5□□□□□ -0.57
MSH5-213ENST00000468136 RASSF7Q02833 373 aa11.5□□□□□ -0.57
MSH5-213ENST00000468136 DPYDQ12882 1025 aa11.5□□□□□ -0.57
MSH5-213ENST00000468136 RRP1BQ14684 758 aaKnown RBP11.5□□□□□ -0.57
MSH5-213ENST00000468136 KCNB1Q14721 858 aa11.5□□□□□ -0.57
MSH5-213ENST00000468136 DPCR1Q3MIW9 517 aa11.5□□□□□ -0.57
MSH5-213ENST00000468136 NOM1Q5C9Z4 860 aaKnown RBP11.5□□□□□ -0.57
MSH5-213ENST00000468136 ARHGAP27Q6ZUM4 889 aa11.5□□□□□ -0.57
MSH5-213ENST00000468136 PRPF38AQ8NAV1 312 aaKnown RBP11.5□□□□□ -0.57
MSH5-213ENST00000468136 RASSF8Q8NHQ8 419 aa11.5□□□□□ -0.57
MSH5-213ENST00000468136 FAM20AQ96MK3 541 aa11.5□□□□□ -0.57
MSH5-213ENST00000468136 FEZ1Q99689 392 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms