RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 STAT2P52630 851 aa6.88□□□□□ -1.31
USP39-213ENST00000467885 GTF2A2P52657 109 aa6.88□□□□□ -1.31
USP39-213ENST00000467885 INHBEP58166 350 aa6.88□□□□□ -1.31
USP39-213ENST00000467885 CCDC96Q2M329 555 aa6.88□□□□□ -1.31
USP39-213ENST00000467885 DEFB115Q30KQ5 88 aa6.88□□□□□ -1.31
USP39-213ENST00000467885 Q3C1V9 767 aa6.88□□□□□ -1.31
USP39-213ENST00000467885 KRT40Q6A162 431 aa6.88□□□□□ -1.31
USP39-213ENST00000467885 RASAL3Q86YV0 1011 aa6.88□□□□□ -1.31
USP39-213ENST00000467885 TRIM22Q8IYM9 498 aa6.88□□□□□ -1.31
USP39-213ENST00000467885 REPS2Q8NFH8 660 aa6.88□□□□□ -1.31
USP39-213ENST00000467885 TBC1D5Q92609 795 aa6.88□□□□□ -1.31
USP39-213ENST00000467885 KIFC2Q96AC6 838 aa6.88□□□□□ -1.31
USP39-213ENST00000467885 COA7Q96BR5 231 aa6.88□□□□□ -1.31
USP39-213ENST00000467885 RRP36Q96EU6 259 aaKnown RBP6.88□□□□□ -1.31
USP39-213ENST00000467885 FEZ1Q99689 392 aa6.88□□□□□ -1.31
USP39-213ENST00000467885 PHF20Q9BVI0 1012 aa6.88□□□□□ -1.31
USP39-213ENST00000467885 ASCC2Q9H1I8 757 aaPredicted RBP6.88□□□□□ -1.31
USP39-213ENST00000467885 RANBP17Q9H2T7 1088 aaKnown RBP6.88□□□□□ -1.31
USP39-213ENST00000467885 SLC38A10Q9HBR0 1119 aa6.88□□□□□ -1.31
USP39-213ENST00000467885 SH3GLB2Q9NR46 395 aa6.88□□□□□ -1.31
USP39-213ENST00000467885 BARHL2Q9NY43 387 aa6.88□□□□□ -1.31
USP39-213ENST00000467885 PPP1R9AQ9ULJ8 1098 aa6.88□□□□□ -1.31
USP39-213ENST00000467885 KCNJ14Q9UNX9 436 aa6.88□□□□□ -1.31
USP39-213ENST00000467885 MTMR6Q9Y217 621 aa6.88□□□□□ -1.31
USP39-213ENST00000467885 VPS9D1Q9Y2B5 631 aa6.88□□□□□ -1.31
USP39-213ENST00000467885 RASSF10A6NK89 507 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 M0R2N6 131 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 STXBP3O00186 592 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 OPLAHO14841 1288 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 ATP2A1O14983 1001 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 STX6O43752 255 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 EDIL3O43854 480 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 PEX10O60683 326 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 BRD1O95696 1058 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 SLC10A3P09131 477 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 FDX1P10109 184 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 U2AF2P26368 475 aaKnown RBP eCLIP6.87□□□□□ -1.31
USP39-213ENST00000467885 AKAP17AQ02040 695 aaKnown RBP6.87□□□□□ -1.31
USP39-213ENST00000467885 GUCY1B3Q02153 619 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 KIF23Q02241 960 aaPredicted RBP6.87□□□□□ -1.31
USP39-213ENST00000467885 TMEM132BQ14DG7 1078 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 QRICH1Q2TAL8 776 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 WWC2Q6AWC2 1192 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 LBX2Q6XYB7 198 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 GADL1Q6ZQY3 521 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 ANKRD23Q86SG2 305 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 FBXO11Q86XK2 927 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 FAM43AQ8N2R8 423 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 FAM184AQ8NB25 1140 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 OXER1Q8TDS5 423 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 CLEC4DQ8WXI8 215 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 WASF1Q92558 559 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 ATG4CQ96DT6 458 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 AGBL1Q96MI9 1066 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 SLF1Q9BQI6 1058 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 ZMYND12Q9H0C1 365 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 R3HDMLQ9H3Y0 253 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 CHMP5Q9NZZ3 219 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 BTBD7Q9P203 1132 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 RBM27Q9P2N5 1060 aaKnown RBP6.87□□□□□ -1.31
USP39-213ENST00000467885 AGTPBP1Q9UPW5 1226 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 SLC45A1Q9Y2W3 748 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 RIPK3Q9Y572 518 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 NAV1Q8NEY1 1877 aa6.87□□□□□ -1.31
USP39-213ENST00000467885 GREB1LQ9C091 1923 aaPredicted RBP6.86□□□□□ -1.31
USP39-213ENST00000467885 LAMA4Q16363 1823 aa6.86□□□□□ -1.31
USP39-213ENST00000467885 CCL15-CCL14A0A0B4J2E2 113 aa6.86□□□□□ -1.31
USP39-213ENST00000467885 SMCO2A6NFE2 343 aa6.86□□□□□ -1.31
USP39-213ENST00000467885 MANSC4A6NHS7 340 aaPredicted RBP6.86□□□□□ -1.31
USP39-213ENST00000467885 SPDYE16A6NNV3 312 aaPredicted RBP6.86□□□□□ -1.31
USP39-213ENST00000467885 BTBD18B2RXH4 712 aa6.86□□□□□ -1.31
USP39-213ENST00000467885 PDHXO00330 501 aa6.86□□□□□ -1.31
USP39-213ENST00000467885 MEIS2O14770 477 aa6.86□□□□□ -1.31
USP39-213ENST00000467885 ZBED4O75132 1171 aa6.86□□□□□ -1.31
USP39-213ENST00000467885 CNMDO75829 334 aa6.86□□□□□ -1.31
USP39-213ENST00000467885 FLOT1O75955 427 aa6.86□□□□□ -1.31
USP39-213ENST00000467885 ZSCAN22P10073 491 aaPredicted RBP6.86□□□□□ -1.31
USP39-213ENST00000467885 PDCP20941 246 aa6.86□□□□□ -1.31
USP39-213ENST00000467885 OSBPP22059 807 aa6.86□□□□□ -1.31
USP39-213ENST00000467885 STAT3P40763 770 aa6.86□□□□□ -1.31
USP39-213ENST00000467885 PTPN5P54829 565 aa6.86□□□□□ -1.31
USP39-213ENST00000467885 NUCB2P80303 420 aa6.86□□□□□ -1.31
USP39-213ENST00000467885 CDC37Q16543 378 aaPredicted RBP6.86□□□□□ -1.31
USP39-213ENST00000467885 CCL15Q16663 113 aa6.86□□□□□ -1.31
USP39-213ENST00000467885 CYP4F22Q6NT55 531 aa6.86□□□□□ -1.31
USP39-213ENST00000467885 HOMER1Q86YM7 354 aa6.86□□□□□ -1.31
USP39-213ENST00000467885 FAM177A1Q8N128 213 aaPredicted RBP6.86□□□□□ -1.31
USP39-213ENST00000467885 GPKOWQ92917 476 aaPredicted RBP eCLIP6.86□□□□□ -1.31
USP39-213ENST00000467885 TNFRSF25Q93038 417 aa6.86□□□□□ -1.31
USP39-213ENST00000467885 C8orf76Q96K31 380 aa6.86□□□□□ -1.31
USP39-213ENST00000467885 AMNQ9BXJ7 453 aa6.86□□□□□ -1.31
USP39-213ENST00000467885 TANGO6Q9C0B7 1094 aa6.86□□□□□ -1.31
USP39-213ENST00000467885 RAVER2Q9HCJ3 691 aaKnown RBP6.86□□□□□ -1.31
USP39-213ENST00000467885 VPS54Q9P1Q0 977 aa6.86□□□□□ -1.31
USP39-213ENST00000467885 ZNF214Q9UL59 606 aaPredicted RBP6.86□□□□□ -1.31
USP39-213ENST00000467885 ABT1Q9ULW3 272 aaKnown RBP6.86□□□□□ -1.31
USP39-213ENST00000467885 PCDHA1Q9Y5I3 950 aa6.86□□□□□ -1.31
USP39-213ENST00000467885 MYPNQ86TC9 1320 aa6.85□□□□□ -1.31
USP39-213ENST00000467885 KIF28PB7ZC32 967 aa6.85□□□□□ -1.31
USP39-213ENST00000467885 IGF2BP3O00425 579 aaKnown RBP eCLIP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms