RNA–Protein interactions for RNA: ENST00000466543.1

CYTH3-205, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-205ENST00000466543 PDGFCQ9NRA1 345 aa20.41■□□□□ 0.86
CYTH3-205ENST00000466543 GNEQ9Y223 722 aaKnown RBP20.41■□□□□ 0.86
CYTH3-205ENST00000466543 CHD9Q3L8U1 2897 aa20.4■□□□□ 0.86
CYTH3-205ENST00000466543 ARVCFO00192 962 aa20.4■□□□□ 0.86
CYTH3-205ENST00000466543 ORC4O43929 436 aa20.4■□□□□ 0.86
CYTH3-205ENST00000466543 TNFAIP2Q03169 654 aa20.4■□□□□ 0.86
CYTH3-205ENST00000466543 ALX1Q15699 326 aa20.4■□□□□ 0.86
CYTH3-205ENST00000466543 FAM126BQ8IXS8 530 aa20.4■□□□□ 0.86
CYTH3-205ENST00000466543 PCSK9Q8NBP7 692 aaKnown RBP20.4■□□□□ 0.86
CYTH3-205ENST00000466543 EVI5LQ96CN4 794 aa20.4■□□□□ 0.86
CYTH3-205ENST00000466543 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.4■□□□□ 0.86
CYTH3-205ENST00000466543 CYP39A1Q9NYL5 469 aa20.4■□□□□ 0.86
CYTH3-205ENST00000466543 GRIN2DO15399 1336 aa20.39■□□□□ 0.85
CYTH3-205ENST00000466543 FGAP02671 866 aa20.39■□□□□ 0.85
CYTH3-205ENST00000466543 SLC16A2P36021 539 aa20.39■□□□□ 0.85
CYTH3-205ENST00000466543 TKFCQ3LXA3 575 aa20.39■□□□□ 0.85
CYTH3-205ENST00000466543 CXCL17Q6UXB2 119 aa20.39■□□□□ 0.85
CYTH3-205ENST00000466543 ZNF589Q86UQ0 364 aaPredicted RBP20.39■□□□□ 0.85
CYTH3-205ENST00000466543 VTI1AQ96AJ9 217 aa20.39■□□□□ 0.85
CYTH3-205ENST00000466543 A0A0U1RQG5 324 aaPredicted RBP20.38■□□□□ 0.85
CYTH3-205ENST00000466543 SMPD1P17405 629 aa20.38■□□□□ 0.85
CYTH3-205ENST00000466543 MFSD5Q6N075 450 aa20.38■□□□□ 0.85
CYTH3-205ENST00000466543 TAPT1Q6NXT6 567 aa20.38■□□□□ 0.85
CYTH3-205ENST00000466543 EEPD1Q7L9B9 569 aa20.38■□□□□ 0.85
CYTH3-205ENST00000466543 FBXO16Q8IX29 292 aaPredicted RBP20.38■□□□□ 0.85
CYTH3-205ENST00000466543 MAFAQ8NHW3 353 aaPredicted RBP20.38■□□□□ 0.85
CYTH3-205ENST00000466543 SPC25Q9HBM1 224 aa20.38■□□□□ 0.85
CYTH3-205ENST00000466543 HELLSQ9NRZ9 838 aa20.38■□□□□ 0.85
CYTH3-205ENST00000466543 CCPG1Q9ULG6 757 aa20.38■□□□□ 0.85
CYTH3-205ENST00000466543 MROH7Q68CQ1 1323 aa20.37■□□□□ 0.85
CYTH3-205ENST00000466543 CD4P01730 458 aa20.37■□□□□ 0.85
CYTH3-205ENST00000466543 CSF2RAP15509 400 aa20.37■□□□□ 0.85
CYTH3-205ENST00000466543 HDAC1Q13547 482 aaPredicted RBP20.37■□□□□ 0.85
CYTH3-205ENST00000466543 CCDC96Q2M329 555 aa20.37■□□□□ 0.85
CYTH3-205ENST00000466543 TMEM240Q5SV17 173 aa20.37■□□□□ 0.85
CYTH3-205ENST00000466543 NOL8Q76FK4 1167 aaKnown RBP20.37■□□□□ 0.85
CYTH3-205ENST00000466543 TLK2Q86UE8 772 aa20.37■□□□□ 0.85
CYTH3-205ENST00000466543 SLC43A3Q8NBI5 491 aa20.37■□□□□ 0.85
CYTH3-205ENST00000466543 TMEM47Q9BQJ4 181 aa20.37■□□□□ 0.85
CYTH3-205ENST00000466543 PPP1R12CQ9BZL4 782 aa20.37■□□□□ 0.85
CYTH3-205ENST00000466543 RANBP17Q9H2T7 1088 aaKnown RBP20.37■□□□□ 0.85
CYTH3-205ENST00000466543 FRMPD2Q68DX3 1309 aaPredicted RBP20.36■□□□□ 0.85
CYTH3-205ENST00000466543 ASB14A6NK59 587 aa20.36■□□□□ 0.85
CYTH3-205ENST00000466543 GRXCR1A8MXD5 290 aa20.36■□□□□ 0.85
CYTH3-205ENST00000466543 NFIBO00712 420 aa20.36■□□□□ 0.85
CYTH3-205ENST00000466543 ICAM1P05362 532 aa20.36■□□□□ 0.85
CYTH3-205ENST00000466543 ACRP10323 421 aa20.36■□□□□ 0.85
CYTH3-205ENST00000466543 DNAJB2P25686 324 aa20.36■□□□□ 0.85
CYTH3-205ENST00000466543 HAND2P61296 217 aa20.36■□□□□ 0.85
CYTH3-205ENST00000466543 NMIQ13287 307 aaPredicted RBP20.36■□□□□ 0.85
CYTH3-205ENST00000466543 GRIN2CQ14957 1233 aa20.36■□□□□ 0.85
CYTH3-205ENST00000466543 RRP12Q5JTH9 1297 aaKnown RBP20.36■□□□□ 0.85
CYTH3-205ENST00000466543 PPP4R3BQ5MIZ7 849 aa20.36■□□□□ 0.85
CYTH3-205ENST00000466543 RASIP1Q5U651 963 aa20.36■□□□□ 0.85
CYTH3-205ENST00000466543 BTNL9Q6UXG8 535 aa20.36■□□□□ 0.85
CYTH3-205ENST00000466543 NSMFQ6X4W1 530 aa20.36■□□□□ 0.85
CYTH3-205ENST00000466543 DCAF4Q8WV16 495 aa20.36■□□□□ 0.85
CYTH3-205ENST00000466543 UMODL1Q5DID0 1318 aa20.35■□□□□ 0.85
CYTH3-205ENST00000466543 DYNC1LI2O43237 492 aaPredicted RBP20.35■□□□□ 0.85
CYTH3-205ENST00000466543 HSPD1P10809 573 aaKnown RBP20.35■□□□□ 0.85
CYTH3-205ENST00000466543 CYP2C18P33260 490 aa20.35■□□□□ 0.85
CYTH3-205ENST00000466543 PBX2P40425 430 aa20.35■□□□□ 0.85
CYTH3-205ENST00000466543 FSCN1Q16658 493 aaKnown RBP20.35■□□□□ 0.85
CYTH3-205ENST00000466543 MCMDC2Q4G0Z9 681 aa20.35■□□□□ 0.85
CYTH3-205ENST00000466543 TBC1D10CQ8IV04 446 aa20.35■□□□□ 0.85
CYTH3-205ENST00000466543 MORC4Q8TE76 937 aa20.35■□□□□ 0.85
CYTH3-205ENST00000466543 GPCPD1Q9NPB8 672 aa20.35■□□□□ 0.85
CYTH3-205ENST00000466543 TOMM22Q9NS69 142 aa20.35■□□□□ 0.85
CYTH3-205ENST00000466543 CHD7Q9P2D1 2997 aa20.34■□□□□ 0.85
CYTH3-205ENST00000466543 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.34■□□□□ 0.85
CYTH3-205ENST00000466543 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.34■□□□□ 0.85
CYTH3-205ENST00000466543 TOP1P11387 765 aaKnown RBP20.34■□□□□ 0.85
CYTH3-205ENST00000466543 BAATQ14032 418 aaPredicted RBP20.34■□□□□ 0.85
CYTH3-205ENST00000466543 SYDE2Q5VT97 1194 aa20.34■□□□□ 0.85
CYTH3-205ENST00000466543 CLEC4DQ8WXI8 215 aa20.34■□□□□ 0.85
CYTH3-205ENST00000466543 LNPKQ9C0E8 428 aa20.34■□□□□ 0.85
CYTH3-205ENST00000466543 FOSL2P15408 326 aa20.33■□□□□ 0.85
CYTH3-205ENST00000466543 PSMC6P62333 389 aa20.33■□□□□ 0.85
CYTH3-205ENST00000466543 PPIGQ13427 754 aaKnown RBP eCLIP20.33■□□□□ 0.85
CYTH3-205ENST00000466543 SLC30A10Q6XR72 485 aa20.33■□□□□ 0.85
CYTH3-205ENST00000466543 ZNF365Q70YC5 407 aa20.33■□□□□ 0.85
CYTH3-205ENST00000466543 TCP11L1Q9NUJ3 509 aa20.33■□□□□ 0.85
CYTH3-205ENST00000466543 GBF1Q92538 1859 aa20.33■□□□□ 0.84
CYTH3-205ENST00000466543 ZMYM6O95789 1325 aa20.32■□□□□ 0.84
CYTH3-205ENST00000466543 TMEM265A0A087WTH1 108 aa20.32■□□□□ 0.84
CYTH3-205ENST00000466543 PDHBP11177 359 aa20.32■□□□□ 0.84
CYTH3-205ENST00000466543 ITGA7Q13683 1181 aa20.32■□□□□ 0.84
CYTH3-205ENST00000466543 IQSEC1Q6DN90 963 aa20.32■□□□□ 0.84
CYTH3-205ENST00000466543 USP38Q8NB14 1042 aa20.32■□□□□ 0.84
CYTH3-205ENST00000466543 AP5M1Q9H0R1 490 aa20.32■□□□□ 0.84
CYTH3-205ENST00000466543 TRPV6Q9H1D0 765 aa20.32■□□□□ 0.84
CYTH3-205ENST00000466543 ZBTB47Q9UFB7 747 aaPredicted RBP20.32■□□□□ 0.84
CYTH3-205ENST00000466543 CCDC171Q6TFL3 1326 aa20.31■□□□□ 0.84
CYTH3-205ENST00000466543 ALDH5A1P51649 535 aaPredicted RBP20.31■□□□□ 0.84
CYTH3-205ENST00000466543 KIAA1211Q6ZU35 1233 aa20.31■□□□□ 0.84
CYTH3-205ENST00000466543 TMEM199Q8N511 208 aa20.31■□□□□ 0.84
CYTH3-205ENST00000466543 TIFAQ96CG3 184 aa20.31■□□□□ 0.84
CYTH3-205ENST00000466543 VWCEQ96DN2 955 aa20.31■□□□□ 0.84
CYTH3-205ENST00000466543 PBX4Q9BYU1 374 aa20.31■□□□□ 0.84
CYTH3-205ENST00000466543 ZNF576Q9H609 170 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms