RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 PLEKHA8P1O95397 391 aa13.98□□□□□ -0.17
SHROOM3-202ENST00000466541 HOXC6P09630 235 aa13.98□□□□□ -0.17
SHROOM3-202ENST00000466541 CALM1P0DP23 149 aa13.98□□□□□ -0.17
SHROOM3-202ENST00000466541 CALM2P0DP24 149 aa13.98□□□□□ -0.17
SHROOM3-202ENST00000466541 CALM3P0DP25 149 aa13.98□□□□□ -0.17
SHROOM3-202ENST00000466541 EN2P19622 333 aaPredicted RBP13.98□□□□□ -0.17
SHROOM3-202ENST00000466541 CNTN2Q02246 1040 aa13.98□□□□□ -0.17
SHROOM3-202ENST00000466541 SLC35G1Q2M3R5 365 aa13.98□□□□□ -0.17
SHROOM3-202ENST00000466541 C8orf34Q49A92 452 aa13.98□□□□□ -0.17
SHROOM3-202ENST00000466541 PRAMEF19Q5SWL8 479 aa13.98□□□□□ -0.17
SHROOM3-202ENST00000466541 APOA5Q6Q788 366 aa13.98□□□□□ -0.17
SHROOM3-202ENST00000466541 RUFY3Q7L099 469 aa13.98□□□□□ -0.17
SHROOM3-202ENST00000466541 FBXO11Q86XK2 927 aa13.98□□□□□ -0.17
SHROOM3-202ENST00000466541 FANCBQ8NB91 859 aa13.98□□□□□ -0.17
SHROOM3-202ENST00000466541 MAML3Q96JK9 1138 aa13.98□□□□□ -0.17
SHROOM3-202ENST00000466541 DEFB118Q96PH6 123 aa13.98□□□□□ -0.17
SHROOM3-202ENST00000466541 PURBQ96QR8 312 aaKnown RBP13.98□□□□□ -0.17
SHROOM3-202ENST00000466541 A1CFQ9NQ94 594 aaKnown RBP13.98□□□□□ -0.17
SHROOM3-202ENST00000466541 ZNF236Q9UL36 1845 aa13.98□□□□□ -0.17
SHROOM3-202ENST00000466541 MCM3APO60318 1980 aa13.98□□□□□ -0.17
SHROOM3-202ENST00000466541 hCG_1642624A0A1W2PR95 340 aa13.97□□□□□ -0.17
SHROOM3-202ENST00000466541 GOLGA8AA7E2F4 631 aa13.97□□□□□ -0.17
SHROOM3-202ENST00000466541 GOLGA8BA8MQT2 603 aa13.97□□□□□ -0.17
SHROOM3-202ENST00000466541 EIF5BO60841 1220 aaKnown RBP13.97□□□□□ -0.17
SHROOM3-202ENST00000466541 CALML3P27482 149 aa13.97□□□□□ -0.17
SHROOM3-202ENST00000466541 CCND3P30281 292 aaPredicted RBP13.97□□□□□ -0.17
SHROOM3-202ENST00000466541 BAATQ14032 418 aaPredicted RBP13.97□□□□□ -0.17
SHROOM3-202ENST00000466541 ZNF792Q3KQV3 632 aa13.97□□□□□ -0.17
SHROOM3-202ENST00000466541 SGMS1Q86VZ5 419 aa13.97□□□□□ -0.17
SHROOM3-202ENST00000466541 SRBD1Q8N5C6 995 aaKnown RBP13.97□□□□□ -0.17
SHROOM3-202ENST00000466541 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.97□□□□□ -0.17
SHROOM3-202ENST00000466541 ZSWIM6Q9HCJ5 1215 aa13.97□□□□□ -0.17
SHROOM3-202ENST00000466541 HMX1Q9NP08 348 aaPredicted RBP13.97□□□□□ -0.17
SHROOM3-202ENST00000466541 PDRG1Q9NUG6 133 aa13.97□□□□□ -0.17
SHROOM3-202ENST00000466541 DDX49Q9Y6V7 483 aaKnown RBP13.97□□□□□ -0.17
SHROOM3-202ENST00000466541 PFASO15067 1338 aa13.96□□□□□ -0.17
SHROOM3-202ENST00000466541 ABCB11O95342 1321 aa13.96□□□□□ -0.17
SHROOM3-202ENST00000466541 RPTORQ8N122 1335 aa13.96□□□□□ -0.17
SHROOM3-202ENST00000466541 ZBTB5O15062 677 aa13.96□□□□□ -0.17
SHROOM3-202ENST00000466541 CYTH3O43739 400 aa13.96□□□□□ -0.17
SHROOM3-202ENST00000466541 TFRCP02786 760 aaKnown RBP13.96□□□□□ -0.17
SHROOM3-202ENST00000466541 GNAQP50148 359 aa13.96□□□□□ -0.17
SHROOM3-202ENST00000466541 RTN1Q16799 776 aa13.96□□□□□ -0.17
SHROOM3-202ENST00000466541 CLEC4DQ8WXI8 215 aa13.96□□□□□ -0.17
SHROOM3-202ENST00000466541 RRP36Q96EU6 259 aaKnown RBP13.96□□□□□ -0.17
SHROOM3-202ENST00000466541 MAP3K14Q99558 947 aa13.96□□□□□ -0.17
SHROOM3-202ENST00000466541 TINF2Q9BSI4 451 aa13.96□□□□□ -0.17
SHROOM3-202ENST00000466541 AMNQ9BXJ7 453 aa13.96□□□□□ -0.17
SHROOM3-202ENST00000466541 RIOX1Q9H6W3 641 aa13.96□□□□□ -0.17
SHROOM3-202ENST00000466541 CYP39A1Q9NYL5 469 aa13.96□□□□□ -0.17
SHROOM3-202ENST00000466541 PNMA2Q9UL42 364 aa13.96□□□□□ -0.17
SHROOM3-202ENST00000466541 PCDHA1Q9Y5I3 950 aa13.96□□□□□ -0.17
SHROOM3-202ENST00000466541 PPP1R11O60927 126 aaPredicted RBP13.95□□□□□ -0.18
SHROOM3-202ENST00000466541 MYCNP04198 464 aaPredicted RBP13.95□□□□□ -0.18
SHROOM3-202ENST00000466541 METAP2P50579 478 aaKnown RBP eCLIP13.95□□□□□ -0.18
SHROOM3-202ENST00000466541 ANO1Q5XXA6 986 aa13.95□□□□□ -0.18
SHROOM3-202ENST00000466541 OLFML2BQ68BL8 750 aa13.95□□□□□ -0.18
SHROOM3-202ENST00000466541 SLC30A10Q6XR72 485 aa13.95□□□□□ -0.18
SHROOM3-202ENST00000466541 RNF207Q6ZRF8 634 aa13.95□□□□□ -0.18
SHROOM3-202ENST00000466541 NOL8Q76FK4 1167 aaKnown RBP13.95□□□□□ -0.18
SHROOM3-202ENST00000466541 TRPV1Q8NER1 839 aa13.95□□□□□ -0.18
SHROOM3-202ENST00000466541 TBC1D5Q92609 795 aa13.95□□□□□ -0.18
SHROOM3-202ENST00000466541 LZTS2Q9BRK4 669 aa13.95□□□□□ -0.18
SHROOM3-202ENST00000466541 SEC63Q9UGP8 760 aaKnown RBP13.95□□□□□ -0.18
SHROOM3-202ENST00000466541 MRPL11Q9Y3B7 192 aaKnown RBP13.95□□□□□ -0.18
SHROOM3-202ENST00000466541 BRCA2P51587 3418 aa13.94□□□□□ -0.18
SHROOM3-202ENST00000466541 DNAJC25-GNG10A0A024R161 153 aa13.94□□□□□ -0.18
SHROOM3-202ENST00000466541 PNMA6FA0A0J9YX94 578 aa13.94□□□□□ -0.18
SHROOM3-202ENST00000466541 SOWAHBA6NEL2 793 aa13.94□□□□□ -0.18
SHROOM3-202ENST00000466541 PPFIA3O75145 1194 aa13.94□□□□□ -0.18
SHROOM3-202ENST00000466541 CFBP00751 764 aa13.94□□□□□ -0.18
SHROOM3-202ENST00000466541 RPS6P62753 249 aaKnown RBP13.94□□□□□ -0.18
SHROOM3-202ENST00000466541 CCT2P78371 535 aaKnown RBP13.94□□□□□ -0.18
SHROOM3-202ENST00000466541 STK3Q13188 491 aa13.94□□□□□ -0.18
SHROOM3-202ENST00000466541 TMTC3Q6ZXV5 915 aa13.94□□□□□ -0.18
SHROOM3-202ENST00000466541 U2AF1L4Q8WU68 220 aaKnown RBP13.94□□□□□ -0.18
SHROOM3-202ENST00000466541 MTMR8Q96EF0 704 aa13.94□□□□□ -0.18
SHROOM3-202ENST00000466541 SPZ1Q9BXG8 430 aa13.94□□□□□ -0.18
SHROOM3-202ENST00000466541 TM6SF1Q9BZW5 370 aa13.94□□□□□ -0.18
SHROOM3-202ENST00000466541 ZHX1Q9UKY1 873 aaPredicted RBP13.94□□□□□ -0.18
SHROOM3-202ENST00000466541 CNPY2Q9Y2B0 182 aa13.94□□□□□ -0.18
SHROOM3-202ENST00000466541 DIS3Q9Y2L1 958 aaKnown RBP13.94□□□□□ -0.18
SHROOM3-202ENST00000466541 LCTP09848 1927 aa13.94□□□□□ -0.18
SHROOM3-202ENST00000466541 GJB1P08034 283 aa13.93□□□□□ -0.18
SHROOM3-202ENST00000466541 CDC27P30260 824 aa13.93□□□□□ -0.18
SHROOM3-202ENST00000466541 ADD1P35611 737 aaKnown RBP13.93□□□□□ -0.18
SHROOM3-202ENST00000466541 TOB2Q14106 344 aaPredicted RBP13.93□□□□□ -0.18
SHROOM3-202ENST00000466541 MAP3K21Q5TCX8 1036 aa13.93□□□□□ -0.18
SHROOM3-202ENST00000466541 EEPD1Q7L9B9 569 aa13.93□□□□□ -0.18
SHROOM3-202ENST00000466541 FAM133AQ8N9E0 248 aa13.93□□□□□ -0.18
SHROOM3-202ENST00000466541 FGD4Q96M96 766 aa13.93□□□□□ -0.18
SHROOM3-202ENST00000466541 NCOA5Q9HCD5 579 aaKnown RBP13.93□□□□□ -0.18
SHROOM3-202ENST00000466541 PAK6Q9NQU5 681 aaPredicted RBP13.93□□□□□ -0.18
SHROOM3-202ENST00000466541 RBM28Q9NW13 759 aaKnown RBP13.93□□□□□ -0.18
SHROOM3-202ENST00000466541 RBBP6Q7Z6E9 1792 aaKnown RBP13.93□□□□□ -0.18
SHROOM3-202ENST00000466541 SGPL1O95470 568 aa13.92□□□□□ -0.18
SHROOM3-202ENST00000466541 SNAI1O95863 264 aaPredicted RBP13.92□□□□□ -0.18
SHROOM3-202ENST00000466541 CYBAP13498 195 aa13.92□□□□□ -0.18
SHROOM3-202ENST00000466541 HOXA13P31271 388 aaPredicted RBP13.92□□□□□ -0.18
SHROOM3-202ENST00000466541 ANAPC15P60006 121 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms