RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 RPTNQ6XPR3 784 aa6.61□□□□□ -1.35
VPS8-217ENST00000465213 SYT8Q8NBV8 401 aa6.61□□□□□ -1.35
VPS8-217ENST00000465213 DHRS1Q96LJ7 313 aa6.61□□□□□ -1.35
VPS8-217ENST00000465213 PWWP2AQ96N64 755 aa6.61□□□□□ -1.35
VPS8-217ENST00000465213 CCSER2Q9H7U1 834 aa6.61□□□□□ -1.35
VPS8-217ENST00000465213 GFOD1Q9NXC2 390 aa6.61□□□□□ -1.35
VPS8-217ENST00000465213 SUCOQ9UBS9 1254 aaKnown RBP6.61□□□□□ -1.35
VPS8-217ENST00000465213 PCDHB12Q9Y5F1 795 aa6.61□□□□□ -1.35
VPS8-217ENST00000465213 C9IYK1 514 aa6.6□□□□□ -1.35
VPS8-217ENST00000465213 BUB1BO60566 1050 aaPredicted RBP6.6□□□□□ -1.35
VPS8-217ENST00000465213 IGSF3O75054 1194 aa6.6□□□□□ -1.35
VPS8-217ENST00000465213 ADRB1P08588 477 aa6.6□□□□□ -1.35
VPS8-217ENST00000465213 TCF3P15923 654 aa6.6□□□□□ -1.35
VPS8-217ENST00000465213 GUCY2CP25092 1073 aa6.6□□□□□ -1.35
VPS8-217ENST00000465213 GIPRP48546 466 aa6.6□□□□□ -1.35
VPS8-217ENST00000465213 MAPKAPK2P49137 400 aa6.6□□□□□ -1.35
VPS8-217ENST00000465213 NASPP49321 788 aaPredicted RBP6.6□□□□□ -1.35
VPS8-217ENST00000465213 RBM25P49756 843 aaKnown RBP6.6□□□□□ -1.35
VPS8-217ENST00000465213 NR1I3Q14994 352 aa6.6□□□□□ -1.35
VPS8-217ENST00000465213 PLEKHN1Q494U1 663 aaPredicted RBP6.6□□□□□ -1.35
VPS8-217ENST00000465213 UNC5AQ6ZN44 842 aa6.6□□□□□ -1.35
VPS8-217ENST00000465213 TMEM52Q8NDY8 209 aa6.6□□□□□ -1.35
VPS8-217ENST00000465213 NUP43Q8NFH3 380 aa6.6□□□□□ -1.35
VPS8-217ENST00000465213 BORCS6Q96GS4 357 aa6.6□□□□□ -1.35
VPS8-217ENST00000465213 JMJD8Q96S16 334 aa6.6□□□□□ -1.35
VPS8-217ENST00000465213 CDADC1Q9BWV3 514 aa6.6□□□□□ -1.35
VPS8-217ENST00000465213 IMPACTQ9P2X3 320 aa6.6□□□□□ -1.35
VPS8-217ENST00000465213 INPP5FQ9Y2H2 1132 aa6.6□□□□□ -1.35
VPS8-217ENST00000465213 NUDT19A8MXV4 375 aa6.59□□□□□ -1.35
VPS8-217ENST00000465213 ERCC5P28715 1186 aaPredicted RBP6.59□□□□□ -1.35
VPS8-217ENST00000465213 PMS1P54277 932 aaKnown RBP6.59□□□□□ -1.35
VPS8-217ENST00000465213 EIF6P56537 245 aaKnown RBP6.59□□□□□ -1.35
VPS8-217ENST00000465213 EFEMP1Q12805 493 aa6.59□□□□□ -1.35
VPS8-217ENST00000465213 AUHQ13825 339 aaKnown RBP6.59□□□□□ -1.35
VPS8-217ENST00000465213 RTP2Q5QGT7 225 aa6.59□□□□□ -1.35
VPS8-217ENST00000465213 ZDHHC14Q8IZN3 488 aa6.59□□□□□ -1.35
VPS8-217ENST00000465213 SHDQ96IW2 340 aa6.59□□□□□ -1.35
VPS8-217ENST00000465213 SEC16BQ96JE7 1060 aa6.59□□□□□ -1.35
VPS8-217ENST00000465213 PUS7Q96PZ0 661 aaKnown RBP6.59□□□□□ -1.35
VPS8-217ENST00000465213 CRBNQ96SW2 442 aa6.59□□□□□ -1.35
VPS8-217ENST00000465213 SRRTQ9BXP5 876 aaKnown RBP6.59□□□□□ -1.35
VPS8-217ENST00000465213 MKRN2Q9H000 416 aaKnown RBP6.59□□□□□ -1.35
VPS8-217ENST00000465213 AP5S1Q9NUS5 200 aa6.59□□□□□ -1.35
VPS8-217ENST00000465213 LTBP3Q9NS15 1303 aa6.58□□□□□ -1.36
VPS8-217ENST00000465213 FFAR3O14843 346 aa6.58□□□□□ -1.36
VPS8-217ENST00000465213 SHOXO15266 292 aa6.58□□□□□ -1.36
VPS8-217ENST00000465213 GSNP06396 782 aa6.58□□□□□ -1.36
VPS8-217ENST00000465213 FBLN1P23142 703 aa6.58□□□□□ -1.36
VPS8-217ENST00000465213 CRTC3Q6UUV7 619 aa6.58□□□□□ -1.36
VPS8-217ENST00000465213 GGNQ86UU5 652 aa6.58□□□□□ -1.36
VPS8-217ENST00000465213 PPFIBP1Q86W92 1011 aa6.58□□□□□ -1.36
VPS8-217ENST00000465213 NLGN1Q8N2Q7 840 aa6.58□□□□□ -1.36
VPS8-217ENST00000465213 MEIS1O00470 390 aa6.57□□□□□ -1.36
VPS8-217ENST00000465213 SRGAP3O43295 1099 aa6.57□□□□□ -1.36
VPS8-217ENST00000465213 MVKQ03426 396 aa6.57□□□□□ -1.36
VPS8-217ENST00000465213 SPATS1Q496A3 300 aa6.57□□□□□ -1.36
VPS8-217ENST00000465213 AXDND1Q5T1B0 1012 aaPredicted RBP6.57□□□□□ -1.36
VPS8-217ENST00000465213 TDRD10Q5VZ19 366 aaKnown RBP6.57□□□□□ -1.36
VPS8-217ENST00000465213 ZC3H14Q6PJT7 736 aaKnown RBP6.57□□□□□ -1.36
VPS8-217ENST00000465213 KRTAP17-1Q9BYP8 105 aa6.57□□□□□ -1.36
VPS8-217ENST00000465213 ADAM7Q9H2U9 754 aa6.57□□□□□ -1.36
VPS8-217ENST00000465213 FBXL21Q9UKT6 434 aa6.57□□□□□ -1.36
VPS8-217ENST00000465213 ZNF214Q9UL59 606 aaPredicted RBP6.57□□□□□ -1.36
VPS8-217ENST00000465213 PFKLP17858 780 aa6.56□□□□□ -1.36
VPS8-217ENST00000465213 ATF4P18848 351 aaPredicted RBP6.56□□□□□ -1.36
VPS8-217ENST00000465213 NCKAP1LP55160 1127 aa6.56□□□□□ -1.36
VPS8-217ENST00000465213 ANKRD39Q53RE8 183 aa6.56□□□□□ -1.36
VPS8-217ENST00000465213 ZFYVE27Q5T4F4 411 aa6.56□□□□□ -1.36
VPS8-217ENST00000465213 HLA-DQA1Q5Y7H0 255 aa6.56□□□□□ -1.36
VPS8-217ENST00000465213 CCDC144CPQ8IYA2 1237 aa6.56□□□□□ -1.36
VPS8-217ENST00000465213 C7orf61Q8IZ16 206 aa6.56□□□□□ -1.36
VPS8-217ENST00000465213 OR6P1Q8NGX9 317 aa6.56□□□□□ -1.36
VPS8-217ENST00000465213 SLC12A9Q9BXP2 914 aa6.56□□□□□ -1.36
VPS8-217ENST00000465213 IGSF5Q9NSI5 407 aa6.56□□□□□ -1.36
VPS8-217ENST00000465213 CNOT11Q9UKZ1 510 aaKnown RBP6.56□□□□□ -1.36
VPS8-217ENST00000465213 A0A1W2PQH9 124 aa6.55□□□□□ -1.36
VPS8-217ENST00000465213 TP53P04637 393 aaPredicted RBP6.55□□□□□ -1.36
VPS8-217ENST00000465213 CYBBP04839 570 aa6.55□□□□□ -1.36
VPS8-217ENST00000465213 MSL3P1P0C860 447 aa6.55□□□□□ -1.36
VPS8-217ENST00000465213 SLURP1P55000 103 aa6.55□□□□□ -1.36
VPS8-217ENST00000465213 ZNF200P98182 395 aaPredicted RBP6.55□□□□□ -1.36
VPS8-217ENST00000465213 TARBP2Q15633 366 aaKnown RBP6.55□□□□□ -1.36
VPS8-217ENST00000465213 VWA3BQ502W6 1294 aa6.55□□□□□ -1.36
VPS8-217ENST00000465213 DCAF15Q66K64 600 aa6.55□□□□□ -1.36
VPS8-217ENST00000465213 PAQR3Q6TCH7 311 aa6.55□□□□□ -1.36
VPS8-217ENST00000465213 FAM169BQ8N8A8 192 aa6.55□□□□□ -1.36
VPS8-217ENST00000465213 C19orf47Q8N9M1 422 aaKnown RBP6.55□□□□□ -1.36
VPS8-217ENST00000465213 CPLX3Q8WVH0 158 aa6.55□□□□□ -1.36
VPS8-217ENST00000465213 FAM86C1Q9NVL1 165 aa6.55□□□□□ -1.36
VPS8-217ENST00000465213 DBHP09172 617 aa6.54□□□□□ -1.36
VPS8-217ENST00000465213 LIMS1P48059 325 aa6.54□□□□□ -1.36
VPS8-217ENST00000465213 KCNC1P48547 511 aa6.54□□□□□ -1.36
VPS8-217ENST00000465213 CYP2R1Q6VVX0 501 aa6.54□□□□□ -1.36
VPS8-217ENST00000465213 SMARCC1Q92922 1105 aaPredicted RBP6.54□□□□□ -1.36
VPS8-217ENST00000465213 CORO7P57737 925 aa6.53□□□□□ -1.36
VPS8-217ENST00000465213 HTRA3P83110 453 aa6.53□□□□□ -1.36
VPS8-217ENST00000465213 NAT16Q8N8M0 369 aa6.53□□□□□ -1.36
VPS8-217ENST00000465213 DSCC1Q9BVC3 393 aa6.53□□□□□ -1.36
VPS8-217ENST00000465213 RNF38Q9H0F5 515 aa6.53□□□□□ -1.36
VPS8-217ENST00000465213 CAPN10Q9HC96 672 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms