RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 ASB14A6NK59 587 aa12.94□□□□□ -0.34
CBX3-205ENST00000462165 HAX1O00165 279 aa12.94□□□□□ -0.34
CBX3-205ENST00000462165 TTLL1O95922 423 aa12.94□□□□□ -0.34
CBX3-205ENST00000462165 BMP3P12645 472 aa12.94□□□□□ -0.34
CBX3-205ENST00000462165 ITGA7Q13683 1181 aa12.94□□□□□ -0.34
CBX3-205ENST00000462165 CXCL17Q6UXB2 119 aa12.94□□□□□ -0.34
CBX3-205ENST00000462165 TLK2Q86UE8 772 aa12.94□□□□□ -0.34
CBX3-205ENST00000462165 LRRC47Q8N1G4 583 aaKnown RBP12.94□□□□□ -0.34
CBX3-205ENST00000462165 APPBP2Q92624 585 aa12.94□□□□□ -0.34
CBX3-205ENST00000462165 OSBP2Q969R2 916 aa12.94□□□□□ -0.34
CBX3-205ENST00000462165 LRRCC1Q9C099 1032 aa12.94□□□□□ -0.34
CBX3-205ENST00000462165 EPB41L4AQ9HCS5 686 aaPredicted RBP12.94□□□□□ -0.34
CBX3-205ENST00000462165 A1CFQ9NQ94 594 aaKnown RBP12.94□□□□□ -0.34
CBX3-205ENST00000462165 HOMER2Q9NSB8 354 aa12.94□□□□□ -0.34
CBX3-205ENST00000462165 COG6Q9Y2V7 657 aa12.94□□□□□ -0.34
CBX3-205ENST00000462165 ZNF536O15090 1300 aa12.93□□□□□ -0.34
CBX3-205ENST00000462165 SOWAHBA6NEL2 793 aa12.93□□□□□ -0.34
CBX3-205ENST00000462165 ZEB2O60315 1214 aa12.93□□□□□ -0.34
CBX3-205ENST00000462165 PRDM1O75626 825 aa12.93□□□□□ -0.34
CBX3-205ENST00000462165 GNAT2P19087 354 aa12.93□□□□□ -0.34
CBX3-205ENST00000462165 STAT2P52630 851 aa12.93□□□□□ -0.34
CBX3-205ENST00000462165 CCL23P55773 120 aa12.93□□□□□ -0.34
CBX3-205ENST00000462165 MKRN4PQ13434 485 aaPredicted RBP12.93□□□□□ -0.34
CBX3-205ENST00000462165 FSCN1Q16658 493 aaKnown RBP12.93□□□□□ -0.34
CBX3-205ENST00000462165 TKFCQ3LXA3 575 aa12.93□□□□□ -0.34
CBX3-205ENST00000462165 SLFN13Q68D06 897 aa12.93□□□□□ -0.34
CBX3-205ENST00000462165 NOL8Q76FK4 1167 aaKnown RBP12.93□□□□□ -0.34
CBX3-205ENST00000462165 OTOP2Q7RTS6 562 aa12.93□□□□□ -0.34
CBX3-205ENST00000462165 RPUSD2Q8IZ73 545 aaKnown RBP12.93□□□□□ -0.34
CBX3-205ENST00000462165 KBTBD3Q8NAB2 608 aa12.93□□□□□ -0.34
CBX3-205ENST00000462165 NOC4LQ9BVI4 516 aaKnown RBP12.93□□□□□ -0.34
CBX3-205ENST00000462165 WNT8AQ9H1J5 351 aa12.93□□□□□ -0.34
CBX3-205ENST00000462165 TSPYL2Q9H2G4 693 aaPredicted RBP12.93□□□□□ -0.34
CBX3-205ENST00000462165 CHMP4BQ9H444 224 aaKnown RBP12.93□□□□□ -0.34
CBX3-205ENST00000462165 RAPGEFL1Q9UHV5 662 aa12.93□□□□□ -0.34
CBX3-205ENST00000462165 Q9Y3F1 56 aa12.93□□□□□ -0.34
CBX3-205ENST00000462165 TMEM232C9JQI7 657 aa12.92□□□□□ -0.34
CBX3-205ENST00000462165 DYNC1LI2O43237 492 aaPredicted RBP12.92□□□□□ -0.34
CBX3-205ENST00000462165 GPAA1O43292 621 aa12.92□□□□□ -0.34
CBX3-205ENST00000462165 B4GALT4O60513 344 aa12.92□□□□□ -0.34
CBX3-205ENST00000462165 PLA2G6O60733 806 aa12.92□□□□□ -0.34
CBX3-205ENST00000462165 SMPD1P17405 629 aa12.92□□□□□ -0.34
CBX3-205ENST00000462165 SCN5AQ14524 2016 aa12.92□□□□□ -0.34
CBX3-205ENST00000462165 FAM160B2Q86V87 743 aa12.92□□□□□ -0.34
CBX3-205ENST00000462165 IL27Q8NEV9 243 aa12.92□□□□□ -0.34
CBX3-205ENST00000462165 NEDD1Q8NHV4 660 aa12.92□□□□□ -0.34
CBX3-205ENST00000462165 CHURC1Q8WUH1 139 aa12.92□□□□□ -0.34
CBX3-205ENST00000462165 VWCEQ96DN2 955 aa12.92□□□□□ -0.34
CBX3-205ENST00000462165 GMCL1Q96IK5 515 aa12.92□□□□□ -0.34
CBX3-205ENST00000462165 AGBL1Q96MI9 1066 aa12.92□□□□□ -0.34
CBX3-205ENST00000462165 AP5M1Q9H0R1 490 aa12.92□□□□□ -0.34
CBX3-205ENST00000462165 TRPV6Q9H1D0 765 aa12.92□□□□□ -0.34
CBX3-205ENST00000462165 ECHDC1Q9NTX5 307 aa12.92□□□□□ -0.34
CBX3-205ENST00000462165 RNF146Q9NTX7 359 aa12.92□□□□□ -0.34
CBX3-205ENST00000462165 PCDHA11Q9Y5I1 949 aa12.92□□□□□ -0.34
CBX3-205ENST00000462165 SLC4A7Q9Y6M7 1214 aa12.92□□□□□ -0.34
CBX3-205ENST00000462165 PATL2C9JE40 543 aaKnown RBP12.91□□□□□ -0.34
CBX3-205ENST00000462165 RNF113AO15541 343 aaKnown RBP12.91□□□□□ -0.34
CBX3-205ENST00000462165 SMARCA5O60264 1052 aaPredicted RBP12.91□□□□□ -0.34
CBX3-205ENST00000462165 TSPY3P0CV98 308 aa12.91□□□□□ -0.34
CBX3-205ENST00000462165 TSPY8P0CW00 308 aa12.91□□□□□ -0.34
CBX3-205ENST00000462165 TDO2P48775 406 aa12.91□□□□□ -0.34
CBX3-205ENST00000462165 RABGGTBP53611 331 aa12.91□□□□□ -0.34
CBX3-205ENST00000462165 PPP2R2DQ66LE6 453 aa12.91□□□□□ -0.34
CBX3-205ENST00000462165 IQSEC1Q6DN90 963 aa12.91□□□□□ -0.34
CBX3-205ENST00000462165 TAPT1Q6NXT6 567 aa12.91□□□□□ -0.34
CBX3-205ENST00000462165 STAG1Q8WVM7 1258 aa12.91□□□□□ -0.34
CBX3-205ENST00000462165 TRERF1Q96PN7 1200 aa12.91□□□□□ -0.34
CBX3-205ENST00000462165 M0R2C6 588 aa12.9□□□□□ -0.34
CBX3-205ENST00000462165 ZFYP08048 801 aaPredicted RBP12.9□□□□□ -0.34
CBX3-205ENST00000462165 PFKMP08237 780 aa12.9□□□□□ -0.34
CBX3-205ENST00000462165 BMP1P13497 986 aa12.9□□□□□ -0.34
CBX3-205ENST00000462165 PTGS1P23219 599 aa12.9□□□□□ -0.34
CBX3-205ENST00000462165 PDE4BQ07343 736 aa12.9□□□□□ -0.34
CBX3-205ENST00000462165 IFNL3Q8IZI9 196 aa12.9□□□□□ -0.34
CBX3-205ENST00000462165 MORC4Q8TE76 937 aa12.9□□□□□ -0.34
CBX3-205ENST00000462165 VTA1Q9NP79 307 aa12.9□□□□□ -0.34
CBX3-205ENST00000462165 PDGFCQ9NRA1 345 aa12.9□□□□□ -0.34
CBX3-205ENST00000462165 CYP39A1Q9NYL5 469 aa12.9□□□□□ -0.34
CBX3-205ENST00000462165 TANC1Q9C0D5 1861 aa12.89□□□□□ -0.35
CBX3-205ENST00000462165 SCN10AQ9Y5Y9 1956 aa12.89□□□□□ -0.35
CBX3-205ENST00000462165 APPP05067 770 aa12.89□□□□□ -0.35
CBX3-205ENST00000462165 ALAS1P13196 640 aa12.89□□□□□ -0.35
CBX3-205ENST00000462165 MYOGP15173 224 aa12.89□□□□□ -0.35
CBX3-205ENST00000462165 ATP2A2P16615 1042 aaKnown RBP12.89□□□□□ -0.35
CBX3-205ENST00000462165 POU3F3P20264 500 aaPredicted RBP12.89□□□□□ -0.35
CBX3-205ENST00000462165 PLA2G5P39877 138 aa12.89□□□□□ -0.35
CBX3-205ENST00000462165 SLC1A4P43007 532 aa12.89□□□□□ -0.35
CBX3-205ENST00000462165 PSMC6P62333 389 aa12.89□□□□□ -0.35
CBX3-205ENST00000462165 TFAP4Q01664 338 aa12.89□□□□□ -0.35
CBX3-205ENST00000462165 AAK1Q2M2I8 961 aa12.89□□□□□ -0.35
CBX3-205ENST00000462165 TMEM63BQ5T3F8 832 aa12.89□□□□□ -0.35
CBX3-205ENST00000462165 FBXO16Q8IX29 292 aaPredicted RBP12.89□□□□□ -0.35
CBX3-205ENST00000462165 SCLYQ96I15 445 aa12.89□□□□□ -0.35
CBX3-205ENST00000462165 ALDH8A1Q9H2A2 487 aaPredicted RBP12.89□□□□□ -0.35
CBX3-205ENST00000462165 ISY1Q9ULR0 285 aaKnown RBP12.89□□□□□ -0.35
CBX3-205ENST00000462165 DDX49Q9Y6V7 483 aaKnown RBP12.89□□□□□ -0.35
CBX3-205ENST00000462165 PRRC2BQ5JSZ5 2229 aaKnown RBP12.89□□□□□ -0.35
CBX3-205ENST00000462165 ZBBXA8MT70 800 aa12.88□□□□□ -0.35
CBX3-205ENST00000462165 ERC2O15083 957 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms