RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 ATG4CQ96DT6 458 aa16.66■□□□□ 0.26
COL5A3-202ENST00000461214 UBA5Q9GZZ9 404 aa16.66■□□□□ 0.26
COL5A3-202ENST00000461214 RNF208Q9H0X6 261 aa16.66■□□□□ 0.26
COL5A3-202ENST00000461214 JMJD4Q9H9V9 463 aa16.66■□□□□ 0.26
COL5A3-202ENST00000461214 SLC38A10Q9HBR0 1119 aa16.66■□□□□ 0.26
COL5A3-202ENST00000461214 A0A0C4DFX4 3053 aa16.65■□□□□ 0.26
COL5A3-202ENST00000461214 PTPDC1A2A3K4 754 aa16.65■□□□□ 0.26
COL5A3-202ENST00000461214 ZBTB5O15062 677 aa16.65■□□□□ 0.26
COL5A3-202ENST00000461214 PRPF3O43395 683 aaKnown RBP16.65■□□□□ 0.26
COL5A3-202ENST00000461214 TLR2O60603 784 aa16.65■□□□□ 0.26
COL5A3-202ENST00000461214 FARP2O94887 1054 aaPredicted RBP16.65■□□□□ 0.26
COL5A3-202ENST00000461214 CTDNEP1O95476 244 aa16.65■□□□□ 0.26
COL5A3-202ENST00000461214 GJA8P48165 433 aa16.65■□□□□ 0.26
COL5A3-202ENST00000461214 AKAP17AQ02040 695 aaKnown RBP16.65■□□□□ 0.26
COL5A3-202ENST00000461214 SSRP1Q08945 709 aaKnown RBP16.65■□□□□ 0.26
COL5A3-202ENST00000461214 SLC35G1Q2M3R5 365 aa16.65■□□□□ 0.26
COL5A3-202ENST00000461214 FAM177A1Q8N128 213 aaPredicted RBP16.65■□□□□ 0.26
COL5A3-202ENST00000461214 CPVLQ9H3G5 476 aa16.65■□□□□ 0.26
COL5A3-202ENST00000461214 KIF3AQ9Y496 699 aa16.65■□□□□ 0.26
COL5A3-202ENST00000461214 RBM19Q9Y4C8 960 aaKnown RBP16.65■□□□□ 0.26
COL5A3-202ENST00000461214 RANBP2P49792 3224 aaKnown RBP16.65■□□□□ 0.26
COL5A3-202ENST00000461214 KIAA1217Q5T5P2 1943 aa16.64■□□□□ 0.26
COL5A3-202ENST00000461214 CUL9Q8IWT3 2517 aa16.64■□□□□ 0.25
COL5A3-202ENST00000461214 PNMA6FA0A0J9YX94 578 aa16.64■□□□□ 0.25
COL5A3-202ENST00000461214 ZBED4O75132 1171 aa16.64■□□□□ 0.25
COL5A3-202ENST00000461214 DEXIO95424 95 aa16.64■□□□□ 0.25
COL5A3-202ENST00000461214 ICAM1P05362 532 aa16.64■□□□□ 0.25
COL5A3-202ENST00000461214 GRK4P32298 578 aa16.64■□□□□ 0.25
COL5A3-202ENST00000461214 QRICH1Q2TAL8 776 aa16.64■□□□□ 0.25
COL5A3-202ENST00000461214 UBE2Q1Q7Z7E8 422 aa16.64■□□□□ 0.25
COL5A3-202ENST00000461214 CMTR1Q8N1G2 835 aaKnown RBP16.64■□□□□ 0.25
COL5A3-202ENST00000461214 REPS2Q8NFH8 660 aa16.64■□□□□ 0.25
COL5A3-202ENST00000461214 WASF1Q92558 559 aa16.64■□□□□ 0.25
COL5A3-202ENST00000461214 SLC26A6Q9BXS9 759 aa16.64■□□□□ 0.25
COL5A3-202ENST00000461214 RABGAP1Q9Y3P9 1069 aa16.64■□□□□ 0.25
COL5A3-202ENST00000461214 CTDP1Q9Y5B0 961 aaPredicted RBP16.64■□□□□ 0.25
COL5A3-202ENST00000461214 GNRH1P01148 92 aa16.63■□□□□ 0.25
COL5A3-202ENST00000461214 GJB1P08034 283 aa16.63■□□□□ 0.25
COL5A3-202ENST00000461214 CYP2C8P10632 490 aa16.63■□□□□ 0.25
COL5A3-202ENST00000461214 SCG2P13521 617 aa16.63■□□□□ 0.25
COL5A3-202ENST00000461214 COPB2P35606 906 aa16.63■□□□□ 0.25
COL5A3-202ENST00000461214 PSMC4P43686 418 aa16.63■□□□□ 0.25
COL5A3-202ENST00000461214 PRMT2P55345 433 aa16.63■□□□□ 0.25
COL5A3-202ENST00000461214 PFKFB3Q16875 520 aaPredicted RBP16.63■□□□□ 0.25
COL5A3-202ENST00000461214 PPP1R18Q6NYC8 613 aa16.63■□□□□ 0.25
COL5A3-202ENST00000461214 HOMER1Q86YM7 354 aa16.63■□□□□ 0.25
COL5A3-202ENST00000461214 CCDC82Q8N4S0 544 aa16.63■□□□□ 0.25
COL5A3-202ENST00000461214 PHKBQ93100 1093 aa16.63■□□□□ 0.25
COL5A3-202ENST00000461214 PIGSQ96S52 555 aa16.63■□□□□ 0.25
COL5A3-202ENST00000461214 P2RX7Q99572 595 aaKnown RBP16.63■□□□□ 0.25
COL5A3-202ENST00000461214 AMNQ9BXJ7 453 aa16.63■□□□□ 0.25
COL5A3-202ENST00000461214 TEX13BQ9BXU2 312 aa16.63■□□□□ 0.25
COL5A3-202ENST00000461214 MORF4L1Q9UBU8 362 aa16.63■□□□□ 0.25
COL5A3-202ENST00000461214 CPA4Q9UI42 421 aa16.63■□□□□ 0.25
COL5A3-202ENST00000461214 ZNF214Q9UL59 606 aaPredicted RBP16.63■□□□□ 0.25
COL5A3-202ENST00000461214 MCM3APO60318 1980 aa16.63■□□□□ 0.25
COL5A3-202ENST00000461214 HSP90AA1P07900 732 aaKnown RBP16.62■□□□□ 0.25
COL5A3-202ENST00000461214 FAM110CQ1W6H9 321 aa16.62■□□□□ 0.25
COL5A3-202ENST00000461214 SAMD1Q6SPF0 538 aaPredicted RBP16.62■□□□□ 0.25
COL5A3-202ENST00000461214 FBXO11Q86XK2 927 aa16.62■□□□□ 0.25
COL5A3-202ENST00000461214 ORC3Q9UBD5 711 aaPredicted RBP16.62■□□□□ 0.25
COL5A3-202ENST00000461214 SRRDQ9UH36 339 aa16.62■□□□□ 0.25
COL5A3-202ENST00000461214 ZNF536O15090 1300 aa16.62■□□□□ 0.25
COL5A3-202ENST00000461214 ABCB11O95342 1321 aa16.62■□□□□ 0.25
COL5A3-202ENST00000461214 CTGFP29279 349 aa16.61■□□□□ 0.25
COL5A3-202ENST00000461214 TKFCQ3LXA3 575 aa16.61■□□□□ 0.25
COL5A3-202ENST00000461214 TEX2Q8IWB9 1127 aa16.61■□□□□ 0.25
COL5A3-202ENST00000461214 RGS22Q8NE09 1264 aa16.61■□□□□ 0.25
COL5A3-202ENST00000461214 CCDC148Q8NFR7 591 aa16.61■□□□□ 0.25
COL5A3-202ENST00000461214 U2AF1L4Q8WU68 220 aaKnown RBP16.61■□□□□ 0.25
COL5A3-202ENST00000461214 CCDC12Q8WUD4 166 aaPredicted RBP16.61■□□□□ 0.25
COL5A3-202ENST00000461214 TRIM47Q96LD4 638 aa16.61■□□□□ 0.25
COL5A3-202ENST00000461214 MAF1Q9H063 256 aa16.61■□□□□ 0.25
COL5A3-202ENST00000461214 VAT1LQ9HCJ6 419 aa16.61■□□□□ 0.25
COL5A3-202ENST00000461214 SH3GLB2Q9NR46 395 aa16.61■□□□□ 0.25
COL5A3-202ENST00000461214 CCPG1Q9ULG6 757 aa16.61■□□□□ 0.25
COL5A3-202ENST00000461214 SMC3Q9UQE7 1217 aa16.61■□□□□ 0.25
COL5A3-202ENST00000461214 STXBP5LQ9Y2K9 1186 aa16.61■□□□□ 0.25
COL5A3-202ENST00000461214 V9GY48 417 aaPredicted RBP16.61■□□□□ 0.25
COL5A3-202ENST00000461214 JAK2O60674 1132 aa16.6■□□□□ 0.25
COL5A3-202ENST00000461214 CNMDO75829 334 aa16.6■□□□□ 0.25
COL5A3-202ENST00000461214 XBP1P17861 261 aa16.6■□□□□ 0.25
COL5A3-202ENST00000461214 HOXD10P28358 340 aa16.6■□□□□ 0.25
COL5A3-202ENST00000461214 ERVK-9P63128 1117 aa16.6■□□□□ 0.25
COL5A3-202ENST00000461214 ERVK-24P63145 666 aa16.6■□□□□ 0.25
COL5A3-202ENST00000461214 UBXN2AP68543 259 aa16.6■□□□□ 0.25
COL5A3-202ENST00000461214 CCNA1P78396 465 aa16.6■□□□□ 0.25
COL5A3-202ENST00000461214 TMEM132BQ14DG7 1078 aa16.6■□□□□ 0.25
COL5A3-202ENST00000461214 PKN1Q16512 942 aa16.6■□□□□ 0.25
COL5A3-202ENST00000461214 CCDC174Q6PII3 467 aa16.6■□□□□ 0.25
COL5A3-202ENST00000461214 SHCBP1Q8NEM2 672 aa16.6■□□□□ 0.25
COL5A3-202ENST00000461214 PAGR1Q9BTK6 254 aa16.6■□□□□ 0.25
COL5A3-202ENST00000461214 SPATC1LQ9H0A9 340 aa16.6■□□□□ 0.25
COL5A3-202ENST00000461214 UNC93B1Q9H1C4 597 aa16.6■□□□□ 0.25
COL5A3-202ENST00000461214 BARHL2Q9NY43 387 aa16.6■□□□□ 0.25
COL5A3-202ENST00000461214 BTBD7Q9P203 1132 aa16.6■□□□□ 0.25
COL5A3-202ENST00000461214 ESYT2A0FGR8 921 aa16.59■□□□□ 0.25
COL5A3-202ENST00000461214 PPP1R11O60927 126 aaPredicted RBP16.59■□□□□ 0.25
COL5A3-202ENST00000461214 SLC25A27O95847 323 aa16.59■□□□□ 0.25
COL5A3-202ENST00000461214 BCRP11274 1271 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms