RNA–Protein interactions for RNA: ENST00000460584.1

LSG1-204, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 668 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-204ENST00000460584 TNFAIP2Q03169 654 aa13.5□□□□□ -0.25
LSG1-204ENST00000460584 TMEM240Q5SV17 173 aa13.5□□□□□ -0.25
LSG1-204ENST00000460584 TAPT1Q6NXT6 567 aa13.5□□□□□ -0.25
LSG1-204ENST00000460584 MAFAQ8NHW3 353 aaPredicted RBP13.5□□□□□ -0.25
LSG1-204ENST00000460584 FAM161BQ96MY7 647 aa13.5□□□□□ -0.25
LSG1-204ENST00000460584 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.5□□□□□ -0.251e-7■□□□□ 8.4
LSG1-204ENST00000460584 MAF1Q9H063 256 aa13.5□□□□□ -0.25
LSG1-204ENST00000460584 PNMA2Q9UL42 364 aa13.5□□□□□ -0.25
LSG1-204ENST00000460584 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.49□□□□□ -0.25
LSG1-204ENST00000460584 PCP11498 1178 aaKnown RBP13.49□□□□□ -0.25
LSG1-204ENST00000460584 AAMPQ13685 434 aa13.49□□□□□ -0.25
LSG1-204ENST00000460584 VPS53Q5VIR6 699 aa13.49□□□□□ -0.25
LSG1-204ENST00000460584 TMEM199Q8N511 208 aa13.49□□□□□ -0.25
LSG1-204ENST00000460584 VTA1Q9NP79 307 aa13.49□□□□□ -0.25
LSG1-204ENST00000460584 STX8Q9UNK0 236 aa13.49□□□□□ -0.25
LSG1-204ENST00000460584 UNC80Q8N2C7 3258 aa13.49□□□□□ -0.25
LSG1-204ENST00000460584 GRIN2DO15399 1336 aa13.48□□□□□ -0.25
LSG1-204ENST00000460584 RBM47A0AV96 593 aaKnown RBP13.48□□□□□ -0.25
LSG1-204ENST00000460584 TLR3O15455 904 aaKnown RBP13.48□□□□□ -0.25
LSG1-204ENST00000460584 NMT2O60551 498 aa13.48□□□□□ -0.25
LSG1-204ENST00000460584 FGAP02671 866 aa13.48□□□□□ -0.25
LSG1-204ENST00000460584 SNHG28P0DPA3 235 aa13.48□□□□□ -0.25
LSG1-204ENST00000460584 TOP1P11387 765 aaKnown RBP13.48□□□□□ -0.25
LSG1-204ENST00000460584 SMPD1P17405 629 aa13.48□□□□□ -0.25
LSG1-204ENST00000460584 DNAJB2P25686 324 aa13.48□□□□□ -0.25
LSG1-204ENST00000460584 RRP1P56182 461 aaKnown RBP13.48□□□□□ -0.25
LSG1-204ENST00000460584 CTDSPL2Q05D32 466 aa13.48□□□□□ -0.25
LSG1-204ENST00000460584 FSCN1Q16658 493 aaKnown RBP13.48□□□□□ -0.25
LSG1-204ENST00000460584 MCMDC2Q4G0Z9 681 aa13.48□□□□□ -0.25
LSG1-204ENST00000460584 MUM1L1Q5H9M0 696 aa13.48□□□□□ -0.25
LSG1-204ENST00000460584 PSRC1Q6PGN9 363 aaPredicted RBP13.48□□□□□ -0.25
LSG1-204ENST00000460584 KCTD1Q719H9 257 aa13.48□□□□□ -0.25
LSG1-204ENST00000460584 TTC14Q96N46 770 aa13.48□□□□□ -0.25
LSG1-204ENST00000460584 INCENPQ9NQS7 918 aa13.48□□□□□ -0.25
LSG1-204ENST00000460584 HOMER2Q9NSB8 354 aa13.48□□□□□ -0.25
LSG1-204ENST00000460584 MCM3APO60318 1980 aa13.48□□□□□ -0.25
LSG1-204ENST00000460584 ZEB2O60315 1214 aa13.47□□□□□ -0.25
LSG1-204ENST00000460584 ALAS1P13196 640 aa13.47□□□□□ -0.25
LSG1-204ENST00000460584 SLC4A3P48751 1232 aa13.47□□□□□ -0.25
LSG1-204ENST00000460584 DUSP28Q4G0W2 176 aa13.47□□□□□ -0.25
LSG1-204ENST00000460584 TLK2Q86UE8 772 aa13.47□□□□□ -0.25
LSG1-204ENST00000460584 MYLIPQ8WY64 445 aa13.47□□□□□ -0.25
LSG1-204ENST00000460584 HERVK_113Q902F9 699 aa13.47□□□□□ -0.25
LSG1-204ENST00000460584 IL23AQ9NPF7 189 aa13.47□□□□□ -0.25
LSG1-204ENST00000460584 LRRC37A2A6NM11 1700 aa13.47□□□□□ -0.25
LSG1-204ENST00000460584 TTC28Q96AY4 2481 aa13.47□□□□□ -0.25
LSG1-204ENST00000460584 WDR19Q8NEZ3 1342 aa13.46□□□□□ -0.25
LSG1-204ENST00000460584 RANBP6O60518 1105 aaKnown RBP13.46□□□□□ -0.25
LSG1-204ENST00000460584 HSPD1P10809 573 aaKnown RBP13.46□□□□□ -0.25
LSG1-204ENST00000460584 CSF2RAP15509 400 aa13.46□□□□□ -0.25
LSG1-204ENST00000460584 EDNRBP24530 442 aa13.46□□□□□ -0.25
LSG1-204ENST00000460584 BEX3Q00994 111 aa13.46□□□□□ -0.25
LSG1-204ENST00000460584 IKQ13123 557 aaPredicted RBP13.46□□□□□ -0.25
LSG1-204ENST00000460584 ITGA7Q13683 1181 aa13.46□□□□□ -0.25
LSG1-204ENST00000460584 GRIN2CQ14957 1233 aa13.46□□□□□ -0.25
LSG1-204ENST00000460584 ANKRD45Q5TZF3 282 aa13.46□□□□□ -0.25
LSG1-204ENST00000460584 SYDE2Q5VT97 1194 aa13.46□□□□□ -0.25
LSG1-204ENST00000460584 CXCL17Q6UXB2 119 aa13.46□□□□□ -0.25
LSG1-204ENST00000460584 RGS22Q8NE09 1264 aa13.46□□□□□ -0.25
LSG1-204ENST00000460584 TIFAQ96CG3 184 aa13.46□□□□□ -0.25
LSG1-204ENST00000460584 TMEM47Q9BQJ4 181 aa13.46□□□□□ -0.25
LSG1-204ENST00000460584 AP5M1Q9H0R1 490 aa13.46□□□□□ -0.25
LSG1-204ENST00000460584 ZNF576Q9H609 170 aa13.46□□□□□ -0.25
LSG1-204ENST00000460584 ADD3Q9UEY8 706 aaKnown RBP13.46□□□□□ -0.25
LSG1-204ENST00000460584 CCPG1Q9ULG6 757 aa13.46□□□□□ -0.25
LSG1-204ENST00000460584 A0A0D9SFI3 127 aa13.45□□□□□ -0.26
LSG1-204ENST00000460584 PDHBP11177 359 aa13.45□□□□□ -0.26
LSG1-204ENST00000460584 FOSL2P15408 326 aa13.45□□□□□ -0.26
LSG1-204ENST00000460584 TTBK2Q6IQ55 1244 aa13.45□□□□□ -0.26
LSG1-204ENST00000460584 ZNF365Q70YC5 407 aa13.45□□□□□ -0.26
LSG1-204ENST00000460584 RASGRP2Q7LDG7 609 aa13.45□□□□□ -0.26
LSG1-204ENST00000460584 SMC5Q8IY18 1101 aa13.45□□□□□ -0.26
LSG1-204ENST00000460584 CLEC4DQ8WXI8 215 aa13.45□□□□□ -0.26
LSG1-204ENST00000460584 VWCEQ96DN2 955 aa13.45□□□□□ -0.26
LSG1-204ENST00000460584 FAM227BQ96M60 508 aa13.45□□□□□ -0.26
LSG1-204ENST00000460584 NOC4LQ9BVI4 516 aaKnown RBP13.45□□□□□ -0.26
LSG1-204ENST00000460584 OSBPL3Q9H4L5 887 aa13.45□□□□□ -0.26
LSG1-204ENST00000460584 PDGFCQ9NRA1 345 aa13.45□□□□□ -0.26
LSG1-204ENST00000460584 LCTP09848 1927 aa13.45□□□□□ -0.26
LSG1-204ENST00000460584 NKRFO15226 690 aaKnown RBP eCLIP13.44□□□□□ -0.26
LSG1-204ENST00000460584 DYNC1LI2O43237 492 aaPredicted RBP13.44□□□□□ -0.26
LSG1-204ENST00000460584 ALDH5A1P51649 535 aaPredicted RBP13.44□□□□□ -0.26
LSG1-204ENST00000460584 ZNF543Q08ER8 600 aa13.44□□□□□ -0.26
LSG1-204ENST00000460584 BAATQ14032 418 aaPredicted RBP13.44□□□□□ -0.26
LSG1-204ENST00000460584 AKNAD1Q5T1N1 836 aa13.44□□□□□ -0.26
LSG1-204ENST00000460584 FBXO16Q8IX29 292 aaPredicted RBP13.44□□□□□ -0.26
LSG1-204ENST00000460584 DNERQ8NFT8 737 aa13.44□□□□□ -0.26
LSG1-204ENST00000460584 ANKS1AQ92625 1134 aa13.44□□□□□ -0.26
LSG1-204ENST00000460584 VTI1AQ96AJ9 217 aa13.44□□□□□ -0.26
LSG1-204ENST00000460584 PBX4Q9BYU1 374 aa13.44□□□□□ -0.26
LSG1-204ENST00000460584 HIPK3Q9H422 1215 aa13.44□□□□□ -0.26
LSG1-204ENST00000460584 ZBTB47Q9UFB7 747 aaPredicted RBP13.44□□□□□ -0.26
LSG1-204ENST00000460584 VCANP13611 3396 aa13.44□□□□□ -0.26
LSG1-204ENST00000460584 CCDC171Q6TFL3 1326 aa13.43□□□□□ -0.26
LSG1-204ENST00000460584 NFIBO00712 420 aa13.43□□□□□ -0.26
LSG1-204ENST00000460584 CYP2C18P33260 490 aa13.43□□□□□ -0.26
LSG1-204ENST00000460584 SNAP25P60880 206 aa13.43□□□□□ -0.26
LSG1-204ENST00000460584 RAB30Q15771 203 aa13.43□□□□□ -0.26
LSG1-204ENST00000460584 CCDC96Q2M329 555 aa13.43□□□□□ -0.26
LSG1-204ENST00000460584 TMEM63BQ5T3F8 832 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms