RNA–Protein interactions for RNA: ENST00000459708.1

SSX2IP-204, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-204ENST00000459708 NFIBO00712 420 aa5.81□□□□□ -1.48
SSX2IP-204ENST00000459708 VAMP4O75379 141 aa5.81□□□□□ -1.48
SSX2IP-204ENST00000459708 KCNH1O95259 989 aa5.81□□□□□ -1.48
SSX2IP-204ENST00000459708 KRT1P04264 644 aa5.81□□□□□ -1.48
SSX2IP-204ENST00000459708 NAT2P11245 290 aa5.81□□□□□ -1.48
SSX2IP-204ENST00000459708 ZNF143P52747 638 aaPredicted RBP5.81□□□□□ -1.48
SSX2IP-204ENST00000459708 SLC10A6Q3KNW5 377 aa5.81□□□□□ -1.48
SSX2IP-204ENST00000459708 HSF5Q4G112 596 aaPredicted RBP5.81□□□□□ -1.48
SSX2IP-204ENST00000459708 NLRX1Q86UT6 975 aa5.81□□□□□ -1.48
SSX2IP-204ENST00000459708 ZNF227Q86WZ6 799 aa5.81□□□□□ -1.48
SSX2IP-204ENST00000459708 TNFRSF10DQ9UBN6 386 aa5.81□□□□□ -1.48
SSX2IP-204ENST00000459708 AKT3Q9Y243 479 aa5.81□□□□□ -1.48
SSX2IP-204ENST00000459708 EMC9Q9Y3B6 208 aa5.81□□□□□ -1.48
SSX2IP-204ENST00000459708 AURKAO14965 403 aa5.8□□□□□ -1.48
SSX2IP-204ENST00000459708 NRDCO43847 1150 aa5.8□□□□□ -1.48
SSX2IP-204ENST00000459708 ATP2B1P20020 1258 aa5.8□□□□□ -1.48
SSX2IP-204ENST00000459708 GTF2F1P35269 517 aaKnown RBP eCLIP5.8□□□□□ -1.48
SSX2IP-204ENST00000459708 RTP1P59025 263 aa5.8□□□□□ -1.48
SSX2IP-204ENST00000459708 AMPD2Q01433 879 aa5.8□□□□□ -1.48
SSX2IP-204ENST00000459708 RAB33AQ14088 237 aa5.8□□□□□ -1.48
SSX2IP-204ENST00000459708 SLC14A2Q15849 920 aa5.8□□□□□ -1.48
SSX2IP-204ENST00000459708 RCSD1Q6JBY9 416 aa5.8□□□□□ -1.48
SSX2IP-204ENST00000459708 SPPL2CQ8IUH8 684 aa5.8□□□□□ -1.48
SSX2IP-204ENST00000459708 TRIM59Q8IWR1 403 aa5.8□□□□□ -1.48
SSX2IP-204ENST00000459708 FBXO15Q8NCQ5 510 aaPredicted RBP5.8□□□□□ -1.48
SSX2IP-204ENST00000459708 BVESQ8NE79 360 aa5.8□□□□□ -1.48
SSX2IP-204ENST00000459708 JMJD8Q96S16 334 aa5.8□□□□□ -1.48
SSX2IP-204ENST00000459708 DIRC2Q96SL1 478 aa5.8□□□□□ -1.48
SSX2IP-204ENST00000459708 APBA2Q99767 749 aa5.8□□□□□ -1.48
SSX2IP-204ENST00000459708 RAPGEFL1Q9UHV5 662 aa5.8□□□□□ -1.48
SSX2IP-204ENST00000459708 YBX2Q9Y2T7 364 aaKnown RBP5.8□□□□□ -1.48
SSX2IP-204ENST00000459708 BACE2Q9Y5Z0 518 aa5.8□□□□□ -1.48
SSX2IP-204ENST00000459708 TAF6LQ9Y6J9 622 aa5.8□□□□□ -1.48
SSX2IP-204ENST00000459708 NPIPB6E9PJ23 425 aa5.79□□□□□ -1.48
SSX2IP-204ENST00000459708 ITGAVP06756 1048 aa5.79□□□□□ -1.48
SSX2IP-204ENST00000459708 INHBBP09529 407 aa5.79□□□□□ -1.48
SSX2IP-204ENST00000459708 SV2CQ496J9 727 aa5.79□□□□□ -1.48
SSX2IP-204ENST00000459708 GTF2IRD2BQ6EKJ0 949 aa5.79□□□□□ -1.48
SSX2IP-204ENST00000459708 CYP2R1Q6VVX0 501 aa5.79□□□□□ -1.48
SSX2IP-204ENST00000459708 EEPD1Q7L9B9 569 aa5.79□□□□□ -1.48
SSX2IP-204ENST00000459708 GTF2IRD2Q86UP8 949 aa5.79□□□□□ -1.48
SSX2IP-204ENST00000459708 SIRT2Q8IXJ6 389 aa5.79□□□□□ -1.48
SSX2IP-204ENST00000459708 CKAP2LQ8IYA6 745 aa5.79□□□□□ -1.48
SSX2IP-204ENST00000459708 BTN2A2Q8WVV5 523 aa5.79□□□□□ -1.48
SSX2IP-204ENST00000459708 INTS4Q96HW7 963 aaKnown RBP5.79□□□□□ -1.48
SSX2IP-204ENST00000459708 MRGPRX3Q96LB0 322 aa5.79□□□□□ -1.48
SSX2IP-204ENST00000459708 PTCHD1Q96NR3 888 aa5.79□□□□□ -1.48
SSX2IP-204ENST00000459708 TRIM55Q9BYV6 548 aa5.79□□□□□ -1.48
SSX2IP-204ENST00000459708 NSUN3Q9H649 340 aaKnown RBP5.79□□□□□ -1.48
SSX2IP-204ENST00000459708 KCNK12Q9HB15 430 aa5.79□□□□□ -1.48
SSX2IP-204ENST00000459708 IMPACTQ9P2X3 320 aa5.79□□□□□ -1.48
SSX2IP-204ENST00000459708 SDHBP21912 280 aa5.78□□□□□ -1.48
SSX2IP-204ENST00000459708 NOP2P46087 812 aaKnown RBP5.78□□□□□ -1.48
SSX2IP-204ENST00000459708 SCRN1Q12765 414 aa5.78□□□□□ -1.48
SSX2IP-204ENST00000459708 EEF1DP3Q658K8 133 aa5.78□□□□□ -1.48
SSX2IP-204ENST00000459708 POMZP3Q6PJE2 187 aa5.78□□□□□ -1.48
SSX2IP-204ENST00000459708 CRACR2BQ8N4Y2 399 aaPredicted RBP5.78□□□□□ -1.48
SSX2IP-204ENST00000459708 CWC22Q9HCG8 908 aaKnown RBP5.78□□□□□ -1.48
SSX2IP-204ENST00000459708 A0A1W2PQ45 241 aaPredicted RBP5.77□□□□□ -1.49
SSX2IP-204ENST00000459708 A0A1W2PQY0 241 aa5.77□□□□□ -1.49
SSX2IP-204ENST00000459708 C2orf71A6NGG8 1288 aa5.77□□□□□ -1.49
SSX2IP-204ENST00000459708 NOP56O00567 594 aaKnown RBP5.77□□□□□ -1.49
SSX2IP-204ENST00000459708 MSL3P1P0C860 447 aa5.77□□□□□ -1.49
SSX2IP-204ENST00000459708 SEPHS1P49903 392 aa5.77□□□□□ -1.49
SSX2IP-204ENST00000459708 CYP4F3Q08477 520 aa5.77□□□□□ -1.49
SSX2IP-204ENST00000459708 SNX17Q15036 470 aa5.77□□□□□ -1.49
SSX2IP-204ENST00000459708 GALNT18Q6P9A2 607 aa5.77□□□□□ -1.49
SSX2IP-204ENST00000459708 NUP43Q8NFH3 380 aa5.77□□□□□ -1.49
SSX2IP-204ENST00000459708 SLC6A17Q9H1V8 727 aa5.77□□□□□ -1.49
SSX2IP-204ENST00000459708 NKX2-4Q9H2Z4 354 aa5.77□□□□□ -1.49
SSX2IP-204ENST00000459708 LRP2BPQ9P2M1 347 aa5.77□□□□□ -1.49
SSX2IP-204ENST00000459708 WTIPA6NIX2 430 aaPredicted RBP5.76□□□□□ -1.49
SSX2IP-204ENST00000459708 THBDP07204 575 aa5.76□□□□□ -1.49
SSX2IP-204ENST00000459708 PRKCAP17252 672 aa5.76□□□□□ -1.49
SSX2IP-204ENST00000459708 LAPTM5Q13571 262 aa5.76□□□□□ -1.49
SSX2IP-204ENST00000459708 SF3A1Q15459 793 aaKnown RBP5.76□□□□□ -1.49
SSX2IP-204ENST00000459708 ADGRF1Q5T601 910 aa5.76□□□□□ -1.49
SSX2IP-204ENST00000459708 MBLAC2Q68D91 279 aa5.76□□□□□ -1.49
SSX2IP-204ENST00000459708 JAMLQ86YT9 394 aa5.76□□□□□ -1.49
SSX2IP-204ENST00000459708 IRF2BP1Q8IU81 584 aa5.76□□□□□ -1.49
SSX2IP-204ENST00000459708 SREK1Q8WXA9 508 aaKnown RBP5.76□□□□□ -1.49
SSX2IP-204ENST00000459708 COPS5Q92905 334 aa5.76□□□□□ -1.49
SSX2IP-204ENST00000459708 EPB41L4BQ9H329 900 aa5.76□□□□□ -1.49
SSX2IP-204ENST00000459708 CCDC180Q9P1Z9 1646 aa5.76□□□□□ -1.49
SSX2IP-204ENST00000459708 CCDC85CA6NKD9 419 aa5.75□□□□□ -1.49
SSX2IP-204ENST00000459708 TMEM253P0C7T8 217 aa5.75□□□□□ -1.49
SSX2IP-204ENST00000459708 PLS3P13797 630 aa5.75□□□□□ -1.49
SSX2IP-204ENST00000459708 PDE6BP35913 854 aa5.75□□□□□ -1.49
SSX2IP-204ENST00000459708 GRIA2P42262 883 aa5.75□□□□□ -1.49
SSX2IP-204ENST00000459708 CTSWP56202 376 aa5.75□□□□□ -1.49
SSX2IP-204ENST00000459708 MVKQ03426 396 aa5.75□□□□□ -1.49
SSX2IP-204ENST00000459708 SERINC3Q13530 473 aa5.75□□□□□ -1.49
SSX2IP-204ENST00000459708 SF1Q15637 639 aaKnown RBP5.75□□□□□ -1.49
SSX2IP-204ENST00000459708 KCNA10Q16322 511 aa5.75□□□□□ -1.49
SSX2IP-204ENST00000459708 HLA-DQA1Q5Y7H0 255 aa5.75□□□□□ -1.49
SSX2IP-204ENST00000459708 ARMC5Q96C12 935 aa5.75□□□□□ -1.49
SSX2IP-204ENST00000459708 EPN3Q9H201 632 aa5.75□□□□□ -1.49
SSX2IP-204ENST00000459708 TNFRSF12AQ9NP84 129 aa5.75□□□□□ -1.49
SSX2IP-204ENST00000459708 CD320Q9NPF0 282 aa5.75□□□□□ -1.49
SSX2IP-204ENST00000459708 DCP1AQ9NPI6 582 aaPredicted RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms