RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 PP2D1A8MPX8 630 aa11.47□□□□□ -0.57
CLIP4-208ENST00000456385 TACC1O75410 805 aa11.47□□□□□ -0.57
CLIP4-208ENST00000456385 RASSF9O75901 435 aa11.47□□□□□ -0.57
CLIP4-208ENST00000456385 BMP15O95972 392 aa11.47□□□□□ -0.57
CLIP4-208ENST00000456385 PCCAP05165 728 aaPredicted RBP11.47□□□□□ -0.57
CLIP4-208ENST00000456385 NR1D1P20393 614 aa11.47□□□□□ -0.57
CLIP4-208ENST00000456385 RDXP35241 583 aaKnown RBP11.47□□□□□ -0.57
CLIP4-208ENST00000456385 ITIH3Q06033 890 aa11.47□□□□□ -0.57
CLIP4-208ENST00000456385 SPRED3Q2MJR0 410 aa11.47□□□□□ -0.57
CLIP4-208ENST00000456385 CFAP58Q5T655 872 aa11.47□□□□□ -0.57
CLIP4-208ENST00000456385 NLRP14Q86W24 1093 aa11.47□□□□□ -0.57
CLIP4-208ENST00000456385 VGLL2Q8N8G2 317 aa11.47□□□□□ -0.57
CLIP4-208ENST00000456385 MYCBPAPQ8TBZ2 947 aa11.47□□□□□ -0.57
CLIP4-208ENST00000456385 MCM8Q9UJA3 840 aa11.47□□□□□ -0.57
CLIP4-208ENST00000456385 PCDHA13Q9Y5I0 950 aa11.47□□□□□ -0.57
CLIP4-208ENST00000456385 GLI3P10071 1580 aa11.47□□□□□ -0.57
CLIP4-208ENST00000456385 MINDY4BA8MYZ0 360 aa11.47□□□□□ -0.57
CLIP4-208ENST00000456385 E7EVH7 732 aa11.47□□□□□ -0.57
CLIP4-208ENST00000456385 KIF1CO43896 1103 aaKnown RBP11.47□□□□□ -0.57
CLIP4-208ENST00000456385 ECM2O94769 699 aaPredicted RBP11.47□□□□□ -0.57
CLIP4-208ENST00000456385 STAT6P42226 847 aa11.47□□□□□ -0.57
CLIP4-208ENST00000456385 DNA2P51530 1060 aa11.47□□□□□ -0.57
CLIP4-208ENST00000456385 SMTNP53814 917 aa11.47□□□□□ -0.57
CLIP4-208ENST00000456385 TTI2Q6NXR4 508 aa11.47□□□□□ -0.57
CLIP4-208ENST00000456385 YTHDF3Q7Z739 585 aaKnown RBP11.47□□□□□ -0.57
CLIP4-208ENST00000456385 C2CD5Q86YS7 1000 aa11.47□□□□□ -0.57
CLIP4-208ENST00000456385 TMTC2Q8N394 836 aa11.47□□□□□ -0.57
CLIP4-208ENST00000456385 CSGALNACT2Q8N6G5 542 aa11.47□□□□□ -0.57
CLIP4-208ENST00000456385 DUSP9Q99956 384 aaKnown RBP11.47□□□□□ -0.57
CLIP4-208ENST00000456385 THAP9Q9H5L6 903 aa11.47□□□□□ -0.57
CLIP4-208ENST00000456385 EPB41L5Q9HCM4 733 aa11.47□□□□□ -0.57
CLIP4-208ENST00000456385 SLC40A1Q9NP59 571 aa11.47□□□□□ -0.57
CLIP4-208ENST00000456385 ARHGAP20Q9P2F6 1191 aa11.47□□□□□ -0.57
CLIP4-208ENST00000456385 PARP4Q9UKK3 1724 aaKnown RBP11.46□□□□□ -0.57
CLIP4-208ENST00000456385 KIF1AQ12756 1690 aa11.46□□□□□ -0.57
CLIP4-208ENST00000456385 A6NNZ2 444 aa11.46□□□□□ -0.57
CLIP4-208ENST00000456385 EPHB6O15197 1021 aa11.46□□□□□ -0.57
CLIP4-208ENST00000456385 SSBP05455 408 aaKnown RBP eCLIP11.46□□□□□ -0.57
CLIP4-208ENST00000456385 PDHBP11177 359 aa11.46□□□□□ -0.57
CLIP4-208ENST00000456385 ELF1P32519 619 aa11.46□□□□□ -0.57
CLIP4-208ENST00000456385 HPDP32754 393 aaPredicted RBP11.46□□□□□ -0.57
CLIP4-208ENST00000456385 GUCY2DQ02846 1103 aa11.46□□□□□ -0.57
CLIP4-208ENST00000456385 NEDD9Q14511 834 aa11.46□□□□□ -0.57
CLIP4-208ENST00000456385 SEC23AQ15436 765 aa11.46□□□□□ -0.57
CLIP4-208ENST00000456385 KCTD19Q17RG1 926 aaPredicted RBP11.46□□□□□ -0.57
CLIP4-208ENST00000456385 TUBB8Q3ZCM7 444 aa11.46□□□□□ -0.57
CLIP4-208ENST00000456385 NAALADL2Q58DX5 795 aa11.46□□□□□ -0.57
CLIP4-208ENST00000456385 MICALCLQ6ZW33 695 aa11.46□□□□□ -0.57
CLIP4-208ENST00000456385 SPATS2Q86XZ4 545 aaKnown RBP11.46□□□□□ -0.57
CLIP4-208ENST00000456385 N4BP2L2Q92802 583 aaPredicted RBP11.46□□□□□ -0.57
CLIP4-208ENST00000456385 ZNF512BQ96KM6 892 aaPredicted RBP11.46□□□□□ -0.57
CLIP4-208ENST00000456385 TSGA10Q9BZW7 698 aa11.46□□□□□ -0.57
CLIP4-208ENST00000456385 PPANQ9NQ55 473 aaKnown RBP11.46□□□□□ -0.57
CLIP4-208ENST00000456385 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.46□□□□□ -0.57
CLIP4-208ENST00000456385 HYOU1Q9Y4L1 999 aa11.46□□□□□ -0.57
CLIP4-208ENST00000456385 NUP188Q5SRE5 1749 aa11.46□□□□□ -0.58
CLIP4-208ENST00000456385 SOS2Q07890 1332 aaPredicted RBP11.46□□□□□ -0.58
CLIP4-208ENST00000456385 CLGNO14967 610 aa11.46□□□□□ -0.58
CLIP4-208ENST00000456385 PRPF3O43395 683 aaKnown RBP11.46□□□□□ -0.58
CLIP4-208ENST00000456385 BUB1O43683 1085 aa11.46□□□□□ -0.58
CLIP4-208ENST00000456385 C21orf2O43822 256 aa11.46□□□□□ -0.58
CLIP4-208ENST00000456385 USO1O60763 962 aaKnown RBP11.46□□□□□ -0.58
CLIP4-208ENST00000456385 PDE8BO95263 885 aa11.46□□□□□ -0.58
CLIP4-208ENST00000456385 PRLRP16471 622 aa11.46□□□□□ -0.58
CLIP4-208ENST00000456385 ARID4AP29374 1257 aaPredicted RBP11.46□□□□□ -0.58
CLIP4-208ENST00000456385 MDH1P40925 334 aaKnown RBP11.46□□□□□ -0.58
CLIP4-208ENST00000456385 RASGRF1Q13972 1273 aa11.46□□□□□ -0.58
CLIP4-208ENST00000456385 PREPLQ4J6C6 727 aaPredicted RBP11.46□□□□□ -0.58
CLIP4-208ENST00000456385 MIIPQ5JXC2 388 aa11.46□□□□□ -0.58
CLIP4-208ENST00000456385 CEP57Q86XR8 500 aa11.46□□□□□ -0.58
CLIP4-208ENST00000456385 ENAHQ8N8S7 591 aaPredicted RBP11.46□□□□□ -0.58
CLIP4-208ENST00000456385 SPATA5Q8NB90 893 aa11.46□□□□□ -0.58
CLIP4-208ENST00000456385 PAGR1Q9BTK6 254 aa11.46□□□□□ -0.58
CLIP4-208ENST00000456385 TLR10Q9BXR5 811 aa11.46□□□□□ -0.58
CLIP4-208ENST00000456385 KLRC4O43908 158 aa11.45□□□□□ -0.58
CLIP4-208ENST00000456385 HEXIM1O94992 359 aaKnown RBP11.45□□□□□ -0.58
CLIP4-208ENST00000456385 TCP1P17987 556 aaKnown RBP11.45□□□□□ -0.58
CLIP4-208ENST00000456385 KIF11P52732 1056 aa11.45□□□□□ -0.58
CLIP4-208ENST00000456385 MAP3K12Q12852 859 aa11.45□□□□□ -0.58
CLIP4-208ENST00000456385 CHRNA2Q15822 529 aa11.45□□□□□ -0.58
CLIP4-208ENST00000456385 CEP85LQ5SZL2 805 aa11.45□□□□□ -0.58
CLIP4-208ENST00000456385 RPAINQ86UA6 219 aa11.45□□□□□ -0.58
CLIP4-208ENST00000456385 SDR42E1Q8WUS8 393 aa11.45□□□□□ -0.58
CLIP4-208ENST00000456385 RUBCNQ92622 972 aa11.45□□□□□ -0.58
CLIP4-208ENST00000456385 CNOT6LQ96LI5 555 aaKnown RBP11.45□□□□□ -0.58
CLIP4-208ENST00000456385 DISP2A7MBM2 1401 aa11.45□□□□□ -0.58
CLIP4-208ENST00000456385 MYH10P35580 1976 aa11.45□□□□□ -0.58
CLIP4-208ENST00000456385 PSMA7O14818 248 aa11.44□□□□□ -0.58
CLIP4-208ENST00000456385 BACH1O14867 736 aa11.44□□□□□ -0.58
CLIP4-208ENST00000456385 FAM107AO95990 144 aa11.44□□□□□ -0.58
CLIP4-208ENST00000456385 TNFRSF8P28908 595 aa11.44□□□□□ -0.58
CLIP4-208ENST00000456385 EIF4A3P38919 411 aaKnown RBP11.44□□□□□ -0.58
CLIP4-208ENST00000456385 PAFAH1B1P43034 410 aa11.44□□□□□ -0.58
CLIP4-208ENST00000456385 RNASE9P60153 205 aaKnown RBP11.44□□□□□ -0.58
CLIP4-208ENST00000456385 ITGB3BPQ13352 177 aaPredicted RBP11.44□□□□□ -0.58
CLIP4-208ENST00000456385 ANKRD40Q6AI12 368 aa11.44□□□□□ -0.58
CLIP4-208ENST00000456385 C6orf89Q6UWU4 347 aa11.44□□□□□ -0.58
CLIP4-208ENST00000456385 KRT28Q7Z3Y7 464 aa11.44□□□□□ -0.58
CLIP4-208ENST00000456385 FAM228AQ86W67 206 aa11.44□□□□□ -0.58
CLIP4-208ENST00000456385 ZBTB38Q8NAP3 1195 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms