RNA–Protein interactions for RNA: ENST00000456096.6

TVP23A-202, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-202ENST00000456096 ASB14A6NK59 587 aa19.83■□□□□ 0.77
TVP23A-202ENST00000456096 CSF2RAP15509 400 aa19.83■□□□□ 0.77
TVP23A-202ENST00000456096 PPIGQ13427 754 aaKnown RBP eCLIP19.83■□□□□ 0.77
TVP23A-202ENST00000456096 PPP4R3BQ5MIZ7 849 aa19.83■□□□□ 0.77
TVP23A-202ENST00000456096 TMEM240Q5SV17 173 aa19.83■□□□□ 0.77
TVP23A-202ENST00000456096 PRR12Q9ULL5 1215 aa19.83■□□□□ 0.77
TVP23A-202ENST00000456096 GNEQ9Y223 722 aaKnown RBP19.83■□□□□ 0.77
TVP23A-202ENST00000456096 TTC28Q96AY4 2481 aa19.83■□□□□ 0.76
TVP23A-202ENST00000456096 TLR3O15455 904 aaKnown RBP19.82■□□□□ 0.76
TVP23A-202ENST00000456096 RANBP6O60518 1105 aaKnown RBP19.82■□□□□ 0.76
TVP23A-202ENST00000456096 ACRP10323 421 aa19.82■□□□□ 0.76
TVP23A-202ENST00000456096 PTGS1P23219 599 aa19.82■□□□□ 0.76
TVP23A-202ENST00000456096 MUM1L1Q5H9M0 696 aa19.82■□□□□ 0.76
TVP23A-202ENST00000456096 VPS53Q5VIR6 699 aa19.82■□□□□ 0.76
TVP23A-202ENST00000456096 CXCL17Q6UXB2 119 aa19.82■□□□□ 0.76
TVP23A-202ENST00000456096 TMEM199Q8N511 208 aa19.82■□□□□ 0.76
TVP23A-202ENST00000456096 TIFAQ96CG3 184 aa19.82■□□□□ 0.76
TVP23A-202ENST00000456096 PDGFCQ9NRA1 345 aa19.82■□□□□ 0.76
TVP23A-202ENST00000456096 CYP39A1Q9NYL5 469 aa19.82■□□□□ 0.76
TVP23A-202ENST00000456096 MTMR7Q9Y216 660 aa19.82■□□□□ 0.76
TVP23A-202ENST00000456096 SALL3Q9BXA9 1300 aa19.81■□□□□ 0.76
TVP23A-202ENST00000456096 CHD7Q9P2D1 2997 aa19.81■□□□□ 0.76
TVP23A-202ENST00000456096 GRXCR1A8MXD5 290 aa19.81■□□□□ 0.76
TVP23A-202ENST00000456096 DYNC1LI2O43237 492 aaPredicted RBP19.81■□□□□ 0.76
TVP23A-202ENST00000456096 CD4P01730 458 aa19.81■□□□□ 0.76
TVP23A-202ENST00000456096 SMPD1P17405 629 aa19.81■□□□□ 0.76
TVP23A-202ENST00000456096 CYP2C18P33260 490 aa19.81■□□□□ 0.76
TVP23A-202ENST00000456096 FSCN1Q16658 493 aaKnown RBP19.81■□□□□ 0.76
TVP23A-202ENST00000456096 RASIP1Q5U651 963 aa19.81■□□□□ 0.76
TVP23A-202ENST00000456096 EEPD1Q7L9B9 569 aa19.81■□□□□ 0.76
TVP23A-202ENST00000456096 TLK2Q86UE8 772 aa19.81■□□□□ 0.76
TVP23A-202ENST00000456096 PURBQ96QR8 312 aaKnown RBP19.81■□□□□ 0.76
TVP23A-202ENST00000456096 AP5M1Q9H0R1 490 aa19.81■□□□□ 0.76
TVP23A-202ENST00000456096 ZNF576Q9H609 170 aa19.81■□□□□ 0.76
TVP23A-202ENST00000456096 ANAPC4Q9UJX5 808 aa19.81■□□□□ 0.76
TVP23A-202ENST00000456096 PBX2P40425 430 aa19.8■□□□□ 0.76
TVP23A-202ENST00000456096 TMEM63BQ5T3F8 832 aa19.8■□□□□ 0.76
TVP23A-202ENST00000456096 TAPT1Q6NXT6 567 aa19.8■□□□□ 0.76
TVP23A-202ENST00000456096 NSMFQ6X4W1 530 aa19.8■□□□□ 0.76
TVP23A-202ENST00000456096 ZNF365Q70YC5 407 aa19.8■□□□□ 0.76
TVP23A-202ENST00000456096 FBXO16Q8IX29 292 aaPredicted RBP19.8■□□□□ 0.76
TVP23A-202ENST00000456096 SLC43A3Q8NBI5 491 aa19.8■□□□□ 0.76
TVP23A-202ENST00000456096 CCPG1Q9ULG6 757 aa19.8■□□□□ 0.76
TVP23A-202ENST00000456096 MYO9BQ13459 2157 aa19.8■□□□□ 0.76
TVP23A-202ENST00000456096 LRRC37A2A6NM11 1700 aa19.79■□□□□ 0.76
TVP23A-202ENST00000456096 GRIN2DO15399 1336 aa19.79■□□□□ 0.76
TVP23A-202ENST00000456096 CABYRO75952 493 aa19.79■□□□□ 0.76
TVP23A-202ENST00000456096 NOVP48745 357 aa19.79■□□□□ 0.76
TVP23A-202ENST00000456096 CCDC96Q2M329 555 aa19.79■□□□□ 0.76
TVP23A-202ENST00000456096 IQSEC1Q6DN90 963 aa19.79■□□□□ 0.76
TVP23A-202ENST00000456096 TTBK2Q6IQ55 1244 aa19.79■□□□□ 0.76
TVP23A-202ENST00000456096 PBX4Q9BYU1 374 aa19.79■□□□□ 0.76
TVP23A-202ENST00000456096 LCTP09848 1927 aa19.78■□□□□ 0.76
TVP23A-202ENST00000456096 ORC4O43929 436 aa19.78■□□□□ 0.76
TVP23A-202ENST00000456096 FGRP09769 529 aa19.78■□□□□ 0.76
TVP23A-202ENST00000456096 SLC16A2P36021 539 aa19.78■□□□□ 0.76
TVP23A-202ENST00000456096 ITGA7Q13683 1181 aa19.78■□□□□ 0.76
TVP23A-202ENST00000456096 ANKRD45Q5TZF3 282 aa19.78■□□□□ 0.76
TVP23A-202ENST00000456096 PSRC1Q6PGN9 363 aaPredicted RBP19.78■□□□□ 0.76
TVP23A-202ENST00000456096 USP38Q8NB14 1042 aa19.78■□□□□ 0.76
TVP23A-202ENST00000456096 DCAF4Q8WV16 495 aa19.78■□□□□ 0.76
TVP23A-202ENST00000456096 EVI5LQ96CN4 794 aa19.78■□□□□ 0.76
TVP23A-202ENST00000456096 IL23AQ9NPF7 189 aa19.78■□□□□ 0.76
TVP23A-202ENST00000456096 UMODL1Q5DID0 1318 aa19.77■□□□□ 0.76
TVP23A-202ENST00000456096 ICAM1P05362 532 aa19.77■□□□□ 0.76
TVP23A-202ENST00000456096 ALX1Q15699 326 aa19.77■□□□□ 0.76
TVP23A-202ENST00000456096 TRPV6Q9H1D0 765 aa19.77■□□□□ 0.76
TVP23A-202ENST00000456096 RANBP17Q9H2T7 1088 aaKnown RBP19.77■□□□□ 0.76
TVP23A-202ENST00000456096 HIPK3Q9H422 1215 aa19.77■□□□□ 0.76
TVP23A-202ENST00000456096 HELLSQ9NRZ9 838 aa19.77■□□□□ 0.76
TVP23A-202ENST00000456096 ZBTB47Q9UFB7 747 aaPredicted RBP19.77■□□□□ 0.76
TVP23A-202ENST00000456096 ZEB2O60315 1214 aa19.76■□□□□ 0.75
TVP23A-202ENST00000456096 FGAP02671 866 aa19.76■□□□□ 0.75
TVP23A-202ENST00000456096 PSMC6P62333 389 aa19.76■□□□□ 0.75
TVP23A-202ENST00000456096 BAATQ14032 418 aaPredicted RBP19.76■□□□□ 0.75
TVP23A-202ENST00000456096 BTNL9Q6UXG8 535 aa19.76■□□□□ 0.75
TVP23A-202ENST00000456096 KIAA1211Q6ZU35 1233 aa19.76■□□□□ 0.75
TVP23A-202ENST00000456096 MORC4Q8TE76 937 aa19.76■□□□□ 0.75
TVP23A-202ENST00000456096 TMEM47Q9BQJ4 181 aa19.76■□□□□ 0.75
TVP23A-202ENST00000456096 VTA1Q9NP79 307 aa19.76■□□□□ 0.75
TVP23A-202ENST00000456096 TOMM22Q9NS69 142 aa19.76■□□□□ 0.75
TVP23A-202ENST00000456096 CXXC1Q9P0U4 656 aaPredicted RBP19.76■□□□□ 0.75
TVP23A-202ENST00000456096 Q9Y3F1 56 aa19.76■□□□□ 0.75
TVP23A-202ENST00000456096 B4GALT4O60513 344 aa19.75■□□□□ 0.75
TVP23A-202ENST00000456096 TOP1P11387 765 aaKnown RBP19.75■□□□□ 0.75
TVP23A-202ENST00000456096 CCL23P55773 120 aa19.75■□□□□ 0.75
TVP23A-202ENST00000456096 RRP12Q5JTH9 1297 aaKnown RBP19.75■□□□□ 0.75
TVP23A-202ENST00000456096 SYDE2Q5VT97 1194 aa19.75■□□□□ 0.75
TVP23A-202ENST00000456096 HERVK_113Q902F9 699 aa19.75■□□□□ 0.75
TVP23A-202ENST00000456096 FAM227BQ96M60 508 aa19.75■□□□□ 0.75
TVP23A-202ENST00000456096 GPCPD1Q9NPB8 672 aa19.75■□□□□ 0.75
TVP23A-202ENST00000456096 MUC3AQ02505 3323 aa19.75■□□□□ 0.75
TVP23A-202ENST00000456096 REV3LO60673 3130 aa19.75■□□□□ 0.75
TVP23A-202ENST00000456096 FRMPD2Q68DX3 1309 aaPredicted RBP19.75■□□□□ 0.75
TVP23A-202ENST00000456096 A0A0D9SFI3 127 aa19.74■□□□□ 0.75
TVP23A-202ENST00000456096 NFIBO00712 420 aa19.74■□□□□ 0.75
TVP23A-202ENST00000456096 FGBP02675 491 aa19.74■□□□□ 0.75
TVP23A-202ENST00000456096 PDE1AP54750 535 aa19.74■□□□□ 0.75
TVP23A-202ENST00000456096 NOC4LQ9BVI4 516 aaKnown RBP19.74■□□□□ 0.75
TVP23A-202ENST00000456096 SEZ6LQ9BYH1 1024 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms