RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 ESR2Q92731 530 aa14.05□□□□□ -0.16
PDGFB-204ENST00000455790 TRIM43Q96BQ3 446 aaPredicted RBP14.05□□□□□ -0.16
PDGFB-204ENST00000455790 LBHD1Q9BQE6 289 aaPredicted RBP14.05□□□□□ -0.16
PDGFB-204ENST00000455790 DSCC1Q9BVC3 393 aa14.05□□□□□ -0.16
PDGFB-204ENST00000455790 CPVLQ9H3G5 476 aa14.05□□□□□ -0.16
PDGFB-204ENST00000455790 ABHD16BQ9H3Z7 469 aa14.05□□□□□ -0.16
PDGFB-204ENST00000455790 RNF41Q9H4P4 317 aaPredicted RBP14.05□□□□□ -0.16
PDGFB-204ENST00000455790 B4E1Z4 1266 aa14.04□□□□□ -0.16
PDGFB-204ENST00000455790 HIP1O00291 1037 aa14.04□□□□□ -0.16
PDGFB-204ENST00000455790 CTAGE5O15320 804 aa14.04□□□□□ -0.16
PDGFB-204ENST00000455790 PQBP1O60828 265 aaKnown RBP14.04□□□□□ -0.16
PDGFB-204ENST00000455790 DUSP11O75319 330 aaKnown RBP14.04□□□□□ -0.16
PDGFB-204ENST00000455790 GOLGA8HP0CJ92 632 aa14.04□□□□□ -0.16
PDGFB-204ENST00000455790 ITGB8P26012 769 aa14.04□□□□□ -0.16
PDGFB-204ENST00000455790 ACLYP53396 1101 aa14.04□□□□□ -0.16
PDGFB-204ENST00000455790 KCNA10Q16322 511 aa14.04□□□□□ -0.16
PDGFB-204ENST00000455790 LRIT3Q3SXY7 679 aa14.04□□□□□ -0.16
PDGFB-204ENST00000455790 C1orf53Q5VUE5 145 aa14.04□□□□□ -0.16
PDGFB-204ENST00000455790 UPF3AQ9H1J1 476 aaKnown RBP14.04□□□□□ -0.16
PDGFB-204ENST00000455790 PRKAG2Q9UGJ0 569 aa14.04□□□□□ -0.16
PDGFB-204ENST00000455790 C6orf222P0C671 652 aaPredicted RBP14.03□□□□□ -0.16
PDGFB-204ENST00000455790 CST5P28325 142 aaPredicted RBP14.03□□□□□ -0.16
PDGFB-204ENST00000455790 TMEM63BQ5T3F8 832 aa14.03□□□□□ -0.16
PDGFB-204ENST00000455790 SLC30A10Q6XR72 485 aa14.03□□□□□ -0.16
PDGFB-204ENST00000455790 Q7L0L9 218 aa14.03□□□□□ -0.16
PDGFB-204ENST00000455790 EEPD1Q7L9B9 569 aa14.03□□□□□ -0.16
PDGFB-204ENST00000455790 FBXO16Q8IX29 292 aaPredicted RBP14.03□□□□□ -0.16
PDGFB-204ENST00000455790 CLEC4DQ8WXI8 215 aa14.03□□□□□ -0.16
PDGFB-204ENST00000455790 BADQ92934 168 aa14.03□□□□□ -0.16
PDGFB-204ENST00000455790 TTC14Q96N46 770 aa14.03□□□□□ -0.16
PDGFB-204ENST00000455790 TSEN34Q9BSV6 310 aaKnown RBP14.03□□□□□ -0.16
PDGFB-204ENST00000455790 PDGFCQ9NRA1 345 aa14.03□□□□□ -0.16
PDGFB-204ENST00000455790 CLTBP09497 229 aa14.02□□□□□ -0.17
PDGFB-204ENST00000455790 GJA9P57773 515 aa14.02□□□□□ -0.17
PDGFB-204ENST00000455790 BEX3Q00994 111 aa14.02□□□□□ -0.17
PDGFB-204ENST00000455790 BAATQ14032 418 aaPredicted RBP14.02□□□□□ -0.17
PDGFB-204ENST00000455790 C9orf50Q5SZB4 431 aa14.02□□□□□ -0.17
PDGFB-204ENST00000455790 ENAHQ8N8S7 591 aaPredicted RBP14.02□□□□□ -0.17
PDGFB-204ENST00000455790 STARD7Q9NQZ5 370 aa14.02□□□□□ -0.17
PDGFB-204ENST00000455790 TNKSO95271 1327 aa14.01□□□□□ -0.17
PDGFB-204ENST00000455790 MOXD2PA6NHM9 499 aa14.01□□□□□ -0.17
PDGFB-204ENST00000455790 ASB14A6NK59 587 aa14.01□□□□□ -0.17
PDGFB-204ENST00000455790 ASGR1P07306 291 aa14.01□□□□□ -0.17
PDGFB-204ENST00000455790 SMPD1P17405 629 aa14.01□□□□□ -0.17
PDGFB-204ENST00000455790 IMMTQ16891 758 aaKnown RBP14.01□□□□□ -0.17
PDGFB-204ENST00000455790 TAPT1Q6NXT6 567 aa14.01□□□□□ -0.17
PDGFB-204ENST00000455790 DGKHQ86XP1 1220 aa14.01□□□□□ -0.17
PDGFB-204ENST00000455790 PNMA1Q8ND90 353 aa14.01□□□□□ -0.17
PDGFB-204ENST00000455790 ZSCAN10Q96SZ4 725 aaPredicted RBP14.01□□□□□ -0.17
PDGFB-204ENST00000455790 UBA5Q9GZZ9 404 aa14.01□□□□□ -0.17
PDGFB-204ENST00000455790 ZSWIM5Q9P217 1185 aa14.01□□□□□ -0.17
PDGFB-204ENST00000455790 GNEQ9Y223 722 aaKnown RBP14.01□□□□□ -0.17
PDGFB-204ENST00000455790 TAF6LQ9Y6J9 622 aa14.01□□□□□ -0.17
PDGFB-204ENST00000455790 WDR19Q8NEZ3 1342 aa14□□□□□ -0.17
PDGFB-204ENST00000455790 RAD50Q92878 1312 aa14□□□□□ -0.17
PDGFB-204ENST00000455790 PTPDC1A2A3K4 754 aa14□□□□□ -0.17
PDGFB-204ENST00000455790 CHMLP26374 656 aa14□□□□□ -0.17
PDGFB-204ENST00000455790 ALDH5A1P51649 535 aaPredicted RBP14□□□□□ -0.17
PDGFB-204ENST00000455790 EPHB4P54760 987 aa14□□□□□ -0.17
PDGFB-204ENST00000455790 TNFAIP2Q03169 654 aa14□□□□□ -0.17
PDGFB-204ENST00000455790 PTH1RQ03431 593 aa14□□□□□ -0.17
PDGFB-204ENST00000455790 FAAP100Q0VG06 881 aa14□□□□□ -0.17
PDGFB-204ENST00000455790 SHHQ15465 462 aa14□□□□□ -0.17
PDGFB-204ENST00000455790 GNASQ5JWF2 1037 aa14□□□□□ -0.17
PDGFB-204ENST00000455790 NOL8Q76FK4 1167 aaKnown RBP14□□□□□ -0.17
PDGFB-204ENST00000455790 ANKRD33Q7Z3H0 272 aa14□□□□□ -0.17
PDGFB-204ENST00000455790 TLK2Q86UE8 772 aa14□□□□□ -0.17
PDGFB-204ENST00000455790 IQCA1Q86XH1 822 aa14□□□□□ -0.17
PDGFB-204ENST00000455790 DEFB123Q8N688 67 aa14□□□□□ -0.17
PDGFB-204ENST00000455790 MORC4Q8TE76 937 aa14□□□□□ -0.17
PDGFB-204ENST00000455790 NUP133Q8WUM0 1156 aa14□□□□□ -0.17
PDGFB-204ENST00000455790 ANKS1AQ92625 1134 aa14□□□□□ -0.17
PDGFB-204ENST00000455790 KAT14Q9H8E8 782 aa14□□□□□ -0.17
PDGFB-204ENST00000455790 CTNNA3Q9UI47 895 aa14□□□□□ -0.17
PDGFB-204ENST00000455790 KIAA0355O15063 1070 aa13.99□□□□□ -0.17
PDGFB-204ENST00000455790 CALML3P27482 149 aa13.99□□□□□ -0.17
PDGFB-204ENST00000455790 NKX3-2P78367 333 aa13.99□□□□□ -0.17
PDGFB-204ENST00000455790 USH1GQ495M9 461 aa13.99□□□□□ -0.17
PDGFB-204ENST00000455790 GPATCH4Q5T3I0 446 aaKnown RBP13.99□□□□□ -0.17
PDGFB-204ENST00000455790 CYB5R4Q7L1T6 521 aa13.99□□□□□ -0.17
PDGFB-204ENST00000455790 GLT1D1Q96MS3 346 aa13.99□□□□□ -0.17
PDGFB-204ENST00000455790 SPC25Q9HBM1 224 aa13.99□□□□□ -0.17
PDGFB-204ENST00000455790 ELP1O95163 1332 aa13.98□□□□□ -0.17
PDGFB-204ENST00000455790 RPS6P62753 249 aaKnown RBP13.98□□□□□ -0.17
PDGFB-204ENST00000455790 CDC37Q16543 378 aaPredicted RBP13.98□□□□□ -0.17
PDGFB-204ENST00000455790 GPR153Q6NV75 609 aa13.98□□□□□ -0.17
PDGFB-204ENST00000455790 CXCL17Q6UXB2 119 aa13.98□□□□□ -0.17
PDGFB-204ENST00000455790 RNF207Q6ZRF8 634 aa13.98□□□□□ -0.17
PDGFB-204ENST00000455790 PCSK9Q8NBP7 692 aaKnown RBP13.98□□□□□ -0.17
PDGFB-204ENST00000455790 KRT23Q9C075 422 aa13.98□□□□□ -0.17
PDGFB-204ENST00000455790 VTA1Q9NP79 307 aa13.98□□□□□ -0.17
PDGFB-204ENST00000455790 TMEM39AQ9NV64 488 aa13.98□□□□□ -0.17
PDGFB-204ENST00000455790 TBX21Q9UL17 535 aa13.98□□□□□ -0.17
PDGFB-204ENST00000455790 A0A0U1RQG5 324 aaPredicted RBP13.97□□□□□ -0.17
PDGFB-204ENST00000455790 DCDC2CA8MYV0 355 aa13.97□□□□□ -0.17
PDGFB-204ENST00000455790 DYNC1LI2O43237 492 aaPredicted RBP13.97□□□□□ -0.17
PDGFB-204ENST00000455790 CYP21A2P08686 494 aa13.97□□□□□ -0.17
PDGFB-204ENST00000455790 RAG1P15918 1043 aa13.97□□□□□ -0.17
PDGFB-204ENST00000455790 NT5C2P49902 561 aa13.97□□□□□ -0.17
PDGFB-204ENST00000455790 CDK7P50613 346 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms