RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 MOXD2PA6NHM9 499 aa18.98■□□□□ 0.63
GPC1-206ENST00000455111 C6orf222P0C671 652 aaPredicted RBP18.98■□□□□ 0.63
GPC1-206ENST00000455111 C16orf59Q7L2K0 433 aa18.98■□□□□ 0.63
GPC1-206ENST00000455111 EXOC6Q8TAG9 804 aa18.98■□□□□ 0.63
GPC1-206ENST00000455111 IL25Q9H293 177 aa18.98■□□□□ 0.63
GPC1-206ENST00000455111 TCP11L1Q9NUJ3 509 aa18.98■□□□□ 0.63
GPC1-206ENST00000455111 ISY1Q9ULR0 285 aaKnown RBP18.98■□□□□ 0.63
GPC1-206ENST00000455111 CTDP1Q9Y5B0 961 aaPredicted RBP18.98■□□□□ 0.63
GPC1-206ENST00000455111 GRIN2DO15399 1336 aa18.98■□□□□ 0.63
GPC1-206ENST00000455111 CCDC171Q6TFL3 1326 aa18.98■□□□□ 0.63
GPC1-206ENST00000455111 GBF1Q92538 1859 aa18.97■□□□□ 0.63
GPC1-206ENST00000455111 SMPD1P17405 629 aa18.97■□□□□ 0.63
GPC1-206ENST00000455111 RRP12Q5JTH9 1297 aaKnown RBP18.97■□□□□ 0.63
GPC1-206ENST00000455111 DCAF4Q8WV16 495 aa18.97■□□□□ 0.63
GPC1-206ENST00000455111 YTHDC1Q96MU7 727 aaKnown RBP18.97■□□□□ 0.63
GPC1-206ENST00000455111 NFIBO00712 420 aa18.96■□□□□ 0.63
GPC1-206ENST00000455111 ICAM1P05362 532 aa18.96■□□□□ 0.63
GPC1-206ENST00000455111 SNHG28P0DPA3 235 aa18.96■□□□□ 0.63
GPC1-206ENST00000455111 PDHBP11177 359 aa18.96■□□□□ 0.63
GPC1-206ENST00000455111 SDSP20132 328 aa18.96■□□□□ 0.63
GPC1-206ENST00000455111 IKQ13123 557 aaPredicted RBP18.96■□□□□ 0.63
GPC1-206ENST00000455111 TKFCQ3LXA3 575 aa18.96■□□□□ 0.63
GPC1-206ENST00000455111 FBXO16Q8IX29 292 aaPredicted RBP18.96■□□□□ 0.63
GPC1-206ENST00000455111 FAM126BQ8IXS8 530 aa18.96■□□□□ 0.63
GPC1-206ENST00000455111 MORC4Q8TE76 937 aa18.96■□□□□ 0.63
GPC1-206ENST00000455111 CLEC4DQ8WXI8 215 aa18.96■□□□□ 0.63
GPC1-206ENST00000455111 OSBPL3Q9H4L5 887 aa18.96■□□□□ 0.63
GPC1-206ENST00000455111 GPCPD1Q9NPB8 672 aa18.96■□□□□ 0.63
GPC1-206ENST00000455111 TMEM39AQ9NV64 488 aa18.96■□□□□ 0.63
GPC1-206ENST00000455111 ELP1O95163 1332 aa18.96■□□□□ 0.63
GPC1-206ENST00000455111 TOP1P11387 765 aaKnown RBP18.95■□□□□ 0.62
GPC1-206ENST00000455111 NUCB1Q02818 461 aa18.95■□□□□ 0.62
GPC1-206ENST00000455111 CCDC96Q2M329 555 aa18.95■□□□□ 0.62
GPC1-206ENST00000455111 EEPD1Q7L9B9 569 aa18.95■□□□□ 0.62
GPC1-206ENST00000455111 SLC43A3Q8NBI5 491 aa18.95■□□□□ 0.62
GPC1-206ENST00000455111 RILPL2Q969X0 211 aa18.95■□□□□ 0.62
GPC1-206ENST00000455111 CPVLQ9H3G5 476 aa18.95■□□□□ 0.62
GPC1-206ENST00000455111 SEMA6BQ9H3T3 888 aa18.95■□□□□ 0.62
GPC1-206ENST00000455111 CCPG1Q9ULG6 757 aa18.95■□□□□ 0.62
GPC1-206ENST00000455111 A0A0C4DFX4 3053 aa18.94■□□□□ 0.62
GPC1-206ENST00000455111 TRIM6-TRIM34B2RNG4 842 aa18.94■□□□□ 0.62
GPC1-206ENST00000455111 ARVCFO00192 962 aa18.94■□□□□ 0.62
GPC1-206ENST00000455111 TIMP1P01033 207 aa18.94■□□□□ 0.62
GPC1-206ENST00000455111 CD4P01730 458 aa18.94■□□□□ 0.62
GPC1-206ENST00000455111 RAG1P15918 1043 aa18.94■□□□□ 0.62
GPC1-206ENST00000455111 TNFAIP2Q03169 654 aa18.94■□□□□ 0.62
GPC1-206ENST00000455111 BAATQ14032 418 aaPredicted RBP18.94■□□□□ 0.62
GPC1-206ENST00000455111 GNASQ5JWF2 1037 aa18.94■□□□□ 0.62
GPC1-206ENST00000455111 AKNAD1Q5T1N1 836 aa18.94■□□□□ 0.62
GPC1-206ENST00000455111 SYDE2Q5VT97 1194 aa18.94■□□□□ 0.62
GPC1-206ENST00000455111 NSMFQ6X4W1 530 aa18.94■□□□□ 0.62
GPC1-206ENST00000455111 SLC30A10Q6XR72 485 aa18.94■□□□□ 0.62
GPC1-206ENST00000455111 CHD1LQ86WJ1 897 aa18.94■□□□□ 0.62
GPC1-206ENST00000455111 NUP133Q8WUM0 1156 aa18.94■□□□□ 0.62
GPC1-206ENST00000455111 VWCEQ96DN2 955 aa18.94■□□□□ 0.62
GPC1-206ENST00000455111 CDX2Q99626 313 aaPredicted RBP18.94■□□□□ 0.62
GPC1-206ENST00000455111 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.94■□□□□ 0.62
GPC1-206ENST00000455111 ZKSCAN3Q9BRR0 538 aa18.94■□□□□ 0.62
GPC1-206ENST00000455111 UMODL1Q5DID0 1318 aa18.94■□□□□ 0.62
GPC1-206ENST00000455111 SMAD3P84022 425 aaKnown RBP18.93■□□□□ 0.62
GPC1-206ENST00000455111 FPGSQ05932 587 aa18.93■□□□□ 0.62
GPC1-206ENST00000455111 ZNF543Q08ER8 600 aa18.93■□□□□ 0.62
GPC1-206ENST00000455111 CXCL17Q6UXB2 119 aa18.93■□□□□ 0.62
GPC1-206ENST00000455111 TLK2Q86UE8 772 aa18.93■□□□□ 0.62
GPC1-206ENST00000455111 TICAM2Q86XR7 235 aa18.93■□□□□ 0.62
GPC1-206ENST00000455111 GLT1D1Q96MS3 346 aa18.93■□□□□ 0.62
GPC1-206ENST00000455111 TOMM22Q9NS69 142 aa18.93■□□□□ 0.62
GPC1-206ENST00000455111 PRUNE2Q8WUY3 3088 aa18.92■□□□□ 0.62
GPC1-206ENST00000455111 ASB14A6NK59 587 aa18.92■□□□□ 0.62
GPC1-206ENST00000455111 RBAK-RBAKDNI3L0D1 243 aa18.92■□□□□ 0.62
GPC1-206ENST00000455111 DLL1O00548 723 aa18.92■□□□□ 0.62
GPC1-206ENST00000455111 PPP4R3BQ5MIZ7 849 aa18.92■□□□□ 0.62
GPC1-206ENST00000455111 ZNF697Q5TEC3 545 aa18.92■□□□□ 0.62
GPC1-206ENST00000455111 PCSK9Q8NBP7 692 aaKnown RBP18.92■□□□□ 0.62
GPC1-206ENST00000455111 A0A0U1RQG5 324 aaPredicted RBP18.91■□□□□ 0.62
GPC1-206ENST00000455111 DCDC2CA8MYV0 355 aa18.91■□□□□ 0.62
GPC1-206ENST00000455111 GOLGA8HP0CJ92 632 aa18.91■□□□□ 0.62
GPC1-206ENST00000455111 PDE4AP27815 886 aa18.91■□□□□ 0.62
GPC1-206ENST00000455111 ALDH5A1P51649 535 aaPredicted RBP18.91■□□□□ 0.62
GPC1-206ENST00000455111 RASIP1Q5U651 963 aa18.91■□□□□ 0.62
GPC1-206ENST00000455111 MFSD5Q6N075 450 aa18.91■□□□□ 0.62
GPC1-206ENST00000455111 RNPC3Q96LT9 517 aaKnown RBP18.91■□□□□ 0.62
GPC1-206ENST00000455111 ZBTB47Q9UFB7 747 aaPredicted RBP18.91■□□□□ 0.62
GPC1-206ENST00000455111 CHD9Q3L8U1 2897 aa18.91■□□□□ 0.62
GPC1-206ENST00000455111 MYH6P13533 1939 aa18.9■□□□□ 0.62
GPC1-206ENST00000455111 SCN5AQ14524 2016 aa18.9■□□□□ 0.62
GPC1-206ENST00000455111 DYNC1LI2O43237 492 aaPredicted RBP18.9■□□□□ 0.62
GPC1-206ENST00000455111 CSF2RAP15509 400 aa18.9■□□□□ 0.62
GPC1-206ENST00000455111 PSMC6P62333 389 aa18.9■□□□□ 0.62
GPC1-206ENST00000455111 TMEM240Q5SV17 173 aa18.9■□□□□ 0.62
GPC1-206ENST00000455111 CWC27Q6UX04 472 aaKnown RBP18.9■□□□□ 0.62
GPC1-206ENST00000455111 MYLIPQ8WY64 445 aa18.9■□□□□ 0.62
GPC1-206ENST00000455111 TBC1D5Q92609 795 aa18.9■□□□□ 0.62
GPC1-206ENST00000455111 PPP1R12CQ9BZL4 782 aa18.9■□□□□ 0.62
GPC1-206ENST00000455111 RWDD1Q9H446 243 aaPredicted RBP18.9■□□□□ 0.62
GPC1-206ENST00000455111 SPTBN5Q9NRC6 3674 aaKnown RBP18.9■□□□□ 0.62
GPC1-206ENST00000455111 RBM47A0AV96 593 aaKnown RBP18.89■□□□□ 0.61
GPC1-206ENST00000455111 GRXCR1A8MXD5 290 aa18.89■□□□□ 0.61
GPC1-206ENST00000455111 ACRP10323 421 aa18.89■□□□□ 0.61
GPC1-206ENST00000455111 CYP2C18P33260 490 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms