RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 APBA1Q02410 837 aa15.39■□□□□ 0.05
UBE2D3-210ENST00000453744 NLRP10Q86W26 655 aa15.39■□□□□ 0.05
UBE2D3-210ENST00000453744 TSG101Q99816 390 aa15.39■□□□□ 0.05
UBE2D3-210ENST00000453744 UBA5Q9GZZ9 404 aa15.39■□□□□ 0.05
UBE2D3-210ENST00000453744 VIPAS39Q9H9C1 493 aa15.39■□□□□ 0.05
UBE2D3-210ENST00000453744 STIM2Q9P246 746 aa15.39■□□□□ 0.05
UBE2D3-210ENST00000453744 PCDHA13Q9Y5I0 950 aa15.39■□□□□ 0.05
UBE2D3-210ENST00000453744 SLIT1O75093 1534 aa15.39■□□□□ 0.05
UBE2D3-210ENST00000453744 TRAF5O00463 557 aa15.38■□□□□ 0.05
UBE2D3-210ENST00000453744 HGSO14964 777 aaPredicted RBP15.38■□□□□ 0.05
UBE2D3-210ENST00000453744 GOLGA8HP0CJ92 632 aa15.38■□□□□ 0.05
UBE2D3-210ENST00000453744 TECP42680 631 aa15.38■□□□□ 0.05
UBE2D3-210ENST00000453744 KIF11P52732 1056 aa15.38■□□□□ 0.05
UBE2D3-210ENST00000453744 PAK2Q13177 524 aa15.38■□□□□ 0.05
UBE2D3-210ENST00000453744 FBXO3Q9UK99 471 aa15.38■□□□□ 0.05
UBE2D3-210ENST00000453744 AKAP12Q02952 1782 aa15.38■□□□□ 0.05
UBE2D3-210ENST00000453744 PSMD14O00487 310 aa15.38■□□□□ 0.05
UBE2D3-210ENST00000453744 PMS1P54277 932 aaKnown RBP15.38■□□□□ 0.05
UBE2D3-210ENST00000453744 LRRC41Q15345 812 aa15.38■□□□□ 0.05
UBE2D3-210ENST00000453744 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.38■□□□□ 0.05
UBE2D3-210ENST00000453744 PCDH11XQ9BZA7 1347 aa15.38■□□□□ 0.05
UBE2D3-210ENST00000453744 PCDH11YQ9BZA8 1340 aa15.38■□□□□ 0.05
UBE2D3-210ENST00000453744 CEP104O60308 925 aa15.38■□□□□ 0.05
UBE2D3-210ENST00000453744 ECM2O94769 699 aaPredicted RBP15.38■□□□□ 0.05
UBE2D3-210ENST00000453744 IL2RBP14784 551 aa15.38■□□□□ 0.05
UBE2D3-210ENST00000453744 ISCA1Q9BUE6 129 aa15.38■□□□□ 0.05
UBE2D3-210ENST00000453744 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.38■□□□□ 0.05
UBE2D3-210ENST00000453744 ITIH6Q6UXX5 1313 aa15.37■□□□□ 0.05
UBE2D3-210ENST00000453744 EIF3HO15372 352 aaKnown RBP eCLIP15.37■□□□□ 0.05
UBE2D3-210ENST00000453744 GBP2P32456 591 aaPredicted RBP15.37■□□□□ 0.05
UBE2D3-210ENST00000453744 ZNF444Q8N0Y2 327 aaPredicted RBP15.37■□□□□ 0.05
UBE2D3-210ENST00000453744 STAG1Q8WVM7 1258 aa15.37■□□□□ 0.05
UBE2D3-210ENST00000453744 SPAG5Q96R06 1193 aa15.37■□□□□ 0.05
UBE2D3-210ENST00000453744 PRPF3O43395 683 aaKnown RBP15.37■□□□□ 0.05
UBE2D3-210ENST00000453744 GIGYF2Q6Y7W6 1299 aaKnown RBP15.37■□□□□ 0.05
UBE2D3-210ENST00000453744 P2RX5Q93086 422 aa15.37■□□□□ 0.05
UBE2D3-210ENST00000453744 OSBPL9Q96SU4 736 aa15.37■□□□□ 0.05
UBE2D3-210ENST00000453744 CPVLQ9H3G5 476 aa15.37■□□□□ 0.05
UBE2D3-210ENST00000453744 REXO2Q9Y3B8 237 aaKnown RBP15.37■□□□□ 0.05
UBE2D3-210ENST00000453744 CAPN6Q9Y6Q1 641 aa15.37■□□□□ 0.05
UBE2D3-210ENST00000453744 KDM6AO15550 1401 aaPredicted RBP15.37■□□□□ 0.05
UBE2D3-210ENST00000453744 RCCD1A6NED2 376 aa15.37■□□□□ 0.05
UBE2D3-210ENST00000453744 NELFCDQ8IXH7 590 aa15.37■□□□□ 0.05
UBE2D3-210ENST00000453744 DISC1Q9NRI5 854 aa15.37■□□□□ 0.05
UBE2D3-210ENST00000453744 CAPN11Q9UMQ6 739 aa15.37■□□□□ 0.05
UBE2D3-210ENST00000453744 CLSTN1O94985 981 aa15.36■□□□□ 0.05
UBE2D3-210ENST00000453744 FCER1AP12319 257 aa15.36■□□□□ 0.05
UBE2D3-210ENST00000453744 SF3B2Q13435 895 aaKnown RBP15.36■□□□□ 0.05
UBE2D3-210ENST00000453744 SELENOSQ9BQE4 189 aa15.36■□□□□ 0.05
UBE2D3-210ENST00000453744 KANSL2Q9H9L4 492 aa15.36■□□□□ 0.05
UBE2D3-210ENST00000453744 NR1D1P20393 614 aa15.36■□□□□ 0.05
UBE2D3-210ENST00000453744 ARID4AP29374 1257 aaPredicted RBP15.36■□□□□ 0.05
UBE2D3-210ENST00000453744 DZIP1Q86YF9 867 aaKnown RBP15.36■□□□□ 0.05
UBE2D3-210ENST00000453744 SNX12Q9UMY4 172 aa15.36■□□□□ 0.05
UBE2D3-210ENST00000453744 KCNK3O14649 394 aa15.36■□□□□ 0.05
UBE2D3-210ENST00000453744 FGFR1OPO95684 399 aaKnown RBP15.36■□□□□ 0.05
UBE2D3-210ENST00000453744 HSPA2P54652 639 aa15.36■□□□□ 0.05
UBE2D3-210ENST00000453744 ATP2C1P98194 919 aaPredicted RBP15.36■□□□□ 0.05
UBE2D3-210ENST00000453744 GFPT1Q06210 699 aaPredicted RBP15.36■□□□□ 0.05
UBE2D3-210ENST00000453744 CCDC152Q4G0S7 254 aa15.36■□□□□ 0.05
UBE2D3-210ENST00000453744 LRP10Q7Z4F1 713 aa15.36■□□□□ 0.05
UBE2D3-210ENST00000453744 BMP2KQ9NSY1 1161 aaPredicted RBP15.36■□□□□ 0.05
UBE2D3-210ENST00000453744 ZBTB1Q9Y2K1 713 aa15.36■□□□□ 0.05
UBE2D3-210ENST00000453744 ZSCAN5CA6NGD5 496 aaPredicted RBP15.35■□□□□ 0.05
UBE2D3-210ENST00000453744 RPSAP08865 295 aaKnown RBP15.35■□□□□ 0.05
UBE2D3-210ENST00000453744 AMPD2Q01433 879 aa15.35■□□□□ 0.05
UBE2D3-210ENST00000453744 FNBP4Q8N3X1 1017 aaPredicted RBP15.35■□□□□ 0.05
UBE2D3-210ENST00000453744 CRNKL1Q9BZJ0 848 aaKnown RBP15.35■□□□□ 0.05
UBE2D3-210ENST00000453744 NIP7Q9Y221 180 aaKnown RBP eCLIP15.35■□□□□ 0.05
UBE2D3-210ENST00000453744 PLCG1P19174 1290 aa15.35■□□□□ 0.05
UBE2D3-210ENST00000453744 LONP1P36776 959 aaKnown RBP15.35■□□□□ 0.05
UBE2D3-210ENST00000453744 CARSP49589 748 aaKnown RBP15.35■□□□□ 0.05
UBE2D3-210ENST00000453744 NAA25Q14CX7 972 aa15.35■□□□□ 0.05
UBE2D3-210ENST00000453744 APTXQ7Z2E3 356 aaKnown RBP15.35■□□□□ 0.05
UBE2D3-210ENST00000453744 ZIM3Q96PE6 472 aa15.35■□□□□ 0.05
UBE2D3-210ENST00000453744 PHF20Q9BVI0 1012 aa15.35■□□□□ 0.05
UBE2D3-210ENST00000453744 SEC63Q9UGP8 760 aaKnown RBP15.35■□□□□ 0.05
UBE2D3-210ENST00000453744 GCOM1H8Y6P7 765 aaPredicted RBP15.35■□□□□ 0.05
UBE2D3-210ENST00000453744 CCDC172P0C7W6 258 aa15.35■□□□□ 0.05
UBE2D3-210ENST00000453744 MYZAPP0CAP1 466 aa15.35■□□□□ 0.05
UBE2D3-210ENST00000453744 TNNC1P63316 161 aa15.35■□□□□ 0.05
UBE2D3-210ENST00000453744 TFAP4Q01664 338 aa15.35■□□□□ 0.05
UBE2D3-210ENST00000453744 ADAT2Q7Z6V5 191 aaKnown RBP15.35■□□□□ 0.05
UBE2D3-210ENST00000453744 SRBD1Q8N5C6 995 aaKnown RBP15.35■□□□□ 0.05
UBE2D3-210ENST00000453744 ARFGAP2Q8N6H7 521 aa15.35■□□□□ 0.05
UBE2D3-210ENST00000453744 RBM12Q9NTZ6 932 aaKnown RBP15.35■□□□□ 0.05
UBE2D3-210ENST00000453744 BAIAP2L1Q9UHR4 511 aa15.35■□□□□ 0.05
UBE2D3-210ENST00000453744 TARSL2A2RTX5 802 aaKnown RBP15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 TSPY3P0CV98 308 aa15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 TSPY8P0CW00 308 aa15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 CTNNA1P35221 906 aaKnown RBP15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 PNMA8AQ86V59 439 aaPredicted RBP15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 CCDC170Q8IYT3 715 aa15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 PLCD4Q9BRC7 762 aa15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 MAP3K15Q6ZN16 1313 aa15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 VEGFAP15692 232 aaPredicted RBP15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 PBX1P40424 430 aa15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 PPP2R5BQ15173 497 aa15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 KIAA0753Q2KHM9 967 aa15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 NAA35Q5VZE5 725 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms