RNA–Protein interactions for RNA: ENST00000451987.5

SPC25-202, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 3

Gene SPC25, Length 596 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-202ENST00000451987 FRAT1Q92837 279 aaPredicted RBP4.23□□□□□ -1.73
SPC25-202ENST00000451987 WNT8BQ93098 351 aa4.23□□□□□ -1.73
SPC25-202ENST00000451987 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.23□□□□□ -1.73
SPC25-202ENST00000451987 FOXD3Q9UJU5 478 aaPredicted RBP4.23□□□□□ -1.73
SPC25-202ENST00000451987 MRPL42Q9Y6G3 142 aaKnown RBP4.23□□□□□ -1.73
SPC25-202ENST00000451987 U3KQE9 123 aa4.23□□□□□ -1.73
SPC25-202ENST00000451987 PXDNLA1KZ92 1463 aa4.23□□□□□ -1.73
SPC25-202ENST00000451987 ADAMTS7Q9UKP4 1686 aa4.22□□□□□ -1.73
SPC25-202ENST00000451987 STRCQ7RTU9 1775 aa4.22□□□□□ -1.73
SPC25-202ENST00000451987 DYNC1LI2O43237 492 aaPredicted RBP4.22□□□□□ -1.73
SPC25-202ENST00000451987 RAB11FIP3O75154 756 aa4.22□□□□□ -1.73
SPC25-202ENST00000451987 GADD45BO75293 160 aaPredicted RBP4.22□□□□□ -1.73
SPC25-202ENST00000451987 VAMP4O75379 141 aa4.22□□□□□ -1.73
SPC25-202ENST00000451987 BCAR3O75815 825 aa4.22□□□□□ -1.73
SPC25-202ENST00000451987 RNASE1P07998 156 aaKnown RBP4.22□□□□□ -1.73
SPC25-202ENST00000451987 TRIM27P14373 513 aa4.22□□□□□ -1.73
SPC25-202ENST00000451987 C19orf57Q0VDD7 668 aa4.22□□□□□ -1.73
SPC25-202ENST00000451987 TAF7Q15545 349 aaPredicted RBP4.22□□□□□ -1.73
SPC25-202ENST00000451987 AKAP4Q5JQC9 854 aa4.22□□□□□ -1.73
SPC25-202ENST00000451987 CCDC30Q5VVM6 783 aa4.22□□□□□ -1.73
SPC25-202ENST00000451987 USPL1Q5W0Q7 1092 aa4.22□□□□□ -1.73
SPC25-202ENST00000451987 VN1R5Q7Z5H4 357 aa4.22□□□□□ -1.73
SPC25-202ENST00000451987 SSH1Q8WYL5 1049 aa4.22□□□□□ -1.73
SPC25-202ENST00000451987 GCC1Q96CN9 775 aa4.22□□□□□ -1.73
SPC25-202ENST00000451987 GPATCH3Q96I76 525 aa4.22□□□□□ -1.73
SPC25-202ENST00000451987 PHACTR3Q96KR7 559 aa4.22□□□□□ -1.73
SPC25-202ENST00000451987 STK31Q9BXU1 1019 aa4.22□□□□□ -1.73
SPC25-202ENST00000451987 TRIM55Q9BYV6 548 aa4.22□□□□□ -1.73
SPC25-202ENST00000451987 ZNF408Q9H9D4 720 aa4.22□□□□□ -1.73
SPC25-202ENST00000451987 ELP3Q9H9T3 547 aa4.22□□□□□ -1.73
SPC25-202ENST00000451987 UPF2Q9HAU5 1272 aaKnown RBP4.22□□□□□ -1.73
SPC25-202ENST00000451987 NPHS2Q9NP85 383 aa4.22□□□□□ -1.73
SPC25-202ENST00000451987 COPRSQ9NQ92 184 aa4.22□□□□□ -1.73
SPC25-202ENST00000451987 MBNL3Q9NUK0 354 aaKnown RBP4.22□□□□□ -1.73
SPC25-202ENST00000451987 DZANK1Q9NVP4 752 aa4.22□□□□□ -1.73
SPC25-202ENST00000451987 KBTBD4Q9NVX7 518 aa4.22□□□□□ -1.73
SPC25-202ENST00000451987 SALL4Q9UJQ4 1053 aa4.22□□□□□ -1.73
SPC25-202ENST00000451987 TTF2Q9UNY4 1162 aaKnown RBP4.22□□□□□ -1.73
SPC25-202ENST00000451987 R3HCC1Q9Y3T6 440 aaKnown RBP4.22□□□□□ -1.73
SPC25-202ENST00000451987 PRKAB1Q9Y478 270 aa4.22□□□□□ -1.73
SPC25-202ENST00000451987 CEMIPQ8WUJ3 1361 aa4.22□□□□□ -1.73
SPC25-202ENST00000451987 STRCP1A6NGW2 1772 aa4.22□□□□□ -1.73
SPC25-202ENST00000451987 ABCC4O15439 1325 aa4.21□□□□□ -1.73
SPC25-202ENST00000451987 CRB1P82279 1406 aa4.21□□□□□ -1.73
SPC25-202ENST00000451987 NHSL1Q5SYE7 1610 aa4.21□□□□□ -1.73
SPC25-202ENST00000451987 PARP4Q9UKK3 1724 aaKnown RBP4.21□□□□□ -1.73
SPC25-202ENST00000451987 CRYBG1Q9Y4K1 1723 aa4.21□□□□□ -1.73
SPC25-202ENST00000451987 XIRP1Q702N8 1843 aaKnown RBP4.21□□□□□ -1.74
SPC25-202ENST00000451987 PPP1R12AO14974 1030 aaPredicted RBP4.21□□□□□ -1.74
SPC25-202ENST00000451987 PLIN1O60240 522 aa4.21□□□□□ -1.74
SPC25-202ENST00000451987 HMMRO75330 724 aa4.21□□□□□ -1.74
SPC25-202ENST00000451987 CTSBP07858 339 aa4.21□□□□□ -1.74
SPC25-202ENST00000451987 NFICP08651 508 aa4.21□□□□□ -1.74
SPC25-202ENST00000451987 CFPP27918 469 aa4.21□□□□□ -1.74
SPC25-202ENST00000451987 EIF4A3P38919 411 aaKnown RBP4.21□□□□□ -1.74
SPC25-202ENST00000451987 SOX9P48436 509 aa4.21□□□□□ -1.74
SPC25-202ENST00000451987 NASPP49321 788 aaPredicted RBP4.21□□□□□ -1.74
SPC25-202ENST00000451987 CCT4P50991 539 aaKnown RBP4.21□□□□□ -1.74
SPC25-202ENST00000451987 USP11P51784 963 aa4.21□□□□□ -1.74
SPC25-202ENST00000451987 PLEKHG4Q58EX7 1191 aa4.21□□□□□ -1.74
SPC25-202ENST00000451987 C1orf141Q5JVX7 400 aa4.21□□□□□ -1.74
SPC25-202ENST00000451987 INTS3Q68E01 1043 aaKnown RBP4.21□□□□□ -1.74
SPC25-202ENST00000451987 RPAP2Q8IXW5 612 aaPredicted RBP4.21□□□□□ -1.74
SPC25-202ENST00000451987 SMC5Q8IY18 1101 aa4.21□□□□□ -1.74
SPC25-202ENST00000451987 TMEM74Q96NL1 305 aa4.21□□□□□ -1.74
SPC25-202ENST00000451987 SRPK1Q96SB4 655 aaKnown RBP4.21□□□□□ -1.74
SPC25-202ENST00000451987 NT5C1AQ9BXI3 368 aa4.21□□□□□ -1.74
SPC25-202ENST00000451987 SLKQ9H2G2 1235 aaPredicted RBP4.21□□□□□ -1.74
SPC25-202ENST00000451987 ZFYVE1Q9HBF4 777 aa4.21□□□□□ -1.74
SPC25-202ENST00000451987 ZBTB40Q9NUA8 1239 aa4.21□□□□□ -1.74
SPC25-202ENST00000451987 LMCD1Q9NZU5 365 aa4.21□□□□□ -1.74
SPC25-202ENST00000451987 TSPYL4Q9UJ04 414 aa4.21□□□□□ -1.74
SPC25-202ENST00000451987 PPM1HQ9ULR3 514 aa4.21□□□□□ -1.74
SPC25-202ENST00000451987 ACTL7BQ9Y614 415 aa4.21□□□□□ -1.74
SPC25-202ENST00000451987 PXDNQ92626 1479 aa4.21□□□□□ -1.74
SPC25-202ENST00000451987 SPATA31A3Q5VYP0 1347 aa4.21□□□□□ -1.74
SPC25-202ENST00000451987 KDM3BQ7LBC6 1761 aa4.2□□□□□ -1.74
SPC25-202ENST00000451987 SCN11AQ9UI33 1791 aa4.2□□□□□ -1.74
SPC25-202ENST00000451987 PDE2AO00408 941 aaPredicted RBP4.2□□□□□ -1.74
SPC25-202ENST00000451987 CD8BP10966 210 aa4.2□□□□□ -1.74
SPC25-202ENST00000451987 RAB6AP20340 208 aa4.2□□□□□ -1.74
SPC25-202ENST00000451987 GBP2P32456 591 aaPredicted RBP4.2□□□□□ -1.74
SPC25-202ENST00000451987 CABP4P57796 275 aa4.2□□□□□ -1.74
SPC25-202ENST00000451987 SOX4Q06945 474 aaPredicted RBP4.2□□□□□ -1.74
SPC25-202ENST00000451987 TEFQ10587 303 aa4.2□□□□□ -1.74
SPC25-202ENST00000451987 RAB33AQ14088 237 aa4.2□□□□□ -1.74
SPC25-202ENST00000451987 GRM2Q14416 872 aa4.2□□□□□ -1.74
SPC25-202ENST00000451987 CCDC85BQ15834 202 aaPredicted RBP4.2□□□□□ -1.74
SPC25-202ENST00000451987 MTHFSDQ2M296 383 aaKnown RBP4.2□□□□□ -1.74
SPC25-202ENST00000451987 TAF7LQ5H9L4 462 aa4.2□□□□□ -1.74
SPC25-202ENST00000451987 CCDC181Q5TID7 509 aa4.2□□□□□ -1.74
SPC25-202ENST00000451987 KIAA0319Q5VV43 1072 aa4.2□□□□□ -1.74
SPC25-202ENST00000451987 ANKS3Q6ZW76 656 aa4.2□□□□□ -1.74
SPC25-202ENST00000451987 ITPRIPQ8IWB1 547 aa4.2□□□□□ -1.74
SPC25-202ENST00000451987 C1orf127Q8N9H9 656 aa4.2□□□□□ -1.74
SPC25-202ENST00000451987 LRRN4CLQ8ND94 238 aa4.2□□□□□ -1.74
SPC25-202ENST00000451987 RAPGEF4Q8WZA2 1011 aa4.2□□□□□ -1.74
SPC25-202ENST00000451987 TSR2Q969E8 191 aaKnown RBP4.2□□□□□ -1.74
SPC25-202ENST00000451987 RNPC3Q96LT9 517 aaKnown RBP4.2□□□□□ -1.74
SPC25-202ENST00000451987 TOX2Q96NM4 488 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms