RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 TBC1D2BQ9UPU7 963 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 KDRP35968 1356 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 MON2Q7Z3U7 1717 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 WDR17Q8IZU2 1322 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 GOLGA6L10A6NI86 522 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 GNAT1P11488 350 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 ATP4AP20648 1035 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 CUL4BQ13620 913 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 C8orf74Q6P047 294 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 MREGQ8N565 214 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 CCDC63Q8NA47 563 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 AGAP11Q8TF27 550 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 PIK3R5Q8WYR1 880 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 CNKSR1Q969H4 720 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 EPAS1Q99814 870 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 DSCC1Q9BVC3 393 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 NDST4Q9H3R1 872 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 SEC31BQ9NQW1 1179 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 ZFATQ9P243 1243 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 NDUFB9Q9Y6M9 179 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 SH3TC1Q8TE82 1336 aa9.55□□□□□ -0.88
LSM5-208ENST00000450169 A0A0G2JLW4 131 aa9.55□□□□□ -0.88
LSM5-208ENST00000450169 KLF18A0A0U1RQI7 1052 aa9.55□□□□□ -0.88
LSM5-208ENST00000450169 B4DLN1 442 aa9.55□□□□□ -0.88
LSM5-208ENST00000450169 SMIM24O75264 130 aa9.55□□□□□ -0.88
LSM5-208ENST00000450169 RANBP1P43487 201 aa9.55□□□□□ -0.88
LSM5-208ENST00000450169 CTCFP49711 727 aaPredicted RBP9.55□□□□□ -0.88
LSM5-208ENST00000450169 MTA1Q13330 715 aa9.55□□□□□ -0.88
LSM5-208ENST00000450169 KRT31Q15323 416 aa9.55□□□□□ -0.88
LSM5-208ENST00000450169 C1QTNF12Q5T7M4 302 aa9.55□□□□□ -0.88
LSM5-208ENST00000450169 KANK3Q6NY19 840 aa9.55□□□□□ -0.88
LSM5-208ENST00000450169 IFT20Q8IY31 132 aa9.55□□□□□ -0.88
LSM5-208ENST00000450169 SENP2Q9HC62 589 aa9.55□□□□□ -0.88
LSM5-208ENST00000450169 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.55□□□□□ -0.883e-6■■■■□ 22.3
LSM5-208ENST00000450169 SLC12A6Q9UHW9 1150 aa9.55□□□□□ -0.88
LSM5-208ENST00000450169 HPS5Q9UPZ3 1129 aa9.55□□□□□ -0.88
LSM5-208ENST00000450169 PRR36Q9H6K5 1346 aa9.55□□□□□ -0.88
LSM5-208ENST00000450169 MACROD2A1Z1Q3 448 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 FAM153BP0C7A2 387 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 SETSIPP0DME0 302 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 ATN1P54259 1190 aaPredicted RBP9.54□□□□□ -0.88
LSM5-208ENST00000450169 PAK2Q13177 524 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 FAM153CQ494X1 144 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 MAATS1Q7Z4T9 603 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 CCDC170Q8IYT3 715 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 GALNT15Q8N3T1 639 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 OSBPL1AQ9BXW6 950 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 TSGA10Q9BZW7 698 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 LACRTQ9GZZ8 138 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 VPS16Q9H269 839 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 CHPF2Q9P2E5 772 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 LIMA1Q9UHB6 759 aaKnown RBP9.54□□□□□ -0.88
LSM5-208ENST00000450169 FAM153AQ9UHL3 310 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 NFU1Q9UMS0 254 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 PEAK1Q9H792 1746 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 GNAT3A8MTJ3 354 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 ACTN4O43707 911 aaKnown RBP9.54□□□□□ -0.88
LSM5-208ENST00000450169 TRIM37O94972 964 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 GSTA1P08263 222 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 KRT40Q6A162 431 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 MTHFD1LQ6UB35 978 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 ARHGAP22Q7Z5H3 698 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 CPLX4Q7Z7G2 160 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 RAB11FIP4Q86YS3 637 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 FAM81AQ8TBF8 368 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 NOC3LQ8WTT2 800 aaKnown RBP9.54□□□□□ -0.88
LSM5-208ENST00000450169 ZFAND2BQ8WV99 257 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 AIFM3Q96NN9 605 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 PURBQ96QR8 312 aaKnown RBP9.54□□□□□ -0.88
LSM5-208ENST00000450169 PSMD1Q99460 953 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 DNAJC7Q99615 494 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 ALG1Q9BT22 464 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 BABAM1Q9NWV8 329 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 SLC12A4Q9UP95 1085 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 AKAP12Q02952 1782 aa9.54□□□□□ -0.88
LSM5-208ENST00000450169 MRC1P22897 1456 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.53□□□□□ -0.88
LSM5-208ENST00000450169 RCCD1A6NED2 376 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 CFAP73A6NFT4 308 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 LRRC10BA6NIK2 292 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 CCT8L1PA6NM43 557 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 BACH1O14867 736 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 CDKL5O76039 1030 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 IMPDH2P12268 514 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 ALADP13716 330 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 MAGEA8P43361 318 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 CARSP49589 748 aaKnown RBP9.53□□□□□ -0.88
LSM5-208ENST00000450169 ZNF268Q14587 947 aaPredicted RBP9.53□□□□□ -0.88
LSM5-208ENST00000450169 CDC37Q16543 378 aaPredicted RBP9.53□□□□□ -0.88
LSM5-208ENST00000450169 HHATQ5VTY9 493 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 DDX46Q7L014 1031 aaKnown RBP9.53□□□□□ -0.88
LSM5-208ENST00000450169 NCAPG2Q86XI2 1143 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 STK11IPQ8N1F8 1099 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 FAM167BQ9BTA0 163 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 TAF1DQ9H5J8 278 aaPredicted RBP9.53□□□□□ -0.88
LSM5-208ENST00000450169 TMBIM4Q9HC24 238 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 PANK4Q9NVE7 773 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 TAB2Q9NYJ8 693 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 G3BP2Q9UN86 482 aaKnown RBP9.53□□□□□ -0.88
LSM5-208ENST00000450169 PLAAQ9Y263 795 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms