RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 ZNF157P51786 506 aaPredicted RBP22.09■■□□□ 1.13
RPS28-202ENST00000449223 IRX3P78415 501 aaPredicted RBP22.09■■□□□ 1.13
RPS28-202ENST00000449223 CCL15Q16663 113 aa22.09■■□□□ 1.13
RPS28-202ENST00000449223 USH1GQ495M9 461 aa22.09■■□□□ 1.13
RPS28-202ENST00000449223 FAM173BQ6P4H8 233 aa22.09■■□□□ 1.13
RPS28-202ENST00000449223 CCDC174Q6PII3 467 aa22.09■■□□□ 1.13
RPS28-202ENST00000449223 REXO1Q8N1G1 1221 aaKnown RBP22.09■■□□□ 1.13
RPS28-202ENST00000449223 BRI3BPQ8WY22 251 aa22.09■■□□□ 1.13
RPS28-202ENST00000449223 PCDHA6Q9UN73 950 aa22.09■■□□□ 1.13
RPS28-202ENST00000449223 MRPL11Q9Y3B7 192 aaKnown RBP22.09■■□□□ 1.13
RPS28-202ENST00000449223 PCDHA8Q9Y5H6 950 aa22.09■■□□□ 1.13
RPS28-202ENST00000449223 KRT85P78386 507 aa22.08■■□□□ 1.13
RPS28-202ENST00000449223 DNM1Q05193 864 aaKnown RBP22.08■■□□□ 1.13
RPS28-202ENST00000449223 RILPL1Q5EBL4 403 aa22.08■■□□□ 1.13
RPS28-202ENST00000449223 MCTP2Q6DN12 878 aa22.08■■□□□ 1.13
RPS28-202ENST00000449223 GTF3C2Q8WUA4 911 aaPredicted RBP22.08■■□□□ 1.13
RPS28-202ENST00000449223 MAF1Q9H063 256 aa22.08■■□□□ 1.13
RPS28-202ENST00000449223 PNMA3Q9UL41 463 aa22.08■■□□□ 1.13
RPS28-202ENST00000449223 CCPG1Q9ULG6 757 aa22.08■■□□□ 1.13
RPS28-202ENST00000449223 MEIS2O14770 477 aa22.07■■□□□ 1.12
RPS28-202ENST00000449223 OSBPP22059 807 aa22.07■■□□□ 1.12
RPS28-202ENST00000449223 TRAPPC10P48553 1259 aa22.07■■□□□ 1.12
RPS28-202ENST00000449223 HERVK_113P62684 666 aa22.07■■□□□ 1.12
RPS28-202ENST00000449223 TMEM132BQ14DG7 1078 aa22.07■■□□□ 1.12
RPS28-202ENST00000449223 POTEEQ6S8J3 1075 aa22.07■■□□□ 1.12
RPS28-202ENST00000449223 SAMD3Q8N6K7 520 aa22.07■■□□□ 1.12
RPS28-202ENST00000449223 CCDC102AQ96A19 550 aa22.07■■□□□ 1.12
RPS28-202ENST00000449223 AGBL1Q96MI9 1066 aa22.07■■□□□ 1.12
RPS28-202ENST00000449223 ZNF396Q96N95 335 aaPredicted RBP22.07■■□□□ 1.12
RPS28-202ENST00000449223 P2RX7Q99572 595 aaKnown RBP22.07■■□□□ 1.12
RPS28-202ENST00000449223 ZCCHC17Q9NP64 241 aaKnown RBP22.07■■□□□ 1.12
RPS28-202ENST00000449223 CFAP45Q9UL16 551 aa22.07■■□□□ 1.12
RPS28-202ENST00000449223 MANSC4A6NHS7 340 aaPredicted RBP22.06■■□□□ 1.12
RPS28-202ENST00000449223 EARS2Q5JPH6 523 aaKnown RBP22.06■■□□□ 1.12
RPS28-202ENST00000449223 SAMD1Q6SPF0 538 aaPredicted RBP22.06■■□□□ 1.12
RPS28-202ENST00000449223 KRT25Q7Z3Z0 450 aa22.06■■□□□ 1.12
RPS28-202ENST00000449223 TEX13BQ9BXU2 312 aa22.06■■□□□ 1.12
RPS28-202ENST00000449223 RAVER2Q9HCJ3 691 aaKnown RBP22.06■■□□□ 1.12
RPS28-202ENST00000449223 POLR3EQ9NVU0 708 aa22.06■■□□□ 1.12
RPS28-202ENST00000449223 FAM155AB1AL88 458 aaPredicted RBP22.06■■□□□ 1.12
RPS28-202ENST00000449223 BTBD19C9JJ37 291 aa22.06■■□□□ 1.12
RPS28-202ENST00000449223 AP3B2Q13367 1082 aa22.06■■□□□ 1.12
RPS28-202ENST00000449223 TKFCQ3LXA3 575 aa22.06■■□□□ 1.12
RPS28-202ENST00000449223 TMEM87AQ8NBN3 555 aa22.06■■□□□ 1.12
RPS28-202ENST00000449223 CHAMP1Q96JM3 812 aa22.06■■□□□ 1.12
RPS28-202ENST00000449223 MAP3K20Q9NYL2 800 aaKnown RBP22.06■■□□□ 1.12
RPS28-202ENST00000449223 CTDP1Q9Y5B0 961 aaPredicted RBP22.06■■□□□ 1.12
RPS28-202ENST00000449223 NASPP49321 788 aaPredicted RBP22.05■■□□□ 1.12
RPS28-202ENST00000449223 TOB1P50616 345 aaPredicted RBP22.05■■□□□ 1.12
RPS28-202ENST00000449223 INHBEP58166 350 aa22.05■■□□□ 1.12
RPS28-202ENST00000449223 CLEC4DQ8WXI8 215 aa22.05■■□□□ 1.12
RPS28-202ENST00000449223 SCAND2PQ9GZW5 306 aaPredicted RBP22.05■■□□□ 1.12
RPS28-202ENST00000449223 RTEL1Q9NZ71 1219 aa22.05■■□□□ 1.12
RPS28-202ENST00000449223 CCDC194A0A1B0GVG4 234 aa22.04■■□□□ 1.12
RPS28-202ENST00000449223 MCM4P33991 863 aa22.04■■□□□ 1.12
RPS28-202ENST00000449223 FOXD4L6Q3SYB3 417 aaPredicted RBP22.04■■□□□ 1.12
RPS28-202ENST00000449223 FOXD4L3Q6VB84 417 aaPredicted RBP22.04■■□□□ 1.12
RPS28-202ENST00000449223 PIK3AP1Q6ZUJ8 805 aa22.04■■□□□ 1.12
RPS28-202ENST00000449223 CPXCR1Q8N123 301 aa22.04■■□□□ 1.12
RPS28-202ENST00000449223 RASGRP4Q8TDF6 673 aa22.04■■□□□ 1.12
RPS28-202ENST00000449223 USP28Q96RU2 1077 aa22.04■■□□□ 1.12
RPS28-202ENST00000449223 PTPN18Q99952 460 aa22.04■■□□□ 1.12
RPS28-202ENST00000449223 ABT1Q9ULW3 272 aaKnown RBP22.04■■□□□ 1.12
RPS28-202ENST00000449223 MORC2Q9Y6X9 1032 aaPredicted RBP22.04■■□□□ 1.12
RPS28-202ENST00000449223 ELP1O95163 1332 aa22.04■■□□□ 1.12
RPS28-202ENST00000449223 PDHXO00330 501 aa22.03■■□□□ 1.12
RPS28-202ENST00000449223 FOSP01100 380 aaPredicted RBP22.03■■□□□ 1.12
RPS28-202ENST00000449223 TAL1P17542 331 aaPredicted RBP22.03■■□□□ 1.12
RPS28-202ENST00000449223 STAT3P40763 770 aa22.03■■□□□ 1.12
RPS28-202ENST00000449223 HSD17B4P51659 736 aa22.03■■□□□ 1.12
RPS28-202ENST00000449223 MKRN3Q13064 507 aaKnown RBP22.03■■□□□ 1.12
RPS28-202ENST00000449223 NONOQ15233 471 aaKnown RBP eCLIP22.03■■□□□ 1.12
RPS28-202ENST00000449223 NOM1Q5C9Z4 860 aaKnown RBP22.03■■□□□ 1.12
RPS28-202ENST00000449223 SNRNP48Q6IEG0 339 aaKnown RBP22.03■■□□□ 1.12
RPS28-202ENST00000449223 MCF2L2Q86YR7 1114 aa22.03■■□□□ 1.12
RPS28-202ENST00000449223 CREBZFQ9NS37 354 aa22.03■■□□□ 1.12
RPS28-202ENST00000449223 BIN2Q9UBW5 565 aaPredicted RBP22.03■■□□□ 1.12
RPS28-202ENST00000449223 NOL7Q9UMY1 257 aaKnown RBP22.03■■□□□ 1.12
RPS28-202ENST00000449223 CNPY2Q9Y2B0 182 aa22.03■■□□□ 1.12
RPS28-202ENST00000449223 RABGAP1Q9Y3P9 1069 aa22.03■■□□□ 1.12
RPS28-202ENST00000449223 FAM205CA6NFA0 338 aa22.02■■□□□ 1.12
RPS28-202ENST00000449223 CNMDO75829 334 aa22.02■■□□□ 1.12
RPS28-202ENST00000449223 YEATS4O95619 227 aa22.02■■□□□ 1.12
RPS28-202ENST00000449223 APLP1P51693 650 aa22.02■■□□□ 1.12
RPS28-202ENST00000449223 USP17L6PQ6QN14 398 aa22.02■■□□□ 1.12
RPS28-202ENST00000449223 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.02■■□□□ 1.12
RPS28-202ENST00000449223 RIOX2Q8IUF8 465 aa22.02■■□□□ 1.12
RPS28-202ENST00000449223 FAM43AQ8N2R8 423 aa22.02■■□□□ 1.12
RPS28-202ENST00000449223 BTBD7Q9P203 1132 aa22.02■■□□□ 1.12
RPS28-202ENST00000449223 MYH7BA7E2Y1 1941 aa22.02■■□□□ 1.12
RPS28-202ENST00000449223 RASSF10A6NK89 507 aa22.01■■□□□ 1.11
RPS28-202ENST00000449223 GOLGA6L22H0YM25 854 aa22.01■■□□□ 1.11
RPS28-202ENST00000449223 ALAS1P13196 640 aa22.01■■□□□ 1.11
RPS28-202ENST00000449223 UBE2SQ16763 222 aa22.01■■□□□ 1.11
RPS28-202ENST00000449223 CSPP1Q1MSJ5 1256 aa22.01■■□□□ 1.11
RPS28-202ENST00000449223 ANO1Q5XXA6 986 aa22.01■■□□□ 1.11
RPS28-202ENST00000449223 TRERF1Q96PN7 1200 aa22.01■■□□□ 1.11
RPS28-202ENST00000449223 SPATC1LQ9H0A9 340 aa22.01■■□□□ 1.11
RPS28-202ENST00000449223 RBPJLQ9UBG7 517 aa22.01■■□□□ 1.11
RPS28-202ENST00000449223 RCOR1Q9UKL0 485 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms