RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 PRPHP41219 470 aa12.01□□□□□ -0.49
VIPAS39-203ENST00000448935 PTGER2P43116 358 aa12.01□□□□□ -0.49
VIPAS39-203ENST00000448935 TPM4P67936 248 aa12.01□□□□□ -0.49
VIPAS39-203ENST00000448935 TRAF1Q13077 416 aa12.01□□□□□ -0.49
VIPAS39-203ENST00000448935 LONRF3Q496Y0 759 aa12.01□□□□□ -0.49
VIPAS39-203ENST00000448935 MCTP2Q6DN12 878 aa12.01□□□□□ -0.49
VIPAS39-203ENST00000448935 RASGRP2Q7LDG7 609 aa12.01□□□□□ -0.49
VIPAS39-203ENST00000448935 LUZP1Q86V48 1076 aa12.01□□□□□ -0.49
VIPAS39-203ENST00000448935 CLEC10AQ8IUN9 316 aa12.01□□□□□ -0.49
VIPAS39-203ENST00000448935 MTMR8Q96EF0 704 aa12.01□□□□□ -0.49
VIPAS39-203ENST00000448935 ZBED3Q96IU2 234 aaPredicted RBP12.01□□□□□ -0.49
VIPAS39-203ENST00000448935 CPVLQ9H3G5 476 aa12.01□□□□□ -0.49
VIPAS39-203ENST00000448935 JMJD4Q9H9V9 463 aa12.01□□□□□ -0.49
VIPAS39-203ENST00000448935 VEZTQ9HBM0 779 aa12.01□□□□□ -0.49
VIPAS39-203ENST00000448935 MYOZ2Q9NPC6 264 aa12.01□□□□□ -0.49
VIPAS39-203ENST00000448935 GOLGA6L6A8MZA4 724 aa12□□□□□ -0.49
VIPAS39-203ENST00000448935 GDF11O95390 407 aa12□□□□□ -0.49
VIPAS39-203ENST00000448935 GH2P01242 217 aa12□□□□□ -0.49
VIPAS39-203ENST00000448935 MRPL12P52815 198 aaKnown RBP12□□□□□ -0.49
VIPAS39-203ENST00000448935 CNTNAP1P78357 1384 aa12□□□□□ -0.49
VIPAS39-203ENST00000448935 NEK8Q86SG6 692 aa12□□□□□ -0.49
VIPAS39-203ENST00000448935 DPF2Q92785 391 aa12□□□□□ -0.49
VIPAS39-203ENST00000448935 NAP1L4Q99733 375 aaKnown RBP12□□□□□ -0.49
VIPAS39-203ENST00000448935 TMEM121BQ9BXQ6 578 aaPredicted RBP12□□□□□ -0.49
VIPAS39-203ENST00000448935 SH2D4AQ9H788 454 aa12□□□□□ -0.49
VIPAS39-203ENST00000448935 VWA3AA6NCI4 1184 aa12□□□□□ -0.49
VIPAS39-203ENST00000448935 SMTNL1A8MU46 457 aa12□□□□□ -0.49
VIPAS39-203ENST00000448935 F5H6K3 240 aa12□□□□□ -0.49
VIPAS39-203ENST00000448935 RAD21O60216 631 aa12□□□□□ -0.49
VIPAS39-203ENST00000448935 SMC2O95347 1197 aa12□□□□□ -0.49
VIPAS39-203ENST00000448935 TPM3P06753 285 aa12□□□□□ -0.49
VIPAS39-203ENST00000448935 ZNF280AP59817 542 aaPredicted RBP12□□□□□ -0.49
VIPAS39-203ENST00000448935 GRIN1Q05586 938 aa12□□□□□ -0.49
VIPAS39-203ENST00000448935 KLRC3Q07444 240 aa12□□□□□ -0.49
VIPAS39-203ENST00000448935 IQCB1Q15051 598 aa12□□□□□ -0.49
VIPAS39-203ENST00000448935 POSTNQ15063 836 aa12□□□□□ -0.49
VIPAS39-203ENST00000448935 INF2Q27J81 1249 aa12□□□□□ -0.49
VIPAS39-203ENST00000448935 NOM1Q5C9Z4 860 aaKnown RBP12□□□□□ -0.49
VIPAS39-203ENST00000448935 SPECC1Q5M775 1068 aa12□□□□□ -0.49
VIPAS39-203ENST00000448935 DTHD1Q6ZMT9 781 aa12□□□□□ -0.49
VIPAS39-203ENST00000448935 C11orf57Q6ZUT1 292 aaPredicted RBP12□□□□□ -0.49
VIPAS39-203ENST00000448935 TRIML1Q8N9V2 468 aa12□□□□□ -0.49
VIPAS39-203ENST00000448935 IQUBQ8NA54 791 aa12□□□□□ -0.49
VIPAS39-203ENST00000448935 RASGRP4Q8TDF6 673 aa12□□□□□ -0.49
VIPAS39-203ENST00000448935 DDX12PQ92771 950 aa12□□□□□ -0.49
VIPAS39-203ENST00000448935 CUL5Q93034 780 aa12□□□□□ -0.49
VIPAS39-203ENST00000448935 RIC8AQ9NPQ8 531 aa12□□□□□ -0.49
VIPAS39-203ENST00000448935 DACH1Q9UI36 760 aa12□□□□□ -0.49
VIPAS39-203ENST00000448935 ESPNB1AK53 854 aa11.99□□□□□ -0.49
VIPAS39-203ENST00000448935 WNT10BO00744 389 aa11.99□□□□□ -0.49
VIPAS39-203ENST00000448935 SLFN14P0C7P3 912 aa11.99□□□□□ -0.49
VIPAS39-203ENST00000448935 BMP3P12645 472 aa11.99□□□□□ -0.49
VIPAS39-203ENST00000448935 KCTD1Q719H9 257 aa11.99□□□□□ -0.49
VIPAS39-203ENST00000448935 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.99□□□□□ -0.49
VIPAS39-203ENST00000448935 TEX2Q8IWB9 1127 aa11.99□□□□□ -0.49
VIPAS39-203ENST00000448935 SYMPKQ92797 1274 aaKnown RBP11.99□□□□□ -0.49
VIPAS39-203ENST00000448935 SMARCE1Q969G3 411 aa11.99□□□□□ -0.49
VIPAS39-203ENST00000448935 GINM1Q9NU53 330 aa11.99□□□□□ -0.49
VIPAS39-203ENST00000448935 SERTAD1Q9UHV2 236 aa11.99□□□□□ -0.49
VIPAS39-203ENST00000448935 BOLA1Q9Y3E2 137 aa11.99□□□□□ -0.49
VIPAS39-203ENST00000448935 WNT7AO00755 349 aa11.98□□□□□ -0.49
VIPAS39-203ENST00000448935 ACTN4O43707 911 aaKnown RBP11.98□□□□□ -0.49
VIPAS39-203ENST00000448935 NDUFB10O96000 172 aa11.98□□□□□ -0.49
VIPAS39-203ENST00000448935 MDM2Q00987 491 aaPredicted RBP11.98□□□□□ -0.49
VIPAS39-203ENST00000448935 MAP3K10Q02779 954 aa11.98□□□□□ -0.49
VIPAS39-203ENST00000448935 PNOCQ13519 176 aa11.98□□□□□ -0.49
VIPAS39-203ENST00000448935 NT5DC1Q5TFE4 455 aa11.98□□□□□ -0.49
VIPAS39-203ENST00000448935 TTBK2Q6IQ55 1244 aa11.98□□□□□ -0.49
VIPAS39-203ENST00000448935 SARM1Q6SZW1 724 aa11.98□□□□□ -0.49
VIPAS39-203ENST00000448935 ZSCAN30Q86W11 494 aa11.98□□□□□ -0.49
VIPAS39-203ENST00000448935 SIAH1Q8IUQ4 282 aa11.98□□□□□ -0.49
VIPAS39-203ENST00000448935 C4orf32Q8N8J7 132 aa11.98□□□□□ -0.49
VIPAS39-203ENST00000448935 COA7Q96BR5 231 aa11.98□□□□□ -0.49
VIPAS39-203ENST00000448935 AK8Q96MA6 479 aa11.98□□□□□ -0.49
VIPAS39-203ENST00000448935 PCMTD1Q96MG8 357 aaPredicted RBP11.98□□□□□ -0.49
VIPAS39-203ENST00000448935 USP17L10C9JJH3 530 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 FZD9O00144 591 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 IKBKBO14920 756 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 NEMFO60524 1076 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 CCNT1O60563 726 aaKnown RBP11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 OR52Z1P0C646 297 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 SLURP2P0DP57 97 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 MSNP26038 577 aaKnown RBP11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 SLC16A2P36021 539 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 IKQ13123 557 aaPredicted RBP11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 LETM2Q2VYF4 491 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 DPCR1Q3MIW9 517 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 CT47A1Q5JQC4 288 aaPredicted RBP11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 BTNL9Q6UXG8 535 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 PDILTQ8N807 584 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 TBCKQ8TEA7 893 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 ERCC4Q92889 916 aaPredicted RBP11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 DHX58Q96C10 678 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 EPSTI1Q96J88 318 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 TRIM5Q9C035 493 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 BIN2Q9UBW5 565 aaPredicted RBP11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 ZBTB21Q9ULJ3 1066 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 TMX2Q9Y320 296 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 PCDHA5Q9Y5H7 936 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 A6NJR5 290 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms