RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 KIF28PB7ZC32 967 aa22.41■■□□□ 1.18
SGCE-207ENST00000447873 MRPL12P52815 198 aaKnown RBP22.41■■□□□ 1.18
SGCE-207ENST00000447873 GRM1Q13255 1194 aa22.41■■□□□ 1.18
SGCE-207ENST00000447873 NR5A1Q13285 461 aa22.41■■□□□ 1.18
SGCE-207ENST00000447873 TMEM132BQ14DG7 1078 aa22.41■■□□□ 1.18
SGCE-207ENST00000447873 LBX2Q6XYB7 198 aa22.41■■□□□ 1.18
SGCE-207ENST00000447873 CUL5Q93034 780 aa22.41■■□□□ 1.18
SGCE-207ENST00000447873 PTPN18Q99952 460 aa22.41■■□□□ 1.18
SGCE-207ENST00000447873 GLT8D2Q9H1C3 349 aa22.41■■□□□ 1.18
SGCE-207ENST00000447873 RIC8AQ9NPQ8 531 aa22.41■■□□□ 1.18
SGCE-207ENST00000447873 A0A0G2JMZ2 1700 aa22.4■■□□□ 1.18
SGCE-207ENST00000447873 ALAS1P13196 640 aa22.4■■□□□ 1.18
SGCE-207ENST00000447873 PLS1Q14651 629 aa22.4■■□□□ 1.18
SGCE-207ENST00000447873 FOXD4L6Q3SYB3 417 aaPredicted RBP22.4■■□□□ 1.18
SGCE-207ENST00000447873 FOXD4L3Q6VB84 417 aaPredicted RBP22.4■■□□□ 1.18
SGCE-207ENST00000447873 BRAPQ7Z569 592 aa22.4■■□□□ 1.18
SGCE-207ENST00000447873 NOSTRINQ8IVI9 506 aa22.4■■□□□ 1.18
SGCE-207ENST00000447873 FAM43AQ8N2R8 423 aa22.4■■□□□ 1.18
SGCE-207ENST00000447873 ZNF214Q9UL59 606 aaPredicted RBP22.4■■□□□ 1.18
SGCE-207ENST00000447873 ATP2A1O14983 1001 aa22.39■■□□□ 1.18
SGCE-207ENST00000447873 CYP2C8P10632 490 aa22.39■■□□□ 1.18
SGCE-207ENST00000447873 INHBEP58166 350 aa22.39■■□□□ 1.18
SGCE-207ENST00000447873 DEFB115Q30KQ5 88 aa22.39■■□□□ 1.18
SGCE-207ENST00000447873 SNRNP48Q6IEG0 339 aaKnown RBP22.39■■□□□ 1.18
SGCE-207ENST00000447873 CYP4F22Q6NT55 531 aa22.39■■□□□ 1.18
SGCE-207ENST00000447873 REXO1Q8N1G1 1221 aaKnown RBP22.39■■□□□ 1.18
SGCE-207ENST00000447873 TEX13BQ9BXU2 312 aa22.39■■□□□ 1.18
SGCE-207ENST00000447873 MYH15Q9Y2K3 1946 aa22.39■■□□□ 1.17
SGCE-207ENST00000447873 SMCR8Q8TEV9 937 aaPredicted RBP22.38■■□□□ 1.17
SGCE-207ENST00000447873 GTF3C2Q8WUA4 911 aaPredicted RBP22.38■■□□□ 1.17
SGCE-207ENST00000447873 HOMER2Q9NSB8 354 aa22.38■■□□□ 1.17
SGCE-207ENST00000447873 RASSF10A6NK89 507 aa22.38■■□□□ 1.17
SGCE-207ENST00000447873 ADAMTS3O15072 1205 aa22.38■■□□□ 1.17
SGCE-207ENST00000447873 STAT3P40763 770 aa22.38■■□□□ 1.17
SGCE-207ENST00000447873 SREBF2Q12772 1141 aa22.38■■□□□ 1.17
SGCE-207ENST00000447873 FAM173BQ6P4H8 233 aa22.38■■□□□ 1.17
SGCE-207ENST00000447873 PARK7Q99497 189 aaKnown RBP22.38■■□□□ 1.17
SGCE-207ENST00000447873 PAGR1Q9BTK6 254 aa22.38■■□□□ 1.17
SGCE-207ENST00000447873 BTBD7Q9P203 1132 aa22.38■■□□□ 1.17
SGCE-207ENST00000447873 BIN2Q9UBW5 565 aaPredicted RBP22.38■■□□□ 1.17
SGCE-207ENST00000447873 PCDHA6Q9UN73 950 aa22.38■■□□□ 1.17
SGCE-207ENST00000447873 PCDHA8Q9Y5H6 950 aa22.38■■□□□ 1.17
SGCE-207ENST00000447873 M0R2N6 131 aa22.37■■□□□ 1.17
SGCE-207ENST00000447873 POTEEQ6S8J3 1075 aa22.37■■□□□ 1.17
SGCE-207ENST00000447873 RASGRP4Q8TDF6 673 aa22.37■■□□□ 1.17
SGCE-207ENST00000447873 TNFRSF25Q93038 417 aa22.37■■□□□ 1.17
SGCE-207ENST00000447873 TRERF1Q96PN7 1200 aa22.37■■□□□ 1.17
SGCE-207ENST00000447873 CCDC194A0A1B0GVG4 234 aa22.36■■□□□ 1.17
SGCE-207ENST00000447873 ZCCHC17Q9NP64 241 aaKnown RBP22.36■■□□□ 1.17
SGCE-207ENST00000447873 RBPJLQ9UBG7 517 aa22.36■■□□□ 1.17
SGCE-207ENST00000447873 RABGAP1Q9Y3P9 1069 aa22.36■■□□□ 1.17
SGCE-207ENST00000447873 RIPK3Q9Y572 518 aa22.36■■□□□ 1.17
SGCE-207ENST00000447873 TCHHQ07283 1943 aa22.35■■□□□ 1.17
SGCE-207ENST00000447873 IGF2BP3O00425 579 aaKnown RBP eCLIP22.35■■□□□ 1.17
SGCE-207ENST00000447873 OPLAHO14841 1288 aa22.35■■□□□ 1.17
SGCE-207ENST00000447873 CFBP00751 764 aa22.35■■□□□ 1.17
SGCE-207ENST00000447873 NOGQ13253 232 aa22.35■■□□□ 1.17
SGCE-207ENST00000447873 UBE2SQ16763 222 aa22.35■■□□□ 1.17
SGCE-207ENST00000447873 TKFCQ3LXA3 575 aa22.35■■□□□ 1.17
SGCE-207ENST00000447873 MYSM1Q5VVJ2 828 aa22.35■■□□□ 1.17
SGCE-207ENST00000447873 JAKMIP3Q5VZ66 844 aa22.35■■□□□ 1.17
SGCE-207ENST00000447873 USP17L6PQ6QN14 398 aa22.35■■□□□ 1.17
SGCE-207ENST00000447873 PIK3AP1Q6ZUJ8 805 aa22.35■■□□□ 1.17
SGCE-207ENST00000447873 MCF2L2Q86YR7 1114 aa22.35■■□□□ 1.17
SGCE-207ENST00000447873 IFNL1Q8IU54 200 aa22.35■■□□□ 1.17
SGCE-207ENST00000447873 TEX2Q8IWB9 1127 aa22.35■■□□□ 1.17
SGCE-207ENST00000447873 CAPNS2Q96L46 248 aa22.35■■□□□ 1.17
SGCE-207ENST00000447873 SPATC1LQ9H0A9 340 aa22.35■■□□□ 1.17
SGCE-207ENST00000447873 RNF146Q9NTX7 359 aa22.35■■□□□ 1.17
SGCE-207ENST00000447873 MEIS2O14770 477 aa22.34■■□□□ 1.17
SGCE-207ENST00000447873 PEX10O60683 326 aa22.34■■□□□ 1.17
SGCE-207ENST00000447873 DNM1Q05193 864 aaKnown RBP22.34■■□□□ 1.17
SGCE-207ENST00000447873 KRT25Q7Z3Z0 450 aa22.34■■□□□ 1.17
SGCE-207ENST00000447873 CLEC4DQ8WXI8 215 aa22.34■■□□□ 1.17
SGCE-207ENST00000447873 GBP4Q96PP9 640 aa22.34■■□□□ 1.17
SGCE-207ENST00000447873 TMEM260Q9NX78 707 aa22.34■■□□□ 1.17
SGCE-207ENST00000447873 RBBP6Q7Z6E9 1792 aaKnown RBP22.34■■□□□ 1.17
SGCE-207ENST00000447873 GCOM1H8Y6P7 765 aaPredicted RBP22.33■■□□□ 1.17
SGCE-207ENST00000447873 PIK3CDO00329 1044 aa22.33■■□□□ 1.17
SGCE-207ENST00000447873 NFIBO00712 420 aa22.33■■□□□ 1.17
SGCE-207ENST00000447873 CNMDO75829 334 aa22.33■■□□□ 1.17
SGCE-207ENST00000447873 BAG4O95429 457 aaKnown RBP22.33■■□□□ 1.17
SGCE-207ENST00000447873 POLR2MP0CAP2 368 aa22.33■■□□□ 1.17
SGCE-207ENST00000447873 GCLCP48506 637 aaPredicted RBP22.33■■□□□ 1.17
SGCE-207ENST00000447873 CLK2P49760 499 aaKnown RBP22.33■■□□□ 1.17
SGCE-207ENST00000447873 NOM1Q5C9Z4 860 aaKnown RBP22.33■■□□□ 1.17
SGCE-207ENST00000447873 MUM1L1Q5H9M0 696 aa22.33■■□□□ 1.17
SGCE-207ENST00000447873 EARS2Q5JPH6 523 aaKnown RBP22.33■■□□□ 1.17
SGCE-207ENST00000447873 CHAMP1Q96JM3 812 aa22.33■■□□□ 1.17
SGCE-207ENST00000447873 ZNF396Q96N95 335 aaPredicted RBP22.33■■□□□ 1.17
SGCE-207ENST00000447873 TXNRD2Q9NNW7 524 aa22.33■■□□□ 1.17
SGCE-207ENST00000447873 FAM205CA6NFA0 338 aa22.33■■□□□ 1.16
SGCE-207ENST00000447873 NCLP19338 710 aaKnown RBP22.33■■□□□ 1.16
SGCE-207ENST00000447873 HOXA13P31271 388 aaPredicted RBP22.33■■□□□ 1.16
SGCE-207ENST00000447873 RILPL1Q5EBL4 403 aa22.33■■□□□ 1.16
SGCE-207ENST00000447873 MCTP2Q6DN12 878 aa22.33■■□□□ 1.16
SGCE-207ENST00000447873 RIOX2Q8IUF8 465 aa22.33■■□□□ 1.16
SGCE-207ENST00000447873 TBC1D5Q92609 795 aa22.33■■□□□ 1.16
SGCE-207ENST00000447873 ZIC5Q96T25 663 aa22.33■■□□□ 1.16
SGCE-207ENST00000447873 ACAD9Q9H845 621 aa22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms