RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	KAT14	Q9H8E8	782 aa		13.99	□□□□□ -0.17
DDR1-238	ENST00000446312		H0YHG0	523 aa		13.98	□□□□□ -0.17
DDR1-238	ENST00000446312	FGFR2	P21802	821 aa		13.98	□□□□□ -0.17
DDR1-238	ENST00000446312	PBX1	P40424	430 aa		13.98	□□□□□ -0.17
DDR1-238	ENST00000446312	SSR1	P43307	286 aa	Known RBP	13.98	□□□□□ -0.17
DDR1-238	ENST00000446312	SARNP	P82979	210 aa	Known RBP	13.98	□□□□□ -0.17
DDR1-238	ENST00000446312	ANKRD40	Q6AI12	368 aa		13.98	□□□□□ -0.17
DDR1-238	ENST00000446312	TMTC3	Q6ZXV5	915 aa		13.98	□□□□□ -0.17
DDR1-238	ENST00000446312	TRIML1	Q8N9V2	468 aa		13.98	□□□□□ -0.17
DDR1-238	ENST00000446312	ZNF384	Q8TF68	577 aa		13.98	□□□□□ -0.17
DDR1-238	ENST00000446312	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
DDR1-238	ENST00000446312	ARFGEF2	Q9Y6D5	1785 aa		13.98	□□□□□ -0.17
DDR1-238	ENST00000446312	PLCG1	P19174	1290 aa		13.98	□□□□□ -0.17
DDR1-238	ENST00000446312	PDCL	Q13371	301 aa		13.98	□□□□□ -0.17
DDR1-238	ENST00000446312	PDXDC2P	Q6P474	469 aa		13.98	□□□□□ -0.17
DDR1-238	ENST00000446312	MAPKAPK5	Q8IW41	473 aa		13.98	□□□□□ -0.17
DDR1-238	ENST00000446312	NELFCD	Q8IXH7	590 aa		13.98	□□□□□ -0.17
DDR1-238	ENST00000446312	CNOT6L	Q96LI5	555 aa	Known RBP	13.98	□□□□□ -0.17
DDR1-238	ENST00000446312	TMEM260	Q9NX78	707 aa		13.98	□□□□□ -0.17
DDR1-238	ENST00000446312	KCNQ2	O43526	872 aa		13.98	□□□□□ -0.17
DDR1-238	ENST00000446312	SYF2	O95926	243 aa	Known RBP	13.98	□□□□□ -0.17
DDR1-238	ENST00000446312	FTCD	O95954	541 aa		13.98	□□□□□ -0.17
DDR1-238	ENST00000446312	RASSF7	Q02833	373 aa		13.98	□□□□□ -0.17
DDR1-238	ENST00000446312	FBXW10	Q5XX13	1052 aa		13.98	□□□□□ -0.17
DDR1-238	ENST00000446312	MCTP2	Q6DN12	878 aa		13.98	□□□□□ -0.17
DDR1-238	ENST00000446312	GTPBP6	O43824	516 aa	Predicted RBP	13.97	□□□□□ -0.17
DDR1-238	ENST00000446312	HPD	P32754	393 aa	Predicted RBP	13.97	□□□□□ -0.17
DDR1-238	ENST00000446312	MAGEA9	P43362	315 aa		13.97	□□□□□ -0.17
DDR1-238	ENST00000446312	CCDC152	Q4G0S7	254 aa		13.97	□□□□□ -0.17
DDR1-238	ENST00000446312	USP17L2	Q6R6M4	530 aa		13.97	□□□□□ -0.17
DDR1-238	ENST00000446312	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.97	□□□□□ -0.17
DDR1-238	ENST00000446312	GOLGA6C	A6NDK9	693 aa		13.97	□□□□□ -0.17
DDR1-238	ENST00000446312	KRT14	P02533	472 aa		13.97	□□□□□ -0.17
DDR1-238	ENST00000446312	GOLGA6D	P0CG33	693 aa		13.97	□□□□□ -0.17
DDR1-238	ENST00000446312	MECOM	Q03112	1051 aa		13.97	□□□□□ -0.17
DDR1-238	ENST00000446312	TXNRD1	Q16881	649 aa		13.97	□□□□□ -0.17
DDR1-238	ENST00000446312	CADPS2	Q86UW7	1296 aa		13.97	□□□□□ -0.17
DDR1-238	ENST00000446312	TMTC2	Q8N394	836 aa		13.97	□□□□□ -0.17
DDR1-238	ENST00000446312	ARL8A	Q96BM9	186 aa		13.97	□□□□□ -0.17
DDR1-238	ENST00000446312	GOLGA6A	Q9NYA3	693 aa		13.97	□□□□□ -0.17
DDR1-238	ENST00000446312	MYH10	P35580	1976 aa		13.97	□□□□□ -0.17
DDR1-238	ENST00000446312	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.97	□□□□□ -0.17
DDR1-238	ENST00000446312	STK36	Q9NRP7	1315 aa		13.97	□□□□□ -0.17
DDR1-238	ENST00000446312	GOLGA6B	A6NDN3	693 aa		13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	MARCH6	O60337	910 aa		13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	CRKL	P46109	303 aa	Known RBP	13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	USP14	P54578	494 aa		13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	GNGT1	P63211	74 aa		13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	ATP2C1	P98194	919 aa	Predicted RBP	13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	GFPT1	Q06210	699 aa	Predicted RBP	13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	FUT2	Q10981	343 aa		13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	KIF5A	Q12840	1032 aa		13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	WHAMMP3	Q1A5X7	153 aa		13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	KLHL7	Q8IXQ5	586 aa		13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	BLID	Q8IZY5	108 aa		13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	FERMT2	Q96AC1	680 aa		13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	MED4	Q9NPJ6	270 aa		13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.96	□□□□□ -0.17	8e-8	■■■■□ 25.6
DDR1-238	ENST00000446312	HPCAL4	Q9UM19	191 aa		13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	MROH5	Q6ZUA9	1318 aa		13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	LMTK3	Q96Q04	1460 aa		13.96	□□□□□ -0.17
DDR1-238	ENST00000446312		F8W031	263 aa	Predicted RBP	13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	PSMA7	O14818	248 aa		13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	PRPF3	O43395	683 aa	Known RBP	13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	LLGL1	Q15334	1064 aa		13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	SPA17	Q15506	151 aa		13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	CAVIN4	Q5BKX8	364 aa		13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	SH3RF1	Q7Z6J0	888 aa		13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	ZNF579	Q8NAF0	562 aa	Known RBP	13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	BCAS4	Q8TDM0	211 aa		13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	PPM1E	Q8WY54	764 aa		13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	EXOC1	Q9NV70	894 aa		13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	RWDD2A	Q9UIY3	292 aa		13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	CNTNAP5	Q8WYK1	1306 aa		13.96	□□□□□ -0.17
DDR1-238	ENST00000446312	MYH2	Q9UKX2	1941 aa		13.96	□□□□□ -0.18
DDR1-238	ENST00000446312	MYH15	Q9Y2K3	1946 aa		13.96	□□□□□ -0.18
DDR1-238	ENST00000446312	ZNF263	O14978	683 aa		13.96	□□□□□ -0.18
DDR1-238	ENST00000446312	EIF4A3	P38919	411 aa	Known RBP	13.96	□□□□□ -0.18
DDR1-238	ENST00000446312	GRIK5	Q16478	980 aa		13.96	□□□□□ -0.18
DDR1-238	ENST00000446312	NAALADL2	Q58DX5	795 aa		13.96	□□□□□ -0.18
DDR1-238	ENST00000446312	ANKRD18A	Q8IVF6	992 aa		13.96	□□□□□ -0.18
DDR1-238	ENST00000446312	PNMA1	Q8ND90	353 aa		13.96	□□□□□ -0.18
DDR1-238	ENST00000446312	SPATA20	Q8TB22	786 aa		13.96	□□□□□ -0.18
DDR1-238	ENST00000446312	TGFBRAP1	Q8WUH2	860 aa		13.96	□□□□□ -0.18
DDR1-238	ENST00000446312	SLC24A3	Q9HC58	644 aa		13.96	□□□□□ -0.18
DDR1-238	ENST00000446312	EXOC5	O00471	708 aa		13.95	□□□□□ -0.18
DDR1-238	ENST00000446312	AMPD2	Q01433	879 aa		13.95	□□□□□ -0.18
DDR1-238	ENST00000446312	MKRN4P	Q13434	485 aa	Predicted RBP	13.95	□□□□□ -0.18
DDR1-238	ENST00000446312	ADAT2	Q7Z6V5	191 aa	Known RBP	13.95	□□□□□ -0.18
DDR1-238	ENST00000446312	DZIP1	Q86YF9	867 aa	Known RBP	13.95	□□□□□ -0.18
DDR1-238	ENST00000446312	GIMAP7	Q8NHV1	300 aa		13.95	□□□□□ -0.18
DDR1-238	ENST00000446312	RUFY1	Q96T51	708 aa		13.95	□□□□□ -0.18
DDR1-238	ENST00000446312	NAA15	Q9BXJ9	866 aa	Known RBP	13.95	□□□□□ -0.18
DDR1-238	ENST00000446312	IFIH1	Q9BYX4	1025 aa	Known RBP	13.95	□□□□□ -0.18
DDR1-238	ENST00000446312	BCS1L	Q9Y276	419 aa		13.95	□□□□□ -0.18
DDR1-238	ENST00000446312	PCNT	O95613	3336 aa		13.95	□□□□□ -0.18
DDR1-238	ENST00000446312	GLI3	P10071	1580 aa		13.95	□□□□□ -0.18
DDR1-238	ENST00000446312	WDR19	Q8NEZ3	1342 aa		13.95	□□□□□ -0.18
DDR1-238	ENST00000446312	KRT86	O43790	486 aa		13.95	□□□□□ -0.18

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