RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 IL23AQ9NPF7 189 aa7.09□□□□□ -1.28
PTPRR-204ENST00000440835 FBXO28Q9NVF7 368 aa7.09□□□□□ -1.28
PTPRR-204ENST00000440835 ZMYM6O95789 1325 aa7.08□□□□□ -1.28
PTPRR-204ENST00000440835 NKRFO15226 690 aaKnown RBP eCLIP7.08□□□□□ -1.28
PTPRR-204ENST00000440835 PGK1P00558 417 aa7.08□□□□□ -1.28
PTPRR-204ENST00000440835 CD4P01730 458 aa7.08□□□□□ -1.28
PTPRR-204ENST00000440835 PTMAP06454 111 aaKnown RBP7.08□□□□□ -1.28
PTPRR-204ENST00000440835 NOVP48745 357 aa7.08□□□□□ -1.28
PTPRR-204ENST00000440835 TDO2P48775 406 aa7.08□□□□□ -1.28
PTPRR-204ENST00000440835 PTPN11Q06124 597 aaPredicted RBP7.08□□□□□ -1.28
PTPRR-204ENST00000440835 TJAP1Q5JTD0 557 aa7.08□□□□□ -1.28
PTPRR-204ENST00000440835 SH3RF1Q7Z6J0 888 aa7.08□□□□□ -1.28
PTPRR-204ENST00000440835 DCAF4Q8WV16 495 aa7.08□□□□□ -1.28
PTPRR-204ENST00000440835 FERMT2Q96AC1 680 aa7.08□□□□□ -1.28
PTPRR-204ENST00000440835 AP5M1Q9H0R1 490 aa7.08□□□□□ -1.28
PTPRR-204ENST00000440835 TSPYL2Q9H2G4 693 aaPredicted RBP7.08□□□□□ -1.28
PTPRR-204ENST00000440835 TTYH1Q9H313 450 aaPredicted RBP7.08□□□□□ -1.28
PTPRR-204ENST00000440835 POLR3EQ9NVU0 708 aa7.08□□□□□ -1.28
PTPRR-204ENST00000440835 CLIP2Q9UDT6 1046 aa7.08□□□□□ -1.28
PTPRR-204ENST00000440835 ADD3Q9UEY8 706 aaKnown RBP7.08□□□□□ -1.28
PTPRR-204ENST00000440835 MSRAQ9UJ68 235 aa7.08□□□□□ -1.28
PTPRR-204ENST00000440835 ANAPC4Q9UJX5 808 aa7.08□□□□□ -1.28
PTPRR-204ENST00000440835 MKI67P46013 3256 aaKnown RBP7.08□□□□□ -1.28
PTPRR-204ENST00000440835 CENPFP49454 3210 aa7.08□□□□□ -1.28
PTPRR-204ENST00000440835 GPAA1O43292 621 aa7.08□□□□□ -1.28
PTPRR-204ENST00000440835 PQBP1O60828 265 aaKnown RBP7.08□□□□□ -1.28
PTPRR-204ENST00000440835 SUPT20HL2P0C7V6 817 aa7.08□□□□□ -1.28
PTPRR-204ENST00000440835 ALX1Q15699 326 aa7.08□□□□□ -1.28
PTPRR-204ENST00000440835 SLFN13Q68D06 897 aa7.08□□□□□ -1.28
PTPRR-204ENST00000440835 ARMCX2Q7L311 632 aa7.08□□□□□ -1.28
PTPRR-204ENST00000440835 TIFAQ96CG3 184 aa7.08□□□□□ -1.28
PTPRR-204ENST00000440835 KATNBL1Q9H079 304 aa7.08□□□□□ -1.28
PTPRR-204ENST00000440835 ZHX1Q9UKY1 873 aaPredicted RBP7.08□□□□□ -1.28
PTPRR-204ENST00000440835 ASGR1P07306 291 aa7.07□□□□□ -1.28
PTPRR-204ENST00000440835 TSPY3P0CV98 308 aa7.07□□□□□ -1.28
PTPRR-204ENST00000440835 TSPY8P0CW00 308 aa7.07□□□□□ -1.28
PTPRR-204ENST00000440835 TAL1P17542 331 aaPredicted RBP7.07□□□□□ -1.28
PTPRR-204ENST00000440835 TNFAIP2Q03169 654 aa7.07□□□□□ -1.28
PTPRR-204ENST00000440835 CCDC144BQ3MJ40 725 aa7.07□□□□□ -1.28
PTPRR-204ENST00000440835 TMEM240Q5SV17 173 aa7.07□□□□□ -1.28
PTPRR-204ENST00000440835 BTNL9Q6UXG8 535 aa7.07□□□□□ -1.28
PTPRR-204ENST00000440835 FAM126BQ8IXS8 530 aa7.07□□□□□ -1.28
PTPRR-204ENST00000440835 IFNL3Q8IZI9 196 aa7.07□□□□□ -1.28
PTPRR-204ENST00000440835 PRDM6Q9NQX0 595 aa7.07□□□□□ -1.28
PTPRR-204ENST00000440835 TCP11L1Q9NUJ3 509 aa7.07□□□□□ -1.28
PTPRR-204ENST00000440835 CYP2D7A0A087X1C5 515 aa7.07□□□□□ -1.28
PTPRR-204ENST00000440835 RBM47A0AV96 593 aaKnown RBP7.07□□□□□ -1.28
PTPRR-204ENST00000440835 ORC4O43929 436 aa7.07□□□□□ -1.28
PTPRR-204ENST00000440835 C6orf222P0C671 652 aaPredicted RBP7.07□□□□□ -1.28
PTPRR-204ENST00000440835 POU3F3P20264 500 aaPredicted RBP7.07□□□□□ -1.28
PTPRR-204ENST00000440835 DNAJB2P25686 324 aa7.07□□□□□ -1.28
PTPRR-204ENST00000440835 BRDTQ58F21 947 aaPredicted RBP7.07□□□□□ -1.28
PTPRR-204ENST00000440835 CCDC178Q5BJE1 867 aa7.07□□□□□ -1.28
PTPRR-204ENST00000440835 BBXQ8WY36 941 aaPredicted RBP7.07□□□□□ -1.28
PTPRR-204ENST00000440835 OSBP2Q969R2 916 aa7.07□□□□□ -1.28
PTPRR-204ENST00000440835 CEP95Q96GE4 821 aa7.07□□□□□ -1.28
PTPRR-204ENST00000440835 GZF1Q9H116 711 aaPredicted RBP7.07□□□□□ -1.28
PTPRR-204ENST00000440835 SLKQ9H2G2 1235 aaPredicted RBP7.07□□□□□ -1.28
PTPRR-204ENST00000440835 ZNF576Q9H609 170 aa7.07□□□□□ -1.28
PTPRR-204ENST00000440835 RAD50Q92878 1312 aa7.07□□□□□ -1.28
PTPRR-204ENST00000440835 MINDY4BA8MYZ0 360 aa7.06□□□□□ -1.28
PTPRR-204ENST00000440835 PARNO95453 639 aaKnown RBP7.06□□□□□ -1.28
PTPRR-204ENST00000440835 FGRP09769 529 aa7.06□□□□□ -1.28
PTPRR-204ENST00000440835 EVX2Q03828 476 aa7.06□□□□□ -1.28
PTPRR-204ENST00000440835 GNASQ5JWF2 1037 aa7.06□□□□□ -1.28
PTPRR-204ENST00000440835 ZMYM1Q5SVZ6 1142 aa7.06□□□□□ -1.28
PTPRR-204ENST00000440835 ANO1Q5XXA6 986 aa7.06□□□□□ -1.28
PTPRR-204ENST00000440835 CLEC10AQ8IUN9 316 aa7.06□□□□□ -1.28
PTPRR-204ENST00000440835 RGS22Q8NE09 1264 aa7.06□□□□□ -1.28
PTPRR-204ENST00000440835 MYLIPQ8WY64 445 aa7.06□□□□□ -1.28
PTPRR-204ENST00000440835 KIFC2Q96AC6 838 aa7.06□□□□□ -1.28
PTPRR-204ENST00000440835 FGD4Q96M96 766 aa7.06□□□□□ -1.28
PTPRR-204ENST00000440835 NAPBQ9H115 298 aa7.06□□□□□ -1.28
PTPRR-204ENST00000440835 GNEQ9Y223 722 aaKnown RBP7.06□□□□□ -1.28
PTPRR-204ENST00000440835 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.06□□□□□ -1.28
PTPRR-204ENST00000440835 PCDHA11Q9Y5I1 949 aa7.06□□□□□ -1.28
PTPRR-204ENST00000440835 MYCNP04198 464 aaPredicted RBP7.06□□□□□ -1.28
PTPRR-204ENST00000440835 PPARAQ07869 468 aa7.06□□□□□ -1.28
PTPRR-204ENST00000440835 FSCN1Q16658 493 aaKnown RBP7.06□□□□□ -1.28
PTPRR-204ENST00000440835 AAK1Q2M2I8 961 aa7.06□□□□□ -1.28
PTPRR-204ENST00000440835 KIAA1211Q6ZU35 1233 aa7.06□□□□□ -1.28
PTPRR-204ENST00000440835 RAVER2Q9HCJ3 691 aaKnown RBP7.06□□□□□ -1.28
PTPRR-204ENST00000440835 RNF146Q9NTX7 359 aa7.06□□□□□ -1.28
PTPRR-204ENST00000440835 ARIH1Q9Y4X5 557 aaPredicted RBP7.06□□□□□ -1.28
PTPRR-204ENST00000440835 RIPK3Q9Y572 518 aa7.06□□□□□ -1.28
PTPRR-204ENST00000440835 WDR19Q8NEZ3 1342 aa7.06□□□□□ -1.28
PTPRR-204ENST00000440835 MCM3APO60318 1980 aa7.06□□□□□ -1.28
PTPRR-204ENST00000440835 BRCA2P51587 3418 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 CTAGE5O15320 804 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 FGBP02675 491 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 ICAM1P05362 532 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 ITGB8P26012 769 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 SLC1A4P43007 532 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 CPT1AP50416 773 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 CCDC144CPQ8IYA2 1237 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 DNERQ8NFT8 737 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 PHOSPHO2Q8TCD6 241 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 TTC14Q96N46 770 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.05□□□□□ -1.28
PTPRR-204ENST00000440835 RANBP17Q9H2T7 1088 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms