RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 CCDC148Q8NFR7 591 aa15.18■□□□□ 0.02
HERPUD1-204ENST00000439977 TBCKQ8TEA7 893 aa15.18■□□□□ 0.02
HERPUD1-204ENST00000439977 SH3GLB2Q9NR46 395 aa15.18■□□□□ 0.02
HERPUD1-204ENST00000439977 VPS18Q9P253 973 aa15.18■□□□□ 0.02
HERPUD1-204ENST00000439977 RTCBQ9Y3I0 505 aaKnown RBP15.18■□□□□ 0.02
HERPUD1-204ENST00000439977 SRCAPQ6ZRS2 3230 aa15.18■□□□□ 0.02
HERPUD1-204ENST00000439977 RASSF10A6NK89 507 aa15.17■□□□□ 0.02
HERPUD1-204ENST00000439977 RPS6KA4O75676 772 aa15.17■□□□□ 0.02
HERPUD1-204ENST00000439977 RHOBTB3O94955 611 aa15.17■□□□□ 0.02
HERPUD1-204ENST00000439977 PLEKP08567 350 aaPredicted RBP15.17■□□□□ 0.02
HERPUD1-204ENST00000439977 OR52Z1P0C646 297 aa15.17■□□□□ 0.02
HERPUD1-204ENST00000439977 CDK8P49336 464 aa15.17■□□□□ 0.02
HERPUD1-204ENST00000439977 GNAQP50148 359 aa15.17■□□□□ 0.02
HERPUD1-204ENST00000439977 BRD3Q15059 726 aa15.17■□□□□ 0.02
HERPUD1-204ENST00000439977 KRT26Q7Z3Y9 468 aa15.17■□□□□ 0.02
HERPUD1-204ENST00000439977 POTEDQ86YR6 584 aa15.17■□□□□ 0.02
HERPUD1-204ENST00000439977 WDR66Q8TBY9 1149 aa15.17■□□□□ 0.02
HERPUD1-204ENST00000439977 ZFP91Q96JP5 570 aaPredicted RBP15.17■□□□□ 0.02
HERPUD1-204ENST00000439977 CNOT6LQ96LI5 555 aaKnown RBP15.17■□□□□ 0.02
HERPUD1-204ENST00000439977 TRIM9Q9C026 710 aa15.17■□□□□ 0.02
HERPUD1-204ENST00000439977 EXOC1Q9NV70 894 aa15.17■□□□□ 0.02
HERPUD1-204ENST00000439977 CCNL1Q9UK58 526 aaPredicted RBP15.17■□□□□ 0.02
HERPUD1-204ENST00000439977 CCDC66A2RUB6 948 aa15.17■□□□□ 0.02
HERPUD1-204ENST00000439977 ZNF185O15231 689 aa15.17■□□□□ 0.02
HERPUD1-204ENST00000439977 ATP8B1O43520 1251 aa15.17■□□□□ 0.02
HERPUD1-204ENST00000439977 LMAN1P49257 510 aa15.17■□□□□ 0.02
HERPUD1-204ENST00000439977 ATP2B2Q01814 1243 aa15.17■□□□□ 0.02
HERPUD1-204ENST00000439977 TRIM14Q14142 442 aa15.17■□□□□ 0.02
HERPUD1-204ENST00000439977 SMCR8Q8TEV9 937 aaPredicted RBP15.17■□□□□ 0.02
HERPUD1-204ENST00000439977 COA7Q96BR5 231 aa15.17■□□□□ 0.02
HERPUD1-204ENST00000439977 CEP95Q96GE4 821 aa15.17■□□□□ 0.02
HERPUD1-204ENST00000439977 DRC1Q96MC2 740 aa15.17■□□□□ 0.02
HERPUD1-204ENST00000439977 MMS19Q96T76 1030 aa15.17■□□□□ 0.02
HERPUD1-204ENST00000439977 ADAM21Q9UKJ8 722 aa15.17■□□□□ 0.02
HERPUD1-204ENST00000439977 USP17L5A8MUK1 530 aa15.16■□□□□ 0.02
HERPUD1-204ENST00000439977 AMPD2Q01433 879 aa15.16■□□□□ 0.02
HERPUD1-204ENST00000439977 NOC4LQ9BVI4 516 aaKnown RBP15.16■□□□□ 0.02
HERPUD1-204ENST00000439977 CCSER1Q9C0I3 900 aa15.16■□□□□ 0.02
HERPUD1-204ENST00000439977 CAPN11Q9UMQ6 739 aa15.16■□□□□ 0.02
HERPUD1-204ENST00000439977 FLT1P17948 1338 aa15.16■□□□□ 0.02
HERPUD1-204ENST00000439977 MRPS25P82663 173 aaKnown RBP15.16■□□□□ 0.02
HERPUD1-204ENST00000439977 NONOQ15233 471 aaKnown RBP eCLIP15.16■□□□□ 0.02
HERPUD1-204ENST00000439977 TEX11Q8IYF3 940 aa15.16■□□□□ 0.02
HERPUD1-204ENST00000439977 MYH8P13535 1937 aa15.16■□□□□ 0.02
HERPUD1-204ENST00000439977 F8W031 263 aaPredicted RBP15.16■□□□□ 0.02
HERPUD1-204ENST00000439977 MAP2K7O14733 419 aa15.16■□□□□ 0.02
HERPUD1-204ENST00000439977 EEF1GP26641 437 aaKnown RBP15.16■□□□□ 0.02
HERPUD1-204ENST00000439977 RFC4P35249 363 aa15.16■□□□□ 0.02
HERPUD1-204ENST00000439977 PICALMQ13492 652 aa15.16■□□□□ 0.02
HERPUD1-204ENST00000439977 KCNB1Q14721 858 aa15.16■□□□□ 0.02
HERPUD1-204ENST00000439977 P2RX5Q93086 422 aa15.16■□□□□ 0.02
HERPUD1-204ENST00000439977 CCDC102AQ96A19 550 aa15.16■□□□□ 0.02
HERPUD1-204ENST00000439977 DNAJC7Q99615 494 aa15.16■□□□□ 0.02
HERPUD1-204ENST00000439977 THAP9Q9H5L6 903 aa15.16■□□□□ 0.02
HERPUD1-204ENST00000439977 NHEJ1Q9H9Q4 299 aaPredicted RBP15.16■□□□□ 0.02
HERPUD1-204ENST00000439977 FAM207AQ9NSI2 230 aaPredicted RBP15.16■□□□□ 0.02
HERPUD1-204ENST00000439977 L1RE1Q9UN81 338 aa15.16■□□□□ 0.02
HERPUD1-204ENST00000439977 PDS5AQ29RF7 1337 aaKnown RBP15.15■□□□□ 0.02
HERPUD1-204ENST00000439977 SLURP2P0DP57 97 aa15.15■□□□□ 0.02
HERPUD1-204ENST00000439977 IDEP14735 1019 aa15.15■□□□□ 0.02
HERPUD1-204ENST00000439977 SOGA3Q5TF21 947 aa15.15■□□□□ 0.02
HERPUD1-204ENST00000439977 LRRC47Q8N1G4 583 aaKnown RBP15.15■□□□□ 0.02
HERPUD1-204ENST00000439977 NGLY1Q96IV0 654 aa15.15■□□□□ 0.02
HERPUD1-204ENST00000439977 PSMB7Q99436 277 aa15.15■□□□□ 0.02
HERPUD1-204ENST00000439977 MMTAG2Q9BU76 263 aaKnown RBP15.15■□□□□ 0.02
HERPUD1-204ENST00000439977 RTFDC1Q9BY42 306 aaPredicted RBP15.15■□□□□ 0.02
HERPUD1-204ENST00000439977 ZMYND12Q9H0C1 365 aa15.15■□□□□ 0.02
HERPUD1-204ENST00000439977 SEC63Q9UGP8 760 aaKnown RBP15.15■□□□□ 0.02
HERPUD1-204ENST00000439977 UFL1O94874 794 aa15.15■□□□□ 0.02
HERPUD1-204ENST00000439977 SRGNP10124 158 aa15.15■□□□□ 0.02
HERPUD1-204ENST00000439977 DNM2P50570 870 aa15.15■□□□□ 0.02
HERPUD1-204ENST00000439977 WHAMMP3Q1A5X7 153 aa15.15■□□□□ 0.02
HERPUD1-204ENST00000439977 BARGINQ6ZT62 677 aa15.15■□□□□ 0.02
HERPUD1-204ENST00000439977 HDXQ7Z353 690 aa15.15■□□□□ 0.02
HERPUD1-204ENST00000439977 NEK8Q86SG6 692 aa15.15■□□□□ 0.02
HERPUD1-204ENST00000439977 GSPT2Q8IYD1 628 aaKnown RBP15.15■□□□□ 0.02
HERPUD1-204ENST00000439977 MSANTD4Q8NCY6 345 aa15.15■□□□□ 0.02
HERPUD1-204ENST00000439977 GLIS3Q8NEA6 775 aa15.15■□□□□ 0.02
HERPUD1-204ENST00000439977 JAKMIP2Q96AA8 810 aa15.15■□□□□ 0.02
HERPUD1-204ENST00000439977 IRS2Q9Y4H2 1338 aa15.15■□□□□ 0.02
HERPUD1-204ENST00000439977 A0A1B0GUL6 1792 aa15.15■□□□□ 0.02
HERPUD1-204ENST00000439977 POTEMA6NI47 508 aa15.14■□□□□ 0.01
HERPUD1-204ENST00000439977 EPHB6O15197 1021 aa15.14■□□□□ 0.01
HERPUD1-204ENST00000439977 GPSM2P81274 684 aa15.14■□□□□ 0.01
HERPUD1-204ENST00000439977 LRRC41Q15345 812 aa15.14■□□□□ 0.01
HERPUD1-204ENST00000439977 KIAA0895Q8NCT3 520 aa15.14■□□□□ 0.01
HERPUD1-204ENST00000439977 ANKS1AQ92625 1134 aa15.14■□□□□ 0.01
HERPUD1-204ENST00000439977 RRP36Q96EU6 259 aaKnown RBP15.14■□□□□ 0.01
HERPUD1-204ENST00000439977 C6orf50Q9HD87 102 aa15.14■□□□□ 0.01
HERPUD1-204ENST00000439977 RAB21Q9UL25 225 aa15.14■□□□□ 0.01
HERPUD1-204ENST00000439977 ERLIN1O75477 346 aa15.14■□□□□ 0.01
HERPUD1-204ENST00000439977 TDP2O95551 362 aa15.14■□□□□ 0.01
HERPUD1-204ENST00000439977 CASP8Q14790 479 aa15.14■□□□□ 0.01
HERPUD1-204ENST00000439977 NUDT12Q9BQG2 462 aa15.14■□□□□ 0.01
HERPUD1-204ENST00000439977 SEMA6BQ9H3T3 888 aa15.14■□□□□ 0.01
HERPUD1-204ENST00000439977 HAUS4Q9H6D7 363 aa15.14■□□□□ 0.01
HERPUD1-204ENST00000439977 JADE2Q9NQC1 790 aa15.14■□□□□ 0.01
HERPUD1-204ENST00000439977 FAN1Q9Y2M0 1017 aa15.14■□□□□ 0.01
HERPUD1-204ENST00000439977 SAR1BQ9Y6B6 198 aa15.14■□□□□ 0.01
HERPUD1-204ENST00000439977 CNTNAP4Q9C0A0 1308 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms