RNA–Protein interactions for RNA: ENST00000439961.2

SUMO1P3-201, Transcript of SUMO1 pseudogene 3, humanhuman

BASIC

Gene SUMO1P3, Length 304 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1P3-201ENST00000439961 ADH4P08319 380 aa4.12□□□□□ -1.75
SUMO1P3-201ENST00000439961 CACNB2Q08289 660 aaPredicted RBP4.12□□□□□ -1.75
SUMO1P3-201ENST00000439961 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.12□□□□□ -1.75
SUMO1P3-201ENST00000439961 USP39Q53GS9 565 aaKnown RBP4.12□□□□□ -1.75
SUMO1P3-201ENST00000439961 SLFN13Q68D06 897 aa4.12□□□□□ -1.75
SUMO1P3-201ENST00000439961 ARHGEF18Q6ZSZ5 1173 aa4.12□□□□□ -1.75
SUMO1P3-201ENST00000439961 TMC3Q7Z5M5 1100 aa4.12□□□□□ -1.75
SUMO1P3-201ENST00000439961 DDX11Q96FC9 970 aa4.12□□□□□ -1.75
SUMO1P3-201ENST00000439961 SRCIN1Q9C0H9 1055 aa4.12□□□□□ -1.75
SUMO1P3-201ENST00000439961 ANTXR1Q9H6X2 564 aa4.12□□□□□ -1.75
SUMO1P3-201ENST00000439961 CYP2C8P10632 490 aa4.11□□□□□ -1.75
SUMO1P3-201ENST00000439961 CEBPAP49715 358 aaPredicted RBP4.11□□□□□ -1.75
SUMO1P3-201ENST00000439961 PPP2CBP62714 309 aa4.11□□□□□ -1.75
SUMO1P3-201ENST00000439961 PPP2CAP67775 309 aa4.11□□□□□ -1.75
SUMO1P3-201ENST00000439961 RNF4P78317 190 aa4.11□□□□□ -1.75
SUMO1P3-201ENST00000439961 DAB2P98082 770 aa4.11□□□□□ -1.75
SUMO1P3-201ENST00000439961 SEPT6Q14141 434 aa4.11□□□□□ -1.75
SUMO1P3-201ENST00000439961 JAMLQ86YT9 394 aa4.11□□□□□ -1.75
SUMO1P3-201ENST00000439961 SLFN12Q8IYM2 578 aa4.11□□□□□ -1.75
SUMO1P3-201ENST00000439961 BCANQ96GW7 911 aa4.11□□□□□ -1.75
SUMO1P3-201ENST00000439961 PDLIM7Q9NR12 457 aa4.11□□□□□ -1.75
SUMO1P3-201ENST00000439961 PRAMEF1O95521 474 aa4.1□□□□□ -1.75
SUMO1P3-201ENST00000439961 TTBK2Q6IQ55 1244 aa4.1□□□□□ -1.75
SUMO1P3-201ENST00000439961 PHACTR4Q8IZ21 702 aa4.1□□□□□ -1.75
SUMO1P3-201ENST00000439961 ALKBH8Q96BT7 664 aaKnown RBP4.1□□□□□ -1.75
SUMO1P3-201ENST00000439961 TSPAN17Q96FV3 270 aa4.1□□□□□ -1.75
SUMO1P3-201ENST00000439961 CCDC74BQ96LY2 380 aa4.1□□□□□ -1.75
SUMO1P3-201ENST00000439961 DMRTB1Q96MA1 342 aa4.1□□□□□ -1.75
SUMO1P3-201ENST00000439961 BCAS3Q9H6U6 928 aa4.1□□□□□ -1.75
SUMO1P3-201ENST00000439961 ICMTO60725 284 aa4.09□□□□□ -1.75
SUMO1P3-201ENST00000439961 PLCG1P19174 1290 aa4.09□□□□□ -1.75
SUMO1P3-201ENST00000439961 BMP5P22003 454 aa4.09□□□□□ -1.75
SUMO1P3-201ENST00000439961 PCSK4Q6UW60 755 aa4.09□□□□□ -1.75
SUMO1P3-201ENST00000439961 AEBP1Q8IUX7 1158 aa4.09□□□□□ -1.75
SUMO1P3-201ENST00000439961 GLYCTKQ8IVS8 523 aa4.09□□□□□ -1.75
SUMO1P3-201ENST00000439961 NAT16Q8N8M0 369 aa4.09□□□□□ -1.75
SUMO1P3-201ENST00000439961 ADOQ96SZ5 270 aa4.09□□□□□ -1.75
SUMO1P3-201ENST00000439961 PCDH18Q9HCL0 1135 aa4.09□□□□□ -1.75
SUMO1P3-201ENST00000439961 H3BRB1 525 aa4.08□□□□□ -1.76
SUMO1P3-201ENST00000439961 DDX3XO00571 662 aaKnown RBP eCLIP4.08□□□□□ -1.76
SUMO1P3-201ENST00000439961 RAMP2O60895 175 aa4.08□□□□□ -1.76
SUMO1P3-201ENST00000439961 ZNF205O95201 554 aa4.08□□□□□ -1.76
SUMO1P3-201ENST00000439961 DGCR2P98153 550 aa4.08□□□□□ -1.76
SUMO1P3-201ENST00000439961 HLA-DQA1Q5Y7H0 255 aa4.08□□□□□ -1.76
SUMO1P3-201ENST00000439961 KYQ8NBH2 561 aa4.08□□□□□ -1.76
SUMO1P3-201ENST00000439961 GORASP1Q9BQQ3 440 aa4.08□□□□□ -1.76
SUMO1P3-201ENST00000439961 C11orf84Q9BUA3 381 aaPredicted RBP4.08□□□□□ -1.76
SUMO1P3-201ENST00000439961 TUT1Q9H6E5 874 aaKnown RBP4.08□□□□□ -1.76
SUMO1P3-201ENST00000439961 EGFL7Q9UHF1 273 aa4.08□□□□□ -1.76
SUMO1P3-201ENST00000439961 SIGLEC6O43699 453 aa4.07□□□□□ -1.76
SUMO1P3-201ENST00000439961 CYP1A1P04798 512 aaPredicted RBP4.07□□□□□ -1.76
SUMO1P3-201ENST00000439961 CTGFP29279 349 aa4.07□□□□□ -1.76
SUMO1P3-201ENST00000439961 RETREG2Q8NC44 543 aa4.07□□□□□ -1.76
SUMO1P3-201ENST00000439961 PBXIP1Q96AQ6 731 aa4.07□□□□□ -1.76
SUMO1P3-201ENST00000439961 AP5S1Q9NUS5 200 aa4.07□□□□□ -1.76
SUMO1P3-201ENST00000439961 INO80B-WBP1J3KQ70 363 aa4.06□□□□□ -1.76
SUMO1P3-201ENST00000439961 TACR1P25103 407 aa4.06□□□□□ -1.76
SUMO1P3-201ENST00000439961 BMP8BP34820 402 aa4.06□□□□□ -1.76
SUMO1P3-201ENST00000439961 RPS26P62854 115 aaKnown RBP4.06□□□□□ -1.76
SUMO1P3-201ENST00000439961 RPL6Q02878 288 aaKnown RBP4.06□□□□□ -1.76
SUMO1P3-201ENST00000439961 TRIM26Q12899 539 aaPredicted RBP4.06□□□□□ -1.76
SUMO1P3-201ENST00000439961 SLC9A5Q14940 896 aa4.06□□□□□ -1.76
SUMO1P3-201ENST00000439961 TMEM201Q5SNT2 666 aa4.06□□□□□ -1.76
SUMO1P3-201ENST00000439961 PAPD7Q5XG87 772 aaKnown RBP4.06□□□□□ -1.76
SUMO1P3-201ENST00000439961 KRTAP5-1Q6L8H4 278 aa4.06□□□□□ -1.76
SUMO1P3-201ENST00000439961 SV2BQ7L1I2 683 aa4.06□□□□□ -1.76
SUMO1P3-201ENST00000439961 USP48Q86UV5 1035 aa4.06□□□□□ -1.76
SUMO1P3-201ENST00000439961 CABP7Q86V35 215 aa4.06□□□□□ -1.76
SUMO1P3-201ENST00000439961 TTLL6Q8N841 843 aa4.06□□□□□ -1.76
SUMO1P3-201ENST00000439961 TMEM52Q8NDY8 209 aa4.06□□□□□ -1.76
SUMO1P3-201ENST00000439961 NTN5Q8WTR8 489 aaPredicted RBP4.06□□□□□ -1.76
SUMO1P3-201ENST00000439961 PTPN18Q99952 460 aa4.06□□□□□ -1.76
SUMO1P3-201ENST00000439961 INO80BQ9C086 356 aaPredicted RBP4.06□□□□□ -1.76
SUMO1P3-201ENST00000439961 ADARB2Q9NS39 739 aaKnown RBP4.06□□□□□ -1.76
SUMO1P3-201ENST00000439961 PTGFRNQ9P2B2 879 aa4.06□□□□□ -1.76
SUMO1P3-201ENST00000439961 PCDHB5Q9Y5E4 795 aa4.06□□□□□ -1.76
SUMO1P3-201ENST00000439961 CORINQ9Y5Q5 1042 aa4.06□□□□□ -1.76
SUMO1P3-201ENST00000439961 CORO7P57737 925 aa4.05□□□□□ -1.76
SUMO1P3-201ENST00000439961 ARHGAP4P98171 946 aa4.05□□□□□ -1.76
SUMO1P3-201ENST00000439961 SNW1Q13573 536 aaKnown RBP4.05□□□□□ -1.76
SUMO1P3-201ENST00000439961 NBPF9Q3BBW0 867 aa4.05□□□□□ -1.76
SUMO1P3-201ENST00000439961 LARP4BQ92615 738 aaKnown RBP4.05□□□□□ -1.76
SUMO1P3-201ENST00000439961 EXTL1Q92935 676 aa4.05□□□□□ -1.76
SUMO1P3-201ENST00000439961 PRRX2Q99811 253 aa4.05□□□□□ -1.76
SUMO1P3-201ENST00000439961 MIR1-1HGQ9H1L0 117 aa4.05□□□□□ -1.76
SUMO1P3-201ENST00000439961 MEGF9Q9H1U4 602 aa4.05□□□□□ -1.76
SUMO1P3-201ENST00000439961 NUDT5Q9UKK9 219 aa4.05□□□□□ -1.76
SUMO1P3-201ENST00000439961 MASP2O00187 686 aa4.04□□□□□ -1.76
SUMO1P3-201ENST00000439961 CDK4P11802 303 aa4.04□□□□□ -1.76
SUMO1P3-201ENST00000439961 MAKP20794 623 aa4.04□□□□□ -1.76
SUMO1P3-201ENST00000439961 KRTAP5-9P26371 169 aa4.04□□□□□ -1.76
SUMO1P3-201ENST00000439961 GBP1P32455 592 aa4.04□□□□□ -1.76
SUMO1P3-201ENST00000439961 TSNAXIP1Q2TAA8 658 aa4.04□□□□□ -1.76
SUMO1P3-201ENST00000439961 LCE1EQ5T753 118 aa4.04□□□□□ -1.76
SUMO1P3-201ENST00000439961 PKN3Q6P5Z2 889 aa4.04□□□□□ -1.76
SUMO1P3-201ENST00000439961 CHST7Q9NS84 486 aa4.04□□□□□ -1.76
SUMO1P3-201ENST00000439961 KLHL3Q9UH77 587 aa4.04□□□□□ -1.76
SUMO1P3-201ENST00000439961 MEIS1O00470 390 aa4.03□□□□□ -1.76
SUMO1P3-201ENST00000439961 U2SURPO15042 1029 aaKnown RBP4.03□□□□□ -1.76
SUMO1P3-201ENST00000439961 C8BP07358 591 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms