RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 ZBTB43O43298 467 aa22.63■■□□□ 1.21
SEMA3B-206ENST00000439487 PLEKHA8P1O95397 391 aa22.63■■□□□ 1.21
SEMA3B-206ENST00000439487 HOMER1Q86YM7 354 aa22.63■■□□□ 1.21
SEMA3B-206ENST00000439487 TRMT44Q8IYL2 757 aaKnown RBP22.63■■□□□ 1.21
SEMA3B-206ENST00000439487 CMTR1Q8N1G2 835 aaKnown RBP22.63■■□□□ 1.21
SEMA3B-206ENST00000439487 MTMR8Q96EF0 704 aa22.63■■□□□ 1.21
SEMA3B-206ENST00000439487 PIGSQ96S52 555 aa22.63■■□□□ 1.21
SEMA3B-206ENST00000439487 PNMA2Q9UL42 364 aa22.63■■□□□ 1.21
SEMA3B-206ENST00000439487 RBBP6Q7Z6E9 1792 aaKnown RBP22.63■■□□□ 1.21
SEMA3B-206ENST00000439487 GNAQP50148 359 aa22.62■■□□□ 1.21
SEMA3B-206ENST00000439487 ZNF792Q3KQV3 632 aa22.62■■□□□ 1.21
SEMA3B-206ENST00000439487 FBXO11Q86XK2 927 aa22.62■■□□□ 1.21
SEMA3B-206ENST00000439487 FBXL16Q8N461 479 aa22.62■■□□□ 1.21
SEMA3B-206ENST00000439487 SRBD1Q8N5C6 995 aaKnown RBP22.62■■□□□ 1.21
SEMA3B-206ENST00000439487 PIBF1Q8WXW3 757 aa22.62■■□□□ 1.21
SEMA3B-206ENST00000439487 AGXT2Q9BYV1 514 aa22.62■■□□□ 1.21
SEMA3B-206ENST00000439487 A1CFQ9NQ94 594 aaKnown RBP22.62■■□□□ 1.21
SEMA3B-206ENST00000439487 DNAJC25-GNG10A0A024R161 153 aa22.61■■□□□ 1.21
SEMA3B-206ENST00000439487 ZBTB5O15062 677 aa22.61■■□□□ 1.21
SEMA3B-206ENST00000439487 TOB2Q14106 344 aaPredicted RBP22.61■■□□□ 1.21
SEMA3B-206ENST00000439487 NSMFQ6X4W1 530 aa22.61■■□□□ 1.21
SEMA3B-206ENST00000439487 CLEC4DQ8WXI8 215 aa22.61■■□□□ 1.21
SEMA3B-206ENST00000439487 MAML3Q96JK9 1138 aa22.61■■□□□ 1.21
SEMA3B-206ENST00000439487 LZTS2Q9BRK4 669 aa22.61■■□□□ 1.21
SEMA3B-206ENST00000439487 UNC93B1Q9H1C4 597 aa22.61■■□□□ 1.21
SEMA3B-206ENST00000439487 PDRG1Q9NUG6 133 aa22.61■■□□□ 1.21
SEMA3B-206ENST00000439487 GOLGA8AA7E2F4 631 aa22.6■■□□□ 1.21
SEMA3B-206ENST00000439487 GOLGA8BA8MQT2 603 aa22.6■■□□□ 1.21
SEMA3B-206ENST00000439487 NFIBO00712 420 aa22.6■■□□□ 1.21
SEMA3B-206ENST00000439487 PPP1R11O60927 126 aaPredicted RBP22.6■■□□□ 1.21
SEMA3B-206ENST00000439487 CCL5P13501 91 aa22.6■■□□□ 1.21
SEMA3B-206ENST00000439487 SOX10P56693 466 aa22.6■■□□□ 1.21
SEMA3B-206ENST00000439487 RTN1Q16799 776 aa22.6■■□□□ 1.21
SEMA3B-206ENST00000439487 TMTC3Q6ZXV5 915 aa22.6■■□□□ 1.21
SEMA3B-206ENST00000439487 SPZ1Q9BXG8 430 aa22.6■■□□□ 1.21
SEMA3B-206ENST00000439487 DIS3Q9Y2L1 958 aaKnown RBP22.6■■□□□ 1.21
SEMA3B-206ENST00000439487 ABCB11O95342 1321 aa22.59■■□□□ 1.21
SEMA3B-206ENST00000439487 PRKAR2AP13861 404 aaKnown RBP22.59■■□□□ 1.21
SEMA3B-206ENST00000439487 SMARCA1P28370 1054 aa22.59■■□□□ 1.21
SEMA3B-206ENST00000439487 CYP2C19P33261 490 aa22.59■■□□□ 1.21
SEMA3B-206ENST00000439487 CNTN2Q02246 1040 aa22.59■■□□□ 1.21
SEMA3B-206ENST00000439487 CACNB2Q08289 660 aaPredicted RBP22.59■■□□□ 1.21
SEMA3B-206ENST00000439487 MFSD14CQ5VZR4 134 aa22.59■■□□□ 1.21
SEMA3B-206ENST00000439487 OLFML2BQ68BL8 750 aa22.59■■□□□ 1.21
SEMA3B-206ENST00000439487 CCDC82Q8N4S0 544 aa22.59■■□□□ 1.21
SEMA3B-206ENST00000439487 IL17RAQ96F46 866 aa22.59■■□□□ 1.21
SEMA3B-206ENST00000439487 LARP6Q9BRS8 491 aaKnown RBP22.59■■□□□ 1.21
SEMA3B-206ENST00000439487 AMNQ9BXJ7 453 aa22.59■■□□□ 1.21
SEMA3B-206ENST00000439487 RBM28Q9NW13 759 aaKnown RBP22.59■■□□□ 1.21
SEMA3B-206ENST00000439487 CYP39A1Q9NYL5 469 aa22.59■■□□□ 1.21
SEMA3B-206ENST00000439487 PFASO15067 1338 aa22.58■■□□□ 1.21
SEMA3B-206ENST00000439487 PNMA6FA0A0J9YX94 578 aa22.58■■□□□ 1.21
SEMA3B-206ENST00000439487 POTEB2H3BUK9 544 aa22.58■■□□□ 1.21
SEMA3B-206ENST00000439487 IGHA2P01877 340 aa22.58■■□□□ 1.21
SEMA3B-206ENST00000439487 BAATQ14032 418 aaPredicted RBP22.58■■□□□ 1.21
SEMA3B-206ENST00000439487 TMEM106CQ9BVX2 250 aa22.58■■□□□ 1.21
SEMA3B-206ENST00000439487 RNF208Q9H0X6 261 aa22.58■■□□□ 1.21
SEMA3B-206ENST00000439487 FAM217BQ9NTX9 383 aaPredicted RBP22.58■■□□□ 1.21
SEMA3B-206ENST00000439487 PTPDC1A2A3K4 754 aa22.57■■□□□ 1.2
SEMA3B-206ENST00000439487 CDC27P30260 824 aa22.57■■□□□ 1.2
SEMA3B-206ENST00000439487 METAP2P50579 478 aaKnown RBP eCLIP22.57■■□□□ 1.2
SEMA3B-206ENST00000439487 RCAN1P53805 252 aa22.57■■□□□ 1.2
SEMA3B-206ENST00000439487 MAP3K21Q5TCX8 1036 aa22.57■■□□□ 1.2
SEMA3B-206ENST00000439487 FAM133AQ8N9E0 248 aa22.57■■□□□ 1.2
SEMA3B-206ENST00000439487 TBC1D5Q92609 795 aa22.57■■□□□ 1.2
SEMA3B-206ENST00000439487 RRP36Q96EU6 259 aaKnown RBP22.57■■□□□ 1.2
SEMA3B-206ENST00000439487 FGD4Q96M96 766 aa22.57■■□□□ 1.2
SEMA3B-206ENST00000439487 PURBQ96QR8 312 aaKnown RBP22.57■■□□□ 1.2
SEMA3B-206ENST00000439487 MRPL11Q9Y3B7 192 aaKnown RBP22.57■■□□□ 1.2
SEMA3B-206ENST00000439487 PCDHA1Q9Y5I3 950 aa22.57■■□□□ 1.2
SEMA3B-206ENST00000439487 BRCA2P51587 3418 aa22.57■■□□□ 1.2
SEMA3B-206ENST00000439487 RPTORQ8N122 1335 aa22.57■■□□□ 1.2
SEMA3B-206ENST00000439487 TNRC18O15417 2968 aaPredicted RBP22.56■■□□□ 1.2
SEMA3B-206ENST00000439487 hCG_1642624A0A1W2PR95 340 aa22.56■■□□□ 1.2
SEMA3B-206ENST00000439487 POTEFA5A3E0 1075 aa22.56■■□□□ 1.2
SEMA3B-206ENST00000439487 EVCP57679 992 aa22.56■■□□□ 1.2
SEMA3B-206ENST00000439487 SLC30A10Q6XR72 485 aa22.56■■□□□ 1.2
SEMA3B-206ENST00000439487 RNF207Q6ZRF8 634 aa22.56■■□□□ 1.2
SEMA3B-206ENST00000439487 TINF2Q9BSI4 451 aa22.56■■□□□ 1.2
SEMA3B-206ENST00000439487 C22orf23Q9BZE7 217 aa22.56■■□□□ 1.2
SEMA3B-206ENST00000439487 HMX1Q9NP08 348 aaPredicted RBP22.56■■□□□ 1.2
SEMA3B-206ENST00000439487 FRMPD3Q5JV73 1810 aa22.56■■□□□ 1.2
SEMA3B-206ENST00000439487 SOWAHBA6NEL2 793 aa22.55■■□□□ 1.2
SEMA3B-206ENST00000439487 CALML3P27482 149 aa22.55■■□□□ 1.2
SEMA3B-206ENST00000439487 PDIA3P30101 505 aaKnown RBP22.55■■□□□ 1.2
SEMA3B-206ENST00000439487 CCND3P30281 292 aaPredicted RBP22.55■■□□□ 1.2
SEMA3B-206ENST00000439487 ADD1P35611 737 aaKnown RBP22.55■■□□□ 1.2
SEMA3B-206ENST00000439487 PRAMEF19Q5SWL8 479 aa22.55■■□□□ 1.2
SEMA3B-206ENST00000439487 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.55■■□□□ 1.2
SEMA3B-206ENST00000439487 CNTNAP5Q8WYK1 1306 aa22.55■■□□□ 1.2
SEMA3B-206ENST00000439487 RGS19P49795 217 aa22.54■■□□□ 1.2
SEMA3B-206ENST00000439487 RPS6P62753 249 aaKnown RBP22.54■■□□□ 1.2
SEMA3B-206ENST00000439487 TRPV1Q8NER1 839 aa22.54■■□□□ 1.2
SEMA3B-206ENST00000439487 SEC63Q9UGP8 760 aaKnown RBP22.54■■□□□ 1.2
SEMA3B-206ENST00000439487 NID2Q14112 1375 aa22.53■■□□□ 1.2
SEMA3B-206ENST00000439487 OPLAHO14841 1288 aa22.53■■□□□ 1.2
SEMA3B-206ENST00000439487 CCT2P78371 535 aaKnown RBP22.53■■□□□ 1.2
SEMA3B-206ENST00000439487 MLLT1Q03111 559 aaPredicted RBP22.53■■□□□ 1.2
SEMA3B-206ENST00000439487 FUT2Q10981 343 aa22.53■■□□□ 1.2
SEMA3B-206ENST00000439487 PPP2R5BQ15173 497 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms