RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 PNMA8AQ86V59 439 aaPredicted RBP13.35□□□□□ -0.27
NEK1-201ENST00000439128 PI4K2BQ8TCG2 481 aa13.35□□□□□ -0.27
NEK1-201ENST00000439128 SNX21Q969T3 373 aa13.35□□□□□ -0.27
NEK1-201ENST00000439128 SRGAP2CP0DJJ0 459 aa13.35□□□□□ -0.27
NEK1-201ENST00000439128 LACTBP83111 547 aaPredicted RBP13.35□□□□□ -0.27
NEK1-201ENST00000439128 GOLGA5Q8TBA6 731 aa13.35□□□□□ -0.27
NEK1-201ENST00000439128 TRERF1Q96PN7 1200 aa13.35□□□□□ -0.27
NEK1-201ENST00000439128 KIAA1024Q9UPX6 916 aa13.35□□□□□ -0.27
NEK1-201ENST00000439128 SYNMO15061 1565 aa13.35□□□□□ -0.27
NEK1-201ENST00000439128 ATXN8OSP0DMR3 200 aa13.35□□□□□ -0.27
NEK1-201ENST00000439128 SKILP12757 684 aa13.35□□□□□ -0.27
NEK1-201ENST00000439128 KARSQ15046 597 aaKnown RBP13.35□□□□□ -0.27
NEK1-201ENST00000439128 STXBP2Q15833 593 aa13.35□□□□□ -0.27
NEK1-201ENST00000439128 NLRP4Q96MN2 994 aa13.35□□□□□ -0.27
NEK1-201ENST00000439128 LZTFL1Q9NQ48 299 aa13.35□□□□□ -0.27
NEK1-201ENST00000439128 CPSF1Q10570 1443 aaKnown RBP13.35□□□□□ -0.27
NEK1-201ENST00000439128 CTAGE15A4D2H0 777 aa13.35□□□□□ -0.27
NEK1-201ENST00000439128 CTAGE8P0CG41 777 aa13.35□□□□□ -0.27
NEK1-201ENST00000439128 ANXA13P27216 316 aa13.35□□□□□ -0.27
NEK1-201ENST00000439128 CALCOCO2Q13137 446 aa13.35□□□□□ -0.27
NEK1-201ENST00000439128 KRT81Q14533 505 aa13.35□□□□□ -0.27
NEK1-201ENST00000439128 CTAGE6Q86UF2 777 aa13.35□□□□□ -0.27
NEK1-201ENST00000439128 CTAGE4Q8IX94 777 aa13.35□□□□□ -0.27
NEK1-201ENST00000439128 MYOCDQ8IZQ8 938 aa13.35□□□□□ -0.27
NEK1-201ENST00000439128 SLC16A10Q8TF71 515 aa13.35□□□□□ -0.27
NEK1-201ENST00000439128 SPATA31A5Q5VU36 1347 aa13.34□□□□□ -0.27
NEK1-201ENST00000439128 SPATA31A7Q8IWB4 1347 aa13.34□□□□□ -0.27
NEK1-201ENST00000439128 SMIM23A6NLE4 172 aa13.34□□□□□ -0.27
NEK1-201ENST00000439128 ANGEL2Q5VTE6 544 aaKnown RBP13.34□□□□□ -0.27
NEK1-201ENST00000439128 WDR11Q9BZH6 1224 aa13.34□□□□□ -0.27
NEK1-201ENST00000439128 PIDD1Q9HB75 910 aa13.34□□□□□ -0.27
NEK1-201ENST00000439128 PIH1D3Q9NQM4 214 aaKnown RBP13.34□□□□□ -0.27
NEK1-201ENST00000439128 PRDX5P30044 214 aa13.34□□□□□ -0.27
NEK1-201ENST00000439128 RNASE9P60153 205 aaKnown RBP13.34□□□□□ -0.27
NEK1-201ENST00000439128 IRX5P78411 483 aaPredicted RBP13.34□□□□□ -0.27
NEK1-201ENST00000439128 SCARF1Q14162 830 aa13.34□□□□□ -0.27
NEK1-201ENST00000439128 RASGRP4Q8TDF6 673 aa13.34□□□□□ -0.27
NEK1-201ENST00000439128 PPM1EQ8WY54 764 aa13.34□□□□□ -0.27
NEK1-201ENST00000439128 MTIF3Q9H2K0 278 aaKnown RBP13.34□□□□□ -0.27
NEK1-201ENST00000439128 GGA3Q9NZ52 723 aa13.34□□□□□ -0.27
NEK1-201ENST00000439128 POSTNQ15063 836 aa13.34□□□□□ -0.27
NEK1-201ENST00000439128 ELMOD1Q8N336 334 aa13.34□□□□□ -0.27
NEK1-201ENST00000439128 MARCH10Q8NA82 808 aaPredicted RBP13.34□□□□□ -0.27
NEK1-201ENST00000439128 TBC1D31Q96DN5 1066 aa13.34□□□□□ -0.27
NEK1-201ENST00000439128 TSGA10Q9BZW7 698 aa13.34□□□□□ -0.27
NEK1-201ENST00000439128 FEM1BQ9UK73 627 aa13.34□□□□□ -0.27
NEK1-201ENST00000439128 CTAGE9A4FU28 777 aa13.34□□□□□ -0.27
NEK1-201ENST00000439128 STAM2O75886 525 aa13.34□□□□□ -0.27
NEK1-201ENST00000439128 XRCC5P13010 732 aaKnown RBP13.34□□□□□ -0.27
NEK1-201ENST00000439128 ECE1P42892 770 aa13.34□□□□□ -0.27
NEK1-201ENST00000439128 UBE2SQ16763 222 aa13.34□□□□□ -0.27
NEK1-201ENST00000439128 ZMYM1Q5SVZ6 1142 aa13.34□□□□□ -0.27
NEK1-201ENST00000439128 C9orf131Q5VYM1 1079 aa13.34□□□□□ -0.27
NEK1-201ENST00000439128 BARGINQ6ZT62 677 aa13.34□□□□□ -0.27
NEK1-201ENST00000439128 NOSTRINQ8IVI9 506 aa13.34□□□□□ -0.27
NEK1-201ENST00000439128 LINC00116Q8NCU8 138 aa13.34□□□□□ -0.27
NEK1-201ENST00000439128 ZNF274Q96GC6 653 aaPredicted RBP13.34□□□□□ -0.27
NEK1-201ENST00000439128 ARHGEF37A1IGU5 675 aa13.33□□□□□ -0.27
NEK1-201ENST00000439128 SREBF2Q12772 1141 aa13.33□□□□□ -0.27
NEK1-201ENST00000439128 CATSPER4Q7RTX7 472 aa13.33□□□□□ -0.27
NEK1-201ENST00000439128 CNGA4Q8IV77 575 aa13.33□□□□□ -0.27
NEK1-201ENST00000439128 PLEKHG2Q9H7P9 1386 aa13.33□□□□□ -0.28
NEK1-201ENST00000439128 SOS2Q07890 1332 aaPredicted RBP13.33□□□□□ -0.28
NEK1-201ENST00000439128 UBL4BQ8N7F7 174 aa13.33□□□□□ -0.28
NEK1-201ENST00000439128 TAB2Q9NYJ8 693 aa13.33□□□□□ -0.28
NEK1-201ENST00000439128 BSPRYQ5W0U4 402 aa13.33□□□□□ -0.28
NEK1-201ENST00000439128 DSTYKQ6XUX3 929 aa13.33□□□□□ -0.28
NEK1-201ENST00000439128 NOP9Q86U38 636 aaKnown RBP13.33□□□□□ -0.28
NEK1-201ENST00000439128 ZBTB12Q9Y330 459 aaPredicted RBP13.33□□□□□ -0.28
NEK1-201ENST00000439128 SNAP23O00161 211 aa13.33□□□□□ -0.28
NEK1-201ENST00000439128 CAPN15O75808 1086 aa13.33□□□□□ -0.28
NEK1-201ENST00000439128 SNAPC2Q13487 334 aa13.33□□□□□ -0.28
NEK1-201ENST00000439128 SEPT2Q15019 361 aa13.33□□□□□ -0.28
NEK1-201ENST00000439128 CASC4Q6P4E1 433 aa13.33□□□□□ -0.28
NEK1-201ENST00000439128 ZSCAN30Q86W11 494 aa13.33□□□□□ -0.28
NEK1-201ENST00000439128 PUS7LQ9H0K6 701 aaKnown RBP13.33□□□□□ -0.28
NEK1-201ENST00000439128 PCDHA4Q9UN74 947 aa13.33□□□□□ -0.28
NEK1-201ENST00000439128 DPYSL4O14531 572 aa13.33□□□□□ -0.28
NEK1-201ENST00000439128 KIF11P52732 1056 aa13.33□□□□□ -0.28
NEK1-201ENST00000439128 MICALL1Q8N3F8 863 aa13.33□□□□□ -0.28
NEK1-201ENST00000439128 SERTAD1Q9UHV2 236 aa13.33□□□□□ -0.28
NEK1-201ENST00000439128 DNAI1Q9UI46 699 aa13.33□□□□□ -0.28
NEK1-201ENST00000439128 CAMSAP1Q5T5Y3 1602 aa13.32□□□□□ -0.28
NEK1-201ENST00000439128 H7C1W4 665 aa13.32□□□□□ -0.28
NEK1-201ENST00000439128 ZNF202O95125 648 aa13.32□□□□□ -0.28
NEK1-201ENST00000439128 PSMC4P43686 418 aa13.32□□□□□ -0.28
NEK1-201ENST00000439128 GMPSP49915 693 aaPredicted RBP13.32□□□□□ -0.28
NEK1-201ENST00000439128 TTLL4Q14679 1199 aa13.32□□□□□ -0.28
NEK1-201ENST00000439128 CCDC122Q5T0U0 273 aa13.32□□□□□ -0.28
NEK1-201ENST00000439128 CCDC186Q7Z3E2 898 aa13.32□□□□□ -0.28
NEK1-201ENST00000439128 IGSF22Q8N9C0 903 aa13.32□□□□□ -0.28
NEK1-201ENST00000439128 MRRFQ96E11 262 aaKnown RBP13.32□□□□□ -0.28
NEK1-201ENST00000439128 CEP63Q96MT8 703 aa13.32□□□□□ -0.28
NEK1-201ENST00000439128 PARK7Q99497 189 aaKnown RBP13.32□□□□□ -0.28
NEK1-201ENST00000439128 AKR1B15C9JRZ8 316 aaPredicted RBP13.32□□□□□ -0.28
NEK1-201ENST00000439128 GNA14O95837 355 aa13.32□□□□□ -0.28
NEK1-201ENST00000439128 HMGCS2P54868 508 aa13.32□□□□□ -0.28
NEK1-201ENST00000439128 MXRA7P84157 204 aa13.32□□□□□ -0.28
NEK1-201ENST00000439128 PTPN12Q05209 780 aaKnown RBP13.32□□□□□ -0.28
NEK1-201ENST00000439128 PRAMEF18Q5VWM3 479 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms