RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 GYG2O15488 501 aa12.53□□□□□ -0.4
PTCH1-209ENST00000437951 C4BPBP20851 252 aa12.53□□□□□ -0.4
PTCH1-209ENST00000437951 BLVRAP53004 296 aa12.53□□□□□ -0.4
PTCH1-209ENST00000437951 KCTD16Q68DU8 428 aa12.53□□□□□ -0.4
PTCH1-209ENST00000437951 YIPF3Q9GZM5 350 aa12.53□□□□□ -0.4
PTCH1-209ENST00000437951 ANAPC5Q9UJX4 755 aa12.53□□□□□ -0.4
PTCH1-209ENST00000437951 SUFUQ9UMX1 484 aa12.53□□□□□ -0.4
PTCH1-209ENST00000437951 BACH1O14867 736 aa12.52□□□□□ -0.4
PTCH1-209ENST00000437951 DHX9Q08211 1270 aaKnown RBP12.52□□□□□ -0.4
PTCH1-209ENST00000437951 AP1B1Q10567 949 aa12.52□□□□□ -0.4
PTCH1-209ENST00000437951 RARS2Q5T160 578 aaKnown RBP12.52□□□□□ -0.4
PTCH1-209ENST00000437951 CEP85Q6P2H3 762 aa12.52□□□□□ -0.4
PTCH1-209ENST00000437951 KSR2Q6VAB6 950 aa12.52□□□□□ -0.4
PTCH1-209ENST00000437951 H0Y626 953 aa12.52□□□□□ -0.4
PTCH1-209ENST00000437951 TRIM16O95361 564 aa12.52□□□□□ -0.4
PTCH1-209ENST00000437951 PRPF38AQ8NAV1 312 aaKnown RBP12.52□□□□□ -0.4
PTCH1-209ENST00000437951 CACTINQ8WUQ7 758 aaKnown RBP12.52□□□□□ -0.4
PTCH1-209ENST00000437951 SLC27A2O14975 620 aa12.52□□□□□ -0.41
PTCH1-209ENST00000437951 SPATA1Q5VX52 437 aa12.52□□□□□ -0.41
PTCH1-209ENST00000437951 MTRQ99707 1265 aa12.52□□□□□ -0.41
PTCH1-209ENST00000437951 ABCD1P33897 745 aa12.52□□□□□ -0.41
PTCH1-209ENST00000437951 RNF169Q8NCN4 708 aa12.52□□□□□ -0.41
PTCH1-209ENST00000437951 TTC1Q99614 292 aa12.52□□□□□ -0.41
PTCH1-209ENST00000437951 PCDHB13Q9Y5F0 798 aa12.52□□□□□ -0.41
PTCH1-209ENST00000437951 CCDC78A2IDD5 438 aa12.52□□□□□ -0.41
PTCH1-209ENST00000437951 IFNB1P01574 187 aa12.52□□□□□ -0.41
PTCH1-209ENST00000437951 PDE1BQ01064 536 aa12.52□□□□□ -0.41
PTCH1-209ENST00000437951 SYT2Q8N9I0 419 aaPredicted RBP12.52□□□□□ -0.41
PTCH1-209ENST00000437951 MSH6P52701 1360 aa12.52□□□□□ -0.41
PTCH1-209ENST00000437951 HNRNPH2P55795 449 aaKnown RBP12.52□□□□□ -0.41
PTCH1-209ENST00000437951 NEK9Q8TD19 979 aa12.52□□□□□ -0.41
PTCH1-209ENST00000437951 TCEANC2Q96MN5 208 aa12.52□□□□□ -0.41
PTCH1-209ENST00000437951 STMN3Q9NZ72 180 aa12.52□□□□□ -0.41
PTCH1-209ENST00000437951 NOD1Q9Y239 953 aa12.52□□□□□ -0.41
PTCH1-209ENST00000437951 CHEK2O96017 543 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 CCDC15Q0P6D6 951 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 HERC4Q5GLZ8 1057 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-209ENST00000437951 OSBPL9Q96SU4 736 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 STK17AQ9UEE5 414 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 KLC3Q6P597 504 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 HORMAD1Q86X24 394 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 STX19Q8N4C7 294 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 ZNF280CQ8ND82 737 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 GRAMD1AQ96CP6 724 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 RPS6KC1Q96S38 1066 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 CUEDC2Q9H467 287 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 FAM207AQ9NSI2 230 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-209ENST00000437951 DDX28Q9NUL7 540 aaKnown RBP12.51□□□□□ -0.41
PTCH1-209ENST00000437951 SUCLA2Q9P2R7 463 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-209ENST00000437951 DEFA1P59665 94 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 DEFA3P59666 94 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 SPARCL1Q14515 664 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 ATP6V0A4Q9HBG4 840 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 CASP2P42575 452 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 MED21Q13503 144 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 AKNAD1Q5T1N1 836 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 GALNT17Q6IS24 598 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 RAPH1Q70E73 1250 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 FMO2Q99518 471 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 MEIS3Q99687 375 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 KIF24Q5T7B8 1368 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 ECEL1O95672 775 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 BRD1O95696 1058 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 LRMPQ12912 555 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 MKRN3Q13064 507 aaKnown RBP12.51□□□□□ -0.41
PTCH1-209ENST00000437951 AOC3Q16853 763 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 HACE1Q8IYU2 909 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 SNX29Q8TEQ0 813 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 DYDC2Q96IM9 177 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 NYXQ9GZU5 481 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 ZFYVE9O95405 1425 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 IKBKBO14920 756 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 HNRNPRO43390 633 aaKnown RBP12.51□□□□□ -0.41
PTCH1-209ENST00000437951 H2AFZP0C0S5 128 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 LONRF3Q496Y0 759 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 H2AFVQ71UI9 128 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 MYCT1Q8N699 235 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 POMGNT1Q8WZA1 660 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 DPH5Q9H2P9 285 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 SLC24A3Q9HC58 644 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 WARS2Q9UGM6 360 aaKnown RBP12.51□□□□□ -0.41
PTCH1-209ENST00000437951 CYLC2Q14093 348 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-209ENST00000437951 CASP8Q14790 479 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.51□□□□□ -0.41
PTCH1-209ENST00000437951 STX18Q9P2W9 335 aaKnown RBP12.51□□□□□ -0.41
PTCH1-209ENST00000437951 ATP11BQ9Y2G3 1177 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 ZNF711Q9Y462 761 aa12.51□□□□□ -0.41
PTCH1-209ENST00000437951 MYO10Q9HD67 2058 aa12.5□□□□□ -0.41
PTCH1-209ENST00000437951 CAV1Q03135 178 aa12.5□□□□□ -0.41
PTCH1-209ENST00000437951 IQCB1Q15051 598 aa12.5□□□□□ -0.41
PTCH1-209ENST00000437951 TEX2Q8IWB9 1127 aa12.5□□□□□ -0.41
PTCH1-209ENST00000437951 MYOCDQ8IZQ8 938 aa12.5□□□□□ -0.41
PTCH1-209ENST00000437951 TDRD7Q8NHU6 1098 aaKnown RBP12.5□□□□□ -0.41
PTCH1-209ENST00000437951 JDP2Q8WYK2 163 aa12.5□□□□□ -0.41
PTCH1-209ENST00000437951 KIF2CQ99661 725 aa12.5□□□□□ -0.41
PTCH1-209ENST00000437951 YWHAGP61981 247 aaKnown RBP eCLIP12.5□□□□□ -0.41
PTCH1-209ENST00000437951 PIK3AP1Q6ZUJ8 805 aa12.5□□□□□ -0.41
PTCH1-209ENST00000437951 MAGEB6Q8N7X4 407 aa12.5□□□□□ -0.41
PTCH1-209ENST00000437951 ZNF229Q9UJW7 825 aa12.5□□□□□ -0.41
PTCH1-209ENST00000437951 H3BRJ5 948 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms