RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 FEZF2Q8TBJ5 459 aa6.77□□□□□ -1.33
PTPN4-205ENST00000433888 PWWP2AQ96N64 755 aa6.77□□□□□ -1.33
PTPN4-205ENST00000433888 BCL11AQ9H165 835 aa6.77□□□□□ -1.33
PTPN4-205ENST00000433888 DDX41Q9UJV9 622 aaKnown RBP6.77□□□□□ -1.33
PTPN4-205ENST00000433888 PPT2Q9UMR5 302 aa6.77□□□□□ -1.33
PTPN4-205ENST00000433888 NOL9Q5SY16 702 aaKnown RBP6.76□□□□□ -1.33
PTPN4-205ENST00000433888 CYP2R1Q6VVX0 501 aa6.76□□□□□ -1.33
PTPN4-205ENST00000433888 LSRQ86X29 649 aaPredicted RBP6.76□□□□□ -1.33
PTPN4-205ENST00000433888 SYT8Q8NBV8 401 aa6.76□□□□□ -1.33
PTPN4-205ENST00000433888 FERD3LQ96RJ6 166 aa6.76□□□□□ -1.33
PTPN4-205ENST00000433888 LUC7LQ9NQ29 371 aaKnown RBP6.76□□□□□ -1.33
PTPN4-205ENST00000433888 PLA2G2DQ9UNK4 145 aa6.76□□□□□ -1.33
PTPN4-205ENST00000433888 HCFC2Q9Y5Z7 792 aa6.76□□□□□ -1.33
PTPN4-205ENST00000433888 A0A087WZG4 1122 aa6.75□□□□□ -1.33
PTPN4-205ENST00000433888 FFAR3O14843 346 aa6.75□□□□□ -1.33
PTPN4-205ENST00000433888 CBFA2T2O43439 604 aa6.75□□□□□ -1.33
PTPN4-205ENST00000433888 CYBBP04839 570 aa6.75□□□□□ -1.33
PTPN4-205ENST00000433888 ZNF200P98182 395 aaPredicted RBP6.75□□□□□ -1.33
PTPN4-205ENST00000433888 SKOR2Q2VWA4 1001 aaPredicted RBP6.75□□□□□ -1.33
PTPN4-205ENST00000433888 PAQR3Q6TCH7 311 aa6.75□□□□□ -1.33
PTPN4-205ENST00000433888 NAT16Q8N8M0 369 aa6.75□□□□□ -1.33
PTPN4-205ENST00000433888 PTCHD1Q96NR3 888 aa6.75□□□□□ -1.33
PTPN4-205ENST00000433888 PDLIM7Q9NR12 457 aa6.75□□□□□ -1.33
PTPN4-205ENST00000433888 IFNGR1P15260 489 aa6.74□□□□□ -1.33
PTPN4-205ENST00000433888 CORO7P57737 925 aa6.74□□□□□ -1.33
PTPN4-205ENST00000433888 KRTAP10-2P60368 255 aa6.74□□□□□ -1.33
PTPN4-205ENST00000433888 JAMLQ86YT9 394 aa6.74□□□□□ -1.33
PTPN4-205ENST00000433888 ZDHHC14Q8IZN3 488 aa6.74□□□□□ -1.33
PTPN4-205ENST00000433888 MCMBPQ9BTE3 642 aa6.74□□□□□ -1.33
PTPN4-205ENST00000433888 NOL6Q9H6R4 1146 aaKnown RBP6.74□□□□□ -1.33
PTPN4-205ENST00000433888 FAM86C1Q9NVL1 165 aa6.74□□□□□ -1.33
PTPN4-205ENST00000433888 SF3B6Q9Y3B4 125 aaKnown RBP6.74□□□□□ -1.33
PTPN4-205ENST00000433888 A0A1W2PQ27 194 aa6.73□□□□□ -1.33
PTPN4-205ENST00000433888 A0A1W2PQ64 194 aa6.73□□□□□ -1.33
PTPN4-205ENST00000433888 A0A1W2PQC6 194 aa6.73□□□□□ -1.33
PTPN4-205ENST00000433888 A0A1W2PQD8 194 aa6.73□□□□□ -1.33
PTPN4-205ENST00000433888 ITGA4P13612 1032 aa6.73□□□□□ -1.33
PTPN4-205ENST00000433888 ATF2P15336 505 aa6.73□□□□□ -1.33
PTPN4-205ENST00000433888 LIMS1P48059 325 aa6.73□□□□□ -1.33
PTPN4-205ENST00000433888 POU4F1Q01851 419 aa6.73□□□□□ -1.33
PTPN4-205ENST00000433888 FBXW10Q5XX13 1052 aa6.73□□□□□ -1.33
PTPN4-205ENST00000433888 SP8Q8IXZ3 490 aa6.73□□□□□ -1.33
PTPN4-205ENST00000433888 RNF34Q969K3 372 aa6.73□□□□□ -1.33
PTPN4-205ENST00000433888 DIS3Q9Y2L1 958 aaKnown RBP6.73□□□□□ -1.33
PTPN4-205ENST00000433888 PLA2G1BP04054 148 aaKnown RBP6.72□□□□□ -1.33
PTPN4-205ENST00000433888 COL9A2Q14055 689 aaPredicted RBP6.72□□□□□ -1.33
PTPN4-205ENST00000433888 VWA3BQ502W6 1294 aa6.72□□□□□ -1.33
PTPN4-205ENST00000433888 TBC1D8O95759 1140 aa6.71□□□□□ -1.34
PTPN4-205ENST00000433888 CD3EP07766 207 aa6.71□□□□□ -1.34
PTPN4-205ENST00000433888 GLI4P10075 376 aa6.71□□□□□ -1.34
PTPN4-205ENST00000433888 PFKLP17858 780 aa6.71□□□□□ -1.34
PTPN4-205ENST00000433888 L1CAMP32004 1257 aa6.71□□□□□ -1.34
PTPN4-205ENST00000433888 SOX9P48436 509 aa6.71□□□□□ -1.34
PTPN4-205ENST00000433888 HTRA3P83110 453 aa6.71□□□□□ -1.34
PTPN4-205ENST00000433888 PRR5P85299 388 aa6.71□□□□□ -1.34
PTPN4-205ENST00000433888 FOXO4P98177 505 aa6.71□□□□□ -1.34
PTPN4-205ENST00000433888 TARBP2Q15633 366 aaKnown RBP6.71□□□□□ -1.34
PTPN4-205ENST00000433888 RCSD1Q6JBY9 416 aa6.71□□□□□ -1.34
PTPN4-205ENST00000433888 FNIP1Q8TF40 1166 aa6.71□□□□□ -1.34
PTPN4-205ENST00000433888 ZDHHC15Q96MV8 337 aa6.71□□□□□ -1.34
PTPN4-205ENST00000433888 KLHL25Q9H0H3 589 aa6.71□□□□□ -1.34
PTPN4-205ENST00000433888 GINM1Q9NU53 330 aa6.71□□□□□ -1.34
PTPN4-205ENST00000433888 F8W031 263 aaPredicted RBP6.7□□□□□ -1.34
PTPN4-205ENST00000433888 PPP1R11O60927 126 aaPredicted RBP6.7□□□□□ -1.34
PTPN4-205ENST00000433888 GIPRP48546 466 aa6.7□□□□□ -1.34
PTPN4-205ENST00000433888 SLURP1P55000 103 aa6.7□□□□□ -1.34
PTPN4-205ENST00000433888 PAK2Q13177 524 aa6.7□□□□□ -1.34
PTPN4-205ENST00000433888 TCEAL1Q15170 157 aa6.7□□□□□ -1.34
PTPN4-205ENST00000433888 BICRALQ6AI39 1079 aa6.7□□□□□ -1.34
PTPN4-205ENST00000433888 CCDC81Q6ZN84 652 aa6.7□□□□□ -1.34
PTPN4-205ENST00000433888 METTL16Q86W50 562 aaKnown RBP6.7□□□□□ -1.34
PTPN4-205ENST00000433888 TEPSINQ96N21 525 aa6.7□□□□□ -1.34
PTPN4-205ENST00000433888 HAUS7Q99871 368 aa6.7□□□□□ -1.34
PTPN4-205ENST00000433888 WHRNQ9P202 907 aa6.7□□□□□ -1.34
PTPN4-205ENST00000433888 JAG2Q9Y219 1238 aa6.7□□□□□ -1.34
PTPN4-205ENST00000433888 ZC3H12DA2A288 527 aaKnown RBP6.69□□□□□ -1.34
PTPN4-205ENST00000433888 AURKAO14965 403 aa6.69□□□□□ -1.34
PTPN4-205ENST00000433888 RECKO95980 971 aa6.69□□□□□ -1.34
PTPN4-205ENST00000433888 VAMP1P23763 118 aa6.69□□□□□ -1.34
PTPN4-205ENST00000433888 TACR1P25103 407 aa6.69□□□□□ -1.34
PTPN4-205ENST00000433888 NFKB2Q00653 900 aa6.69□□□□□ -1.34
PTPN4-205ENST00000433888 DLX2Q07687 328 aaPredicted RBP6.69□□□□□ -1.34
PTPN4-205ENST00000433888 PPP2R5DQ14738 602 aa6.69□□□□□ -1.34
PTPN4-205ENST00000433888 FRMD5Q7Z6J6 570 aa6.69□□□□□ -1.34
PTPN4-205ENST00000433888 NLGN1Q8N2Q7 840 aa6.69□□□□□ -1.34
PTPN4-205ENST00000433888 ADAM7Q9H2U9 754 aa6.69□□□□□ -1.34
PTPN4-205ENST00000433888 FBLN5Q9UBX5 448 aa6.69□□□□□ -1.34
PTPN4-205ENST00000433888 A0A1W2PQH9 124 aa6.68□□□□□ -1.34
PTPN4-205ENST00000433888 A0A1W2PQJ5 194 aa6.68□□□□□ -1.34
PTPN4-205ENST00000433888 VAMP4O75379 141 aa6.68□□□□□ -1.34
PTPN4-205ENST00000433888 ASGR2P07307 311 aa6.68□□□□□ -1.34
PTPN4-205ENST00000433888 EEF1DP3Q658K8 133 aa6.68□□□□□ -1.34
PTPN4-205ENST00000433888 SAPCD2Q86UD0 394 aa6.68□□□□□ -1.34
PTPN4-205ENST00000433888 ZNF654Q8IZM8 581 aa6.68□□□□□ -1.34
PTPN4-205ENST00000433888 ARHGEF39Q8N4T4 335 aa6.68□□□□□ -1.34
PTPN4-205ENST00000433888 ZNF513Q8N8E2 541 aaPredicted RBP6.68□□□□□ -1.34
PTPN4-205ENST00000433888 C19orf47Q8N9M1 422 aaKnown RBP6.68□□□□□ -1.34
PTPN4-205ENST00000433888 RASGRP4Q8TDF6 673 aa6.68□□□□□ -1.34
PTPN4-205ENST00000433888 KLHL6Q8WZ60 621 aa6.68□□□□□ -1.34
PTPN4-205ENST00000433888 RNF38Q9H0F5 515 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms