RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 NCAPHQ15003 741 aa8.37□□□□□ -1.07
HDAC9-213ENST00000433709 FXNQ16595 210 aa8.37□□□□□ -1.07
HDAC9-213ENST00000433709 ADAT2Q7Z6V5 191 aaKnown RBP8.37□□□□□ -1.07
HDAC9-213ENST00000433709 FAM178BQ8IXR5 827 aa8.37□□□□□ -1.07
HDAC9-213ENST00000433709 CELF2-AS1Q8N7Q2 184 aa8.37□□□□□ -1.07
HDAC9-213ENST00000433709 ADCY4Q8NFM4 1077 aa8.37□□□□□ -1.07
HDAC9-213ENST00000433709 ALPK1Q96QP1 1244 aa8.37□□□□□ -1.07
HDAC9-213ENST00000433709 ADAMTS10Q9H324 1103 aa8.37□□□□□ -1.07
HDAC9-213ENST00000433709 PPP1R1BQ9UD71 204 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-213ENST00000433709 TCFL5Q9UL49 500 aa8.37□□□□□ -1.07
HDAC9-213ENST00000433709 FHOD1Q9Y613 1164 aa8.37□□□□□ -1.07
HDAC9-213ENST00000433709 FER1L4A9Z1Z3 1794 aa8.37□□□□□ -1.07
HDAC9-213ENST00000433709 UHRF1BP1Q6BDS2 1440 aa8.37□□□□□ -1.07
HDAC9-213ENST00000433709 SAMD9LQ8IVG5 1584 aa8.36□□□□□ -1.07
HDAC9-213ENST00000433709 FKTNO75072 461 aa8.36□□□□□ -1.07
HDAC9-213ENST00000433709 DDAH1O94760 285 aa8.36□□□□□ -1.07
HDAC9-213ENST00000433709 ITGA4P13612 1032 aa8.36□□□□□ -1.07
HDAC9-213ENST00000433709 PCBP3P57721 371 aaKnown RBP8.36□□□□□ -1.07
HDAC9-213ENST00000433709 CRTC3Q6UUV7 619 aa8.36□□□□□ -1.07
HDAC9-213ENST00000433709 FIBCD1Q8N539 461 aa8.36□□□□□ -1.07
HDAC9-213ENST00000433709 LINC00116Q8NCU8 138 aa8.36□□□□□ -1.07
HDAC9-213ENST00000433709 NOL6Q9H6R4 1146 aaKnown RBP8.36□□□□□ -1.07
HDAC9-213ENST00000433709 WHRNQ9P202 907 aa8.36□□□□□ -1.07
HDAC9-213ENST00000433709 SUPT6HQ7KZ85 1726 aaKnown RBP8.36□□□□□ -1.07
HDAC9-213ENST00000433709 LMTK3Q96Q04 1460 aa8.36□□□□□ -1.07
HDAC9-213ENST00000433709 ATP7AQ04656 1500 aa8.35□□□□□ -1.07
HDAC9-213ENST00000433709 SYCP2Q9BX26 1530 aa8.35□□□□□ -1.07
HDAC9-213ENST00000433709 A2MP01023 1474 aa8.35□□□□□ -1.07
HDAC9-213ENST00000433709 SSU72P8A0A1W2PR75 194 aa8.35□□□□□ -1.07
HDAC9-213ENST00000433709 H0Y8X5 98 aa8.35□□□□□ -1.07
HDAC9-213ENST00000433709 PPP2R5DQ14738 602 aa8.35□□□□□ -1.07
HDAC9-213ENST00000433709 RNF111Q6ZNA4 994 aa8.35□□□□□ -1.07
HDAC9-213ENST00000433709 GBP3Q9H0R5 595 aa8.35□□□□□ -1.07
HDAC9-213ENST00000433709 C19orf73Q9NVV2 129 aa8.35□□□□□ -1.07
HDAC9-213ENST00000433709 APEX2Q9UBZ4 518 aa8.35□□□□□ -1.07
HDAC9-213ENST00000433709 NPATQ14207 1427 aa8.35□□□□□ -1.07
HDAC9-213ENST00000433709 NCOA2Q15596 1464 aa8.34□□□□□ -1.07
HDAC9-213ENST00000433709 SETD1BQ9UPS6 1966 aaKnown RBP8.34□□□□□ -1.07
HDAC9-213ENST00000433709 ANKRD34BA5PLL1 514 aa8.34□□□□□ -1.07
HDAC9-213ENST00000433709 GJB6O95452 261 aa8.34□□□□□ -1.07
HDAC9-213ENST00000433709 RPL10P27635 214 aaKnown RBP8.34□□□□□ -1.07
HDAC9-213ENST00000433709 IRAK1P51617 712 aa8.34□□□□□ -1.07
HDAC9-213ENST00000433709 HK2P52789 917 aa8.34□□□□□ -1.07
HDAC9-213ENST00000433709 MRM1Q6IN84 353 aaKnown RBP8.34□□□□□ -1.07
HDAC9-213ENST00000433709 ZPBP2Q6X784 338 aa8.34□□□□□ -1.07
HDAC9-213ENST00000433709 ZNF513Q8N8E2 541 aaPredicted RBP8.34□□□□□ -1.07
HDAC9-213ENST00000433709 FBXO41Q8TF61 875 aa8.34□□□□□ -1.07
HDAC9-213ENST00000433709 CTNND2Q9UQB3 1225 aa8.34□□□□□ -1.07
HDAC9-213ENST00000433709 MIA2Q96PC5 1412 aa8.34□□□□□ -1.07
HDAC9-213ENST00000433709 TIAM1Q13009 1591 aa8.34□□□□□ -1.07
HDAC9-213ENST00000433709 FAM135AQ9P2D6 1515 aa8.34□□□□□ -1.08
HDAC9-213ENST00000433709 ABCA6Q8N139 1617 aa8.33□□□□□ -1.08
HDAC9-213ENST00000433709 KIDINS220Q9ULH0 1771 aa8.33□□□□□ -1.08
HDAC9-213ENST00000433709 A0A087WZG4 1122 aa8.33□□□□□ -1.08
HDAC9-213ENST00000433709 TMEM82A0PJX8 343 aa8.33□□□□□ -1.08
HDAC9-213ENST00000433709 PPM1BO75688 479 aa8.33□□□□□ -1.08
HDAC9-213ENST00000433709 GSNP06396 782 aa8.33□□□□□ -1.08
HDAC9-213ENST00000433709 VAV1P15498 845 aa8.33□□□□□ -1.08
HDAC9-213ENST00000433709 BMP8BP34820 402 aa8.33□□□□□ -1.08
HDAC9-213ENST00000433709 RAB33AQ14088 237 aa8.33□□□□□ -1.08
HDAC9-213ENST00000433709 SF3A1Q15459 793 aaKnown RBP8.33□□□□□ -1.08
HDAC9-213ENST00000433709 DDR2Q16832 855 aa8.33□□□□□ -1.08
HDAC9-213ENST00000433709 CKAP2LQ8IYA6 745 aa8.33□□□□□ -1.08
HDAC9-213ENST00000433709 SREK1Q8WXA9 508 aaKnown RBP8.33□□□□□ -1.08
HDAC9-213ENST00000433709 ZDHHC15Q96MV8 337 aa8.33□□□□□ -1.08
HDAC9-213ENST00000433709 EBF1Q9UH73 591 aa8.33□□□□□ -1.08
HDAC9-213ENST00000433709 TMEM59LQ9UK28 342 aa8.33□□□□□ -1.08
HDAC9-213ENST00000433709 ZNF281Q9Y2X9 895 aa8.33□□□□□ -1.08
HDAC9-213ENST00000433709 DHX29Q7Z478 1369 aaKnown RBP8.33□□□□□ -1.08
HDAC9-213ENST00000433709 CCDC141Q6ZP82 1450 aa8.32□□□□□ -1.08
HDAC9-213ENST00000433709 LRRC9Q6ZRR7 1453 aa8.32□□□□□ -1.08
HDAC9-213ENST00000433709 LOC105371045A0A1W2PR82 267 aa8.32□□□□□ -1.08
HDAC9-213ENST00000433709 ZGLP1P0C6A0 271 aa8.32□□□□□ -1.08
HDAC9-213ENST00000433709 CWF19L1Q69YN2 538 aaKnown RBP8.32□□□□□ -1.08
HDAC9-213ENST00000433709 GGT6Q6P531 493 aa8.32□□□□□ -1.08
HDAC9-213ENST00000433709 WAPLQ7Z5K2 1190 aa8.32□□□□□ -1.08
HDAC9-213ENST00000433709 APBA2Q99767 749 aa8.32□□□□□ -1.08
HDAC9-213ENST00000433709 TRIM55Q9BYV6 548 aa8.32□□□□□ -1.08
HDAC9-213ENST00000433709 DIS3Q9Y2L1 958 aaKnown RBP8.32□□□□□ -1.08
HDAC9-213ENST00000433709 SUGT1Q9Y2Z0 365 aa8.32□□□□□ -1.08
HDAC9-213ENST00000433709 SF3B6Q9Y3B4 125 aaKnown RBP8.32□□□□□ -1.08
HDAC9-213ENST00000433709 ADGBQ8N7X0 1667 aa8.32□□□□□ -1.08
HDAC9-213ENST00000433709 PREX1Q8TCU6 1659 aa8.32□□□□□ -1.08
HDAC9-213ENST00000433709 ZMYM3Q14202 1370 aa8.32□□□□□ -1.08
HDAC9-213ENST00000433709 MBD5Q9P267 1494 aa8.32□□□□□ -1.08
HDAC9-213ENST00000433709 INO80Q9ULG1 1556 aaPredicted RBP8.31□□□□□ -1.08
HDAC9-213ENST00000433709 ZNF205O95201 554 aa8.31□□□□□ -1.08
HDAC9-213ENST00000433709 CEBPAP49715 358 aaPredicted RBP8.31□□□□□ -1.08
HDAC9-213ENST00000433709 ERVFC1P60507 584 aa8.31□□□□□ -1.08
HDAC9-213ENST00000433709 ARHGEF39Q8N4T4 335 aa8.31□□□□□ -1.08
HDAC9-213ENST00000433709 G6PC3Q9BUM1 346 aa8.31□□□□□ -1.08
HDAC9-213ENST00000433709 LGR4Q9BXB1 951 aa8.31□□□□□ -1.08
HDAC9-213ENST00000433709 SLC12A9Q9BXP2 914 aa8.31□□□□□ -1.08
HDAC9-213ENST00000433709 CGGBP1Q9UFW8 167 aaPredicted RBP8.31□□□□□ -1.08
HDAC9-213ENST00000433709 MROH2AA6NES4 1674 aa8.3□□□□□ -1.08
HDAC9-213ENST00000433709 SUSD5O60279 629 aa8.3□□□□□ -1.08
HDAC9-213ENST00000433709 VAMP4O75379 141 aa8.3□□□□□ -1.08
HDAC9-213ENST00000433709 GDNFP39905 211 aa8.3□□□□□ -1.08
HDAC9-213ENST00000433709 ZNF143P52747 638 aaPredicted RBP8.3□□□□□ -1.08
HDAC9-213ENST00000433709 HSPA2P54652 639 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms