RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 TRIM34Q9BYJ4 488 aa16.52■□□□□ 0.23
DDX56-205ENST00000433257 VPS16Q9H269 839 aa16.52■□□□□ 0.23
DDX56-205ENST00000433257 TAB2Q9NYJ8 693 aa16.52■□□□□ 0.23
DDX56-205ENST00000433257 TACC3Q9Y6A5 838 aa16.52■□□□□ 0.23
DDX56-205ENST00000433257 V9GY48 417 aaPredicted RBP16.52■□□□□ 0.23
DDX56-205ENST00000433257 USO1O60763 962 aaKnown RBP16.51■□□□□ 0.23
DDX56-205ENST00000433257 SCG2P13521 617 aa16.51■□□□□ 0.23
DDX56-205ENST00000433257 NLRP5P59047 1200 aa16.51■□□□□ 0.23
DDX56-205ENST00000433257 ZNF174Q15697 407 aa16.51■□□□□ 0.23
DDX56-205ENST00000433257 SLC10A5Q5PT55 438 aa16.51■□□□□ 0.23
DDX56-205ENST00000433257 C2CD5Q86YS7 1000 aa16.51■□□□□ 0.23
DDX56-205ENST00000433257 JAKMIP2Q96AA8 810 aa16.51■□□□□ 0.23
DDX56-205ENST00000433257 GUCA1BQ9UMX6 200 aa16.51■□□□□ 0.23
DDX56-205ENST00000433257 DCAF8L1A6NGE4 600 aa16.5■□□□□ 0.23
DDX56-205ENST00000433257 RNF40O75150 1001 aa16.5■□□□□ 0.23
DDX56-205ENST00000433257 DPEP1P16444 411 aa16.5■□□□□ 0.23
DDX56-205ENST00000433257 GNAQP50148 359 aa16.5■□□□□ 0.23
DDX56-205ENST00000433257 ZBED6P86452 979 aa16.5■□□□□ 0.23
DDX56-205ENST00000433257 TROAPQ12815 778 aa16.5■□□□□ 0.23
DDX56-205ENST00000433257 PFKFB3Q16875 520 aaPredicted RBP16.5■□□□□ 0.23
DDX56-205ENST00000433257 DNAJC21Q5F1R6 531 aaKnown RBP16.5■□□□□ 0.23
DDX56-205ENST00000433257 ARHGAP27Q6ZUM4 889 aa16.5■□□□□ 0.23
DDX56-205ENST00000433257 ZNF572Q7Z3I7 529 aaPredicted RBP16.5■□□□□ 0.23
DDX56-205ENST00000433257 CCDC82Q8N4S0 544 aa16.5■□□□□ 0.23
DDX56-205ENST00000433257 TRIM58Q8NG06 486 aa16.5■□□□□ 0.23
DDX56-205ENST00000433257 FAM204AQ9H8W3 233 aa16.5■□□□□ 0.23
DDX56-205ENST00000433257 INCENPQ9NQS7 918 aa16.5■□□□□ 0.23
DDX56-205ENST00000433257 EXOC1Q9NV70 894 aa16.5■□□□□ 0.23
DDX56-205ENST00000433257 HPCAL4Q9UM19 191 aa16.5■□□□□ 0.23
DDX56-205ENST00000433257 CNTNAP5Q8WYK1 1306 aa16.5■□□□□ 0.23
DDX56-205ENST00000433257 NRXN2Q9P2S2 1712 aa16.5■□□□□ 0.23
DDX56-205ENST00000433257 GOLGA8KD6RF30 607 aa16.5■□□□□ 0.23
DDX56-205ENST00000433257 PRKAB2O43741 272 aa16.5■□□□□ 0.23
DDX56-205ENST00000433257 OPA1O60313 960 aa16.5■□□□□ 0.23
DDX56-205ENST00000433257 RHOBTB3O94955 611 aa16.5■□□□□ 0.23
DDX56-205ENST00000433257 SRGNP10124 158 aa16.5■□□□□ 0.23
DDX56-205ENST00000433257 PRPHP41219 470 aa16.5■□□□□ 0.23
DDX56-205ENST00000433257 CORO7P57737 925 aa16.5■□□□□ 0.23
DDX56-205ENST00000433257 COBLL1Q53SF7 1204 aa16.5■□□□□ 0.23
DDX56-205ENST00000433257 C10orf67Q8IYJ2 551 aa16.5■□□□□ 0.23
DDX56-205ENST00000433257 MMGT1Q8N4V1 131 aa16.5■□□□□ 0.23
DDX56-205ENST00000433257 ZNF507Q8TCN5 953 aa16.5■□□□□ 0.23
DDX56-205ENST00000433257 AK8Q96MA6 479 aa16.5■□□□□ 0.23
DDX56-205ENST00000433257 CCSER1Q9C0I3 900 aa16.5■□□□□ 0.23
DDX56-205ENST00000433257 PIM2Q9P1W9 311 aa16.5■□□□□ 0.23
DDX56-205ENST00000433257 LAMB1P07942 1786 aa16.49■□□□□ 0.23
DDX56-205ENST00000433257 ZNF804BA4D1E1 1349 aa16.49■□□□□ 0.23
DDX56-205ENST00000433257 ABCB11O95342 1321 aa16.49■□□□□ 0.23
DDX56-205ENST00000433257 MINDY4BA8MYZ0 360 aa16.49■□□□□ 0.23
DDX56-205ENST00000433257 SHOX2O60902 331 aaPredicted RBP16.49■□□□□ 0.23
DDX56-205ENST00000433257 FGFR1OPO95684 399 aaKnown RBP16.49■□□□□ 0.23
DDX56-205ENST00000433257 CHRNA5P30532 468 aa16.49■□□□□ 0.23
DDX56-205ENST00000433257 KIF5AQ12840 1032 aa16.49■□□□□ 0.23
DDX56-205ENST00000433257 ORC2Q13416 577 aaPredicted RBP16.49■□□□□ 0.23
DDX56-205ENST00000433257 SYNE4Q8N205 404 aa16.49■□□□□ 0.23
DDX56-205ENST00000433257 NOA1Q8NC60 698 aaKnown RBP16.49■□□□□ 0.23
DDX56-205ENST00000433257 CAGE1Q8TC20 777 aa16.49■□□□□ 0.23
DDX56-205ENST00000433257 IPO4Q8TEX9 1081 aaKnown RBP16.49■□□□□ 0.23
DDX56-205ENST00000433257 ZNF622Q969S3 477 aaKnown RBP eCLIP16.49■□□□□ 0.238e-7■■■□□ 14.9
DDX56-205ENST00000433257 PURBQ96QR8 312 aaKnown RBP16.49■□□□□ 0.23
DDX56-205ENST00000433257 DISC1Q9NRI5 854 aa16.49■□□□□ 0.23
DDX56-205ENST00000433257 FAM184BQ9ULE4 1060 aa16.49■□□□□ 0.23
DDX56-205ENST00000433257 TTC26A0AVF1 554 aa16.48■□□□□ 0.23
DDX56-205ENST00000433257 LRRIQ3A6PVS8 624 aaPredicted RBP16.48■□□□□ 0.23
DDX56-205ENST00000433257 ZBTB22O15209 634 aa16.48■□□□□ 0.23
DDX56-205ENST00000433257 TACC1O75410 805 aa16.48■□□□□ 0.23
DDX56-205ENST00000433257 PRPF6O94906 941 aaKnown RBP16.48■□□□□ 0.23
DDX56-205ENST00000433257 CPP00450 1065 aa16.48■□□□□ 0.23
DDX56-205ENST00000433257 APBA1Q02410 837 aa16.48■□□□□ 0.23
DDX56-205ENST00000433257 SPA17Q15506 151 aa16.48■□□□□ 0.23
DDX56-205ENST00000433257 TTC31Q49AM3 519 aaPredicted RBP16.48■□□□□ 0.23
DDX56-205ENST00000433257 FKBP15Q5T1M5 1219 aa16.48■□□□□ 0.23
DDX56-205ENST00000433257 DTHD1Q6ZMT9 781 aa16.48■□□□□ 0.23
DDX56-205ENST00000433257 SPATS2Q86XZ4 545 aaKnown RBP16.48■□□□□ 0.23
DDX56-205ENST00000433257 SMYD4Q8IYR2 804 aaPredicted RBP16.48■□□□□ 0.23
DDX56-205ENST00000433257 DAGLBQ8NCG7 672 aa16.48■□□□□ 0.23
DDX56-205ENST00000433257 GIMAP8Q8ND71 665 aaPredicted RBP16.48■□□□□ 0.23
DDX56-205ENST00000433257 FAM76AQ8TAV0 307 aa16.48■□□□□ 0.23
DDX56-205ENST00000433257 MASTLQ96GX5 879 aa16.48■□□□□ 0.23
DDX56-205ENST00000433257 RNF14Q9UBS8 474 aa16.48■□□□□ 0.23
DDX56-205ENST00000433257 RSPH14Q9UHP6 348 aa16.48■□□□□ 0.23
DDX56-205ENST00000433257 JRKLQ9Y4A0 524 aa16.48■□□□□ 0.23
DDX56-205ENST00000433257 KLRG2A4D1S0 409 aaPredicted RBP16.47■□□□□ 0.23
DDX56-205ENST00000433257 TNFRSF8P28908 595 aa16.47■□□□□ 0.23
DDX56-205ENST00000433257 PRCPP42785 496 aa16.47■□□□□ 0.23
DDX56-205ENST00000433257 VAV2P52735 878 aa16.47■□□□□ 0.23
DDX56-205ENST00000433257 GYS2P54840 703 aa16.47■□□□□ 0.23
DDX56-205ENST00000433257 AMPD3Q01432 767 aa16.47■□□□□ 0.23
DDX56-205ENST00000433257 PPFIA1Q13136 1202 aa16.47■□□□□ 0.23
DDX56-205ENST00000433257 NPY5RQ15761 445 aa16.47■□□□□ 0.23
DDX56-205ENST00000433257 NCAPH2Q6IBW4 605 aa16.47■□□□□ 0.23
DDX56-205ENST00000433257 LRRC31Q6UY01 552 aa16.47■□□□□ 0.23
DDX56-205ENST00000433257 BLIDQ8IZY5 108 aa16.47■□□□□ 0.23
DDX56-205ENST00000433257 RPGRQ92834 1020 aaKnown RBP16.47■□□□□ 0.23
DDX56-205ENST00000433257 TRIM47Q96LD4 638 aa16.47■□□□□ 0.23
DDX56-205ENST00000433257 TSKSQ9UJT2 592 aa16.47■□□□□ 0.23
DDX56-205ENST00000433257 A0A087WUV0 522 aaPredicted RBP16.46■□□□□ 0.23
DDX56-205ENST00000433257 NPR1P16066 1061 aa16.46■□□□□ 0.23
DDX56-205ENST00000433257 TCP1P17987 556 aaKnown RBP16.46■□□□□ 0.23
DDX56-205ENST00000433257 NNTQ13423 1086 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms