RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 TLK2Q86UE8 772 aa17.63■□□□□ 0.41
PRKDC-203ENST00000432581 SLC43A3Q8NBI5 491 aa17.63■□□□□ 0.41
PRKDC-203ENST00000432581 PPP1R12CQ9BZL4 782 aa17.63■□□□□ 0.41
PRKDC-203ENST00000432581 SPTBN5Q9NRC6 3674 aaKnown RBP17.62■□□□□ 0.41
PRKDC-203ENST00000432581 MX1P20591 662 aa17.62■□□□□ 0.41
PRKDC-203ENST00000432581 FSCN1Q16658 493 aaKnown RBP17.62■□□□□ 0.41
PRKDC-203ENST00000432581 IQSEC1Q6DN90 963 aa17.62■□□□□ 0.41
PRKDC-203ENST00000432581 CXCL17Q6UXB2 119 aa17.62■□□□□ 0.41
PRKDC-203ENST00000432581 ZNF365Q70YC5 407 aa17.62■□□□□ 0.41
PRKDC-203ENST00000432581 MTIF3Q9H2K0 278 aaKnown RBP17.62■□□□□ 0.41
PRKDC-203ENST00000432581 CYP39A1Q9NYL5 469 aa17.62■□□□□ 0.41
PRKDC-203ENST00000432581 PRR12Q9ULL5 1215 aa17.62■□□□□ 0.41
PRKDC-203ENST00000432581 Q9Y3F1 56 aa17.62■□□□□ 0.41
PRKDC-203ENST00000432581 ASTN1O14525 1302 aa17.62■□□□□ 0.41
PRKDC-203ENST00000432581 EYSQ5T1H1 3165 aa17.61■□□□□ 0.41
PRKDC-203ENST00000432581 OTUD7AQ8TE49 926 aaPredicted RBP17.61■□□□□ 0.41
PRKDC-203ENST00000432581 CHMP4CQ96CF2 233 aa17.61■□□□□ 0.41
PRKDC-203ENST00000432581 PBX4Q9BYU1 374 aa17.61■□□□□ 0.41
PRKDC-203ENST00000432581 IL23AQ9NPF7 189 aa17.61■□□□□ 0.41
PRKDC-203ENST00000432581 IL17RBQ9NRM6 502 aa17.61■□□□□ 0.41
PRKDC-203ENST00000432581 ANAPC4Q9UJX5 808 aa17.61■□□□□ 0.41
PRKDC-203ENST00000432581 CCPG1Q9ULG6 757 aa17.61■□□□□ 0.41
PRKDC-203ENST00000432581 PCDHB15Q9Y5E8 787 aa17.61■□□□□ 0.41
PRKDC-203ENST00000432581 FOXP2O15409 715 aa17.6■□□□□ 0.41
PRKDC-203ENST00000432581 DYNC1LI2O43237 492 aaPredicted RBP17.6■□□□□ 0.41
PRKDC-203ENST00000432581 RANBP6O60518 1105 aaKnown RBP17.6■□□□□ 0.41
PRKDC-203ENST00000432581 ICAM1P05362 532 aa17.6■□□□□ 0.41
PRKDC-203ENST00000432581 ACRP10323 421 aa17.6■□□□□ 0.41
PRKDC-203ENST00000432581 SMPD1P17405 629 aa17.6■□□□□ 0.41
PRKDC-203ENST00000432581 CYP2C18P33260 490 aa17.6■□□□□ 0.41
PRKDC-203ENST00000432581 NOVP48745 357 aa17.6■□□□□ 0.41
PRKDC-203ENST00000432581 CTDSPL2Q05D32 466 aa17.6■□□□□ 0.41
PRKDC-203ENST00000432581 ITGA7Q13683 1181 aa17.6■□□□□ 0.41
PRKDC-203ENST00000432581 MUM1L1Q5H9M0 696 aa17.6■□□□□ 0.41
PRKDC-203ENST00000432581 DCAF4Q8WV16 495 aa17.6■□□□□ 0.41
PRKDC-203ENST00000432581 HERVK_113Q902F9 699 aa17.6■□□□□ 0.41
PRKDC-203ENST00000432581 GAS2L1Q99501 681 aaPredicted RBP17.6■□□□□ 0.41
PRKDC-203ENST00000432581 HIPK3Q9H422 1215 aa17.6■□□□□ 0.41
PRKDC-203ENST00000432581 VTA1Q9NP79 307 aa17.6■□□□□ 0.41
PRKDC-203ENST00000432581 ORC4O43929 436 aa17.59■□□□□ 0.41
PRKDC-203ENST00000432581 NMT2O60551 498 aa17.59■□□□□ 0.41
PRKDC-203ENST00000432581 SNAP25P60880 206 aa17.59■□□□□ 0.41
PRKDC-203ENST00000432581 RAB30Q15771 203 aa17.59■□□□□ 0.41
PRKDC-203ENST00000432581 CCDC96Q2M329 555 aa17.59■□□□□ 0.41
PRKDC-203ENST00000432581 TAPT1Q6NXT6 567 aa17.59■□□□□ 0.41
PRKDC-203ENST00000432581 NSMFQ6X4W1 530 aa17.59■□□□□ 0.41
PRKDC-203ENST00000432581 FBXO16Q8IX29 292 aaPredicted RBP17.59■□□□□ 0.41
PRKDC-203ENST00000432581 MORC4Q8TE76 937 aa17.59■□□□□ 0.41
PRKDC-203ENST00000432581 ZBTB47Q9UFB7 747 aaPredicted RBP17.59■□□□□ 0.41
PRKDC-203ENST00000432581 MSRAQ9UJ68 235 aa17.59■□□□□ 0.41
PRKDC-203ENST00000432581 LOC102724159A0A0B4J2E5 919 aa17.58■□□□□ 0.4
PRKDC-203ENST00000432581 GRXCR1A8MXD5 290 aa17.58■□□□□ 0.4
PRKDC-203ENST00000432581 FGBP02675 491 aa17.58■□□□□ 0.4
PRKDC-203ENST00000432581 PBX2P40425 430 aa17.58■□□□□ 0.4
PRKDC-203ENST00000432581 PWP2Q15269 919 aaKnown RBP17.58■□□□□ 0.4
PRKDC-203ENST00000432581 ALX1Q15699 326 aa17.58■□□□□ 0.4
PRKDC-203ENST00000432581 TJAP1Q5JTD0 557 aa17.58■□□□□ 0.4
PRKDC-203ENST00000432581 EEPD1Q7L9B9 569 aa17.58■□□□□ 0.4
PRKDC-203ENST00000432581 EVI5LQ96CN4 794 aa17.58■□□□□ 0.4
PRKDC-203ENST00000432581 RANBP17Q9H2T7 1088 aaKnown RBP17.58■□□□□ 0.4
PRKDC-203ENST00000432581 INCENPQ9NQS7 918 aa17.58■□□□□ 0.4
PRKDC-203ENST00000432581 PDGFCQ9NRA1 345 aa17.58■□□□□ 0.4
PRKDC-203ENST00000432581 ADD3Q9UEY8 706 aaKnown RBP17.58■□□□□ 0.4
PRKDC-203ENST00000432581 MTMR7Q9Y216 660 aa17.58■□□□□ 0.4
PRKDC-203ENST00000432581 PRUNE2Q8WUY3 3088 aa17.58■□□□□ 0.4
PRKDC-203ENST00000432581 MCM3APO60318 1980 aa17.57■□□□□ 0.4
PRKDC-203ENST00000432581 SALL3Q9BXA9 1300 aa17.57■□□□□ 0.4
PRKDC-203ENST00000432581 FGRP09769 529 aa17.57■□□□□ 0.4
PRKDC-203ENST00000432581 AKNAD1Q5T1N1 836 aa17.57■□□□□ 0.4
PRKDC-203ENST00000432581 BTNL9Q6UXG8 535 aa17.57■□□□□ 0.4
PRKDC-203ENST00000432581 KIAA1211Q6ZU35 1233 aa17.57■□□□□ 0.4
PRKDC-203ENST00000432581 USP38Q8NB14 1042 aa17.57■□□□□ 0.4
PRKDC-203ENST00000432581 NOC4LQ9BVI4 516 aaKnown RBP17.57■□□□□ 0.4
PRKDC-203ENST00000432581 HELLSQ9NRZ9 838 aa17.57■□□□□ 0.4
PRKDC-203ENST00000432581 PNMA2Q9UL42 364 aa17.57■□□□□ 0.4
PRKDC-203ENST00000432581 GRIN2DO15399 1336 aa17.56■□□□□ 0.4
PRKDC-203ENST00000432581 TOP1P11387 765 aaKnown RBP17.56■□□□□ 0.4
PRKDC-203ENST00000432581 DUSP28Q4G0W2 176 aa17.56■□□□□ 0.4
PRKDC-203ENST00000432581 VPS53Q5VIR6 699 aa17.56■□□□□ 0.4
PRKDC-203ENST00000432581 SYDE2Q5VT97 1194 aa17.56■□□□□ 0.4
PRKDC-203ENST00000432581 RASGRP2Q7LDG7 609 aa17.56■□□□□ 0.4
PRKDC-203ENST00000432581 TICAM2Q86XR7 235 aa17.56■□□□□ 0.4
PRKDC-203ENST00000432581 RPUSD2Q8IZ73 545 aaKnown RBP17.56■□□□□ 0.4
PRKDC-203ENST00000432581 TRPV6Q9H1D0 765 aa17.56■□□□□ 0.4
PRKDC-203ENST00000432581 DDX49Q9Y6V7 483 aaKnown RBP17.56■□□□□ 0.4
PRKDC-203ENST00000432581 B4GALT4O60513 344 aa17.55■□□□□ 0.4
PRKDC-203ENST00000432581 ALDH5A1P51649 535 aaPredicted RBP17.55■□□□□ 0.4
PRKDC-203ENST00000432581 BAATQ14032 418 aaPredicted RBP17.55■□□□□ 0.4
PRKDC-203ENST00000432581 WDR11Q9BZH6 1224 aa17.55■□□□□ 0.4
PRKDC-203ENST00000432581 PRDM12Q9H4Q4 367 aa17.55■□□□□ 0.4
PRKDC-203ENST00000432581 TOMM22Q9NS69 142 aa17.55■□□□□ 0.4
PRKDC-203ENST00000432581 TCP11L1Q9NUJ3 509 aa17.55■□□□□ 0.4
PRKDC-203ENST00000432581 POLR3EQ9NVU0 708 aa17.55■□□□□ 0.4
PRKDC-203ENST00000432581 CXXC1Q9P0U4 656 aaPredicted RBP17.55■□□□□ 0.4
PRKDC-203ENST00000432581 UMODL1Q5DID0 1318 aa17.54■□□□□ 0.4
PRKDC-203ENST00000432581 SUPT20HL2P0C7V6 817 aa17.54■□□□□ 0.4
PRKDC-203ENST00000432581 PTGS1P23219 599 aa17.54■□□□□ 0.4
PRKDC-203ENST00000432581 SLC16A2P36021 539 aa17.54■□□□□ 0.4
PRKDC-203ENST00000432581 CPT1AP50416 773 aa17.54■□□□□ 0.4
PRKDC-203ENST00000432581 CCL23P55773 120 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms