RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 RASA3Q14644 834 aa8.09□□□□□ -1.11
CNOT4-206ENST00000428680 DIXDC1Q155Q3 683 aa8.09□□□□□ -1.11
CNOT4-206ENST00000428680 COL13A1Q5TAT6 717 aaPredicted RBP8.09□□□□□ -1.11
CNOT4-206ENST00000428680 CAVIN1Q6NZI2 390 aaKnown RBP8.09□□□□□ -1.11
CNOT4-206ENST00000428680 DHX32Q7L7V1 743 aaKnown RBP8.09□□□□□ -1.11
CNOT4-206ENST00000428680 KRT25Q7Z3Z0 450 aa8.09□□□□□ -1.11
CNOT4-206ENST00000428680 KBTBD3Q8NAB2 608 aa8.09□□□□□ -1.11
CNOT4-206ENST00000428680 SLAIN1Q8ND83 568 aa8.09□□□□□ -1.11
CNOT4-206ENST00000428680 NACC1Q96RE7 527 aa8.09□□□□□ -1.11
CNOT4-206ENST00000428680 DNM3Q9UQ16 869 aa8.09□□□□□ -1.11
CNOT4-206ENST00000428680 AFMP43652 599 aa8.09□□□□□ -1.11
CNOT4-206ENST00000428680 ARHGAP29Q52LW3 1261 aa8.09□□□□□ -1.11
CNOT4-206ENST00000428680 FAM160B2Q86V87 743 aa8.09□□□□□ -1.11
CNOT4-206ENST00000428680 SDR42E1Q8WUS8 393 aa8.09□□□□□ -1.11
CNOT4-206ENST00000428680 TSNARE1Q96NA8 513 aa8.09□□□□□ -1.11
CNOT4-206ENST00000428680 UIMC1Q96RL1 719 aa8.09□□□□□ -1.11
CNOT4-206ENST00000428680 PALD1Q9ULE6 856 aa8.09□□□□□ -1.11
CNOT4-206ENST00000428680 INO80B-WBP1J3KQ70 363 aa8.09□□□□□ -1.12
CNOT4-206ENST00000428680 DAPK3O43293 454 aa8.09□□□□□ -1.12
CNOT4-206ENST00000428680 SDSP20132 328 aa8.09□□□□□ -1.12
CNOT4-206ENST00000428680 XPAP23025 273 aaPredicted RBP8.09□□□□□ -1.12
CNOT4-206ENST00000428680 STAT2P52630 851 aa8.09□□□□□ -1.12
CNOT4-206ENST00000428680 HSP90B2PQ58FF3 399 aa8.09□□□□□ -1.12
CNOT4-206ENST00000428680 FAM43BQ6ZT52 329 aaPredicted RBP8.09□□□□□ -1.12
CNOT4-206ENST00000428680 TICAM2Q86XR7 235 aa8.09□□□□□ -1.12
CNOT4-206ENST00000428680 TPH2Q8IWU9 490 aa8.09□□□□□ -1.12
CNOT4-206ENST00000428680 GSDMBQ8TAX9 411 aa8.09□□□□□ -1.12
CNOT4-206ENST00000428680 MED10Q9BTT4 135 aa8.09□□□□□ -1.12
CNOT4-206ENST00000428680 INO80BQ9C086 356 aaPredicted RBP8.09□□□□□ -1.12
CNOT4-206ENST00000428680 GBP3Q9H0R5 595 aa8.09□□□□□ -1.12
CNOT4-206ENST00000428680 ZBTB12Q9Y330 459 aaPredicted RBP8.09□□□□□ -1.12
CNOT4-206ENST00000428680 FRMPD2Q68DX3 1309 aaPredicted RBP8.09□□□□□ -1.12
CNOT4-206ENST00000428680 LRRIQ4A6NIV6 560 aa8.08□□□□□ -1.12
CNOT4-206ENST00000428680 UBE2Q2LH0YL09 131 aa8.08□□□□□ -1.12
CNOT4-206ENST00000428680 GH2P01242 217 aa8.08□□□□□ -1.12
CNOT4-206ENST00000428680 C6orf222P0C671 652 aaPredicted RBP8.08□□□□□ -1.12
CNOT4-206ENST00000428680 PHKA1P46020 1223 aa8.08□□□□□ -1.12
CNOT4-206ENST00000428680 METTL23Q86XA0 190 aa8.08□□□□□ -1.12
CNOT4-206ENST00000428680 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.08□□□□□ -1.12
CNOT4-206ENST00000428680 ATP6V0A1Q93050 837 aa8.08□□□□□ -1.12
CNOT4-206ENST00000428680 ARMC5Q96C12 935 aa8.08□□□□□ -1.12
CNOT4-206ENST00000428680 GLT1D1Q96MS3 346 aa8.08□□□□□ -1.12
CNOT4-206ENST00000428680 NUDT12Q9BQG2 462 aa8.08□□□□□ -1.12
CNOT4-206ENST00000428680 CD209Q9NNX6 404 aa8.08□□□□□ -1.12
CNOT4-206ENST00000428680 LMCD1Q9NZU5 365 aa8.08□□□□□ -1.12
CNOT4-206ENST00000428680 DENND3A2RUS2 1198 aa8.08□□□□□ -1.12
CNOT4-206ENST00000428680 DCDC2CA8MYV0 355 aa8.08□□□□□ -1.12
CNOT4-206ENST00000428680 SRGAP2BP0DMP2 458 aa8.08□□□□□ -1.12
CNOT4-206ENST00000428680 EEF2P13639 858 aaKnown RBP8.08□□□□□ -1.12
CNOT4-206ENST00000428680 PPARAQ07869 468 aa8.08□□□□□ -1.12
CNOT4-206ENST00000428680 SPDYE2Q495Y8 402 aa8.08□□□□□ -1.12
CNOT4-206ENST00000428680 ELMOD1Q8N336 334 aa8.08□□□□□ -1.12
CNOT4-206ENST00000428680 PNMA1Q8ND90 353 aa8.08□□□□□ -1.12
CNOT4-206ENST00000428680 TFIP11Q9UBB9 837 aaKnown RBP8.08□□□□□ -1.12
CNOT4-206ENST00000428680 TMCO5BA8MYB1 307 aa8.08□□□□□ -1.12
CNOT4-206ENST00000428680 CCNT1O60563 726 aaKnown RBP8.08□□□□□ -1.12
CNOT4-206ENST00000428680 TTLL1O95922 423 aa8.08□□□□□ -1.12
CNOT4-206ENST00000428680 FOSP01100 380 aaPredicted RBP8.08□□□□□ -1.12
CNOT4-206ENST00000428680 PDE6AP16499 860 aa8.08□□□□□ -1.12
CNOT4-206ENST00000428680 CTDSPL2Q05D32 466 aa8.08□□□□□ -1.12
CNOT4-206ENST00000428680 PPP2R5BQ15173 497 aa8.08□□□□□ -1.12
CNOT4-206ENST00000428680 CCDC184Q52MB2 194 aa8.08□□□□□ -1.12
CNOT4-206ENST00000428680 GPR153Q6NV75 609 aa8.08□□□□□ -1.12
CNOT4-206ENST00000428680 RSRC2Q7L4I2 434 aaKnown RBP8.08□□□□□ -1.12
CNOT4-206ENST00000428680 PLA2G4DQ86XP0 818 aa8.08□□□□□ -1.12
CNOT4-206ENST00000428680 STIM2Q9P246 746 aa8.08□□□□□ -1.12
CNOT4-206ENST00000428680 DNA2P51530 1060 aa8.07□□□□□ -1.12
CNOT4-206ENST00000428680 SP3Q02447 781 aa8.07□□□□□ -1.12
CNOT4-206ENST00000428680 RUFY4Q6ZNE9 571 aa8.07□□□□□ -1.12
CNOT4-206ENST00000428680 TAX1BP1Q86VP1 789 aa8.07□□□□□ -1.12
CNOT4-206ENST00000428680 PLIN2Q99541 437 aa8.07□□□□□ -1.12
CNOT4-206ENST00000428680 KLRF2D3W0D1 207 aa8.07□□□□□ -1.12
CNOT4-206ENST00000428680 PRPF4BQ13523 1007 aaKnown RBP8.07□□□□□ -1.12
CNOT4-206ENST00000428680 ARMCX5Q6P1M9 558 aa8.07□□□□□ -1.12
CNOT4-206ENST00000428680 USP17L2Q6R6M4 530 aa8.07□□□□□ -1.12
CNOT4-206ENST00000428680 SV2BQ7L1I2 683 aa8.07□□□□□ -1.12
CNOT4-206ENST00000428680 NLRP7Q8WX94 980 aa8.07□□□□□ -1.12
CNOT4-206ENST00000428680 ZBED3Q96IU2 234 aaPredicted RBP8.07□□□□□ -1.12
CNOT4-206ENST00000428680 OSBPL5Q9H0X9 879 aaPredicted RBP8.07□□□□□ -1.12
CNOT4-206ENST00000428680 H0YCG3 227 aa8.07□□□□□ -1.12
CNOT4-206ENST00000428680 USO1O60763 962 aaKnown RBP8.07□□□□□ -1.12
CNOT4-206ENST00000428680 RARBP10826 455 aa8.07□□□□□ -1.12
CNOT4-206ENST00000428680 LRRC24Q50LG9 513 aa8.07□□□□□ -1.12
CNOT4-206ENST00000428680 CEP135Q66GS9 1140 aa8.07□□□□□ -1.12
CNOT4-206ENST00000428680 SMIM5Q71RC9 77 aa8.07□□□□□ -1.12
CNOT4-206ENST00000428680 CELF1Q92879 486 aaKnown RBP8.07□□□□□ -1.12
CNOT4-206ENST00000428680 POLLQ9UGP5 575 aa8.07□□□□□ -1.12
CNOT4-206ENST00000428680 RBBP6Q7Z6E9 1792 aaKnown RBP8.07□□□□□ -1.12
CNOT4-206ENST00000428680 GJC1P36383 396 aa8.07□□□□□ -1.12
CNOT4-206ENST00000428680 TBC1D8BQ0IIM8 1120 aa8.07□□□□□ -1.12
CNOT4-206ENST00000428680 PRR16Q569H4 304 aa8.07□□□□□ -1.12
CNOT4-206ENST00000428680 FAM117BQ6P1L5 589 aa8.07□□□□□ -1.12
CNOT4-206ENST00000428680 CEP85Q6P2H3 762 aa8.07□□□□□ -1.12
CNOT4-206ENST00000428680 TMEM179Q6ZVK1 233 aa8.07□□□□□ -1.12
CNOT4-206ENST00000428680 EXOC4Q96A65 974 aa8.07□□□□□ -1.12
CNOT4-206ENST00000428680 IWS1Q96ST2 819 aa8.07□□□□□ -1.12
CNOT4-206ENST00000428680 MMP19Q99542 508 aa8.07□□□□□ -1.12
CNOT4-206ENST00000428680 NUP88Q99567 741 aaPredicted RBP8.07□□□□□ -1.12
CNOT4-206ENST00000428680 GPR108Q9NPR9 543 aa8.07□□□□□ -1.12
CNOT4-206ENST00000428680 GOLGA6L10A6NI86 522 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms