RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 KRT26Q7Z3Y9 468 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 RDH13Q8NBN7 331 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 SPDYE1Q8NFV5 336 aaPredicted RBP9.8□□□□□ -0.84
CTNND1-208ENST00000428599 HDAC11Q96DB2 347 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 A6NJR5 290 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 K7ENM7 598 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 PDE6AP16499 860 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 PDE6CP51160 858 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 CYP2J2P51589 502 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 POLGP54098 1239 aaPredicted RBP9.8□□□□□ -0.84
CTNND1-208ENST00000428599 EVCP57679 992 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 DMP1Q13316 513 aaPredicted RBP9.8□□□□□ -0.84
CTNND1-208ENST00000428599 PIGBQ92521 554 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 GCNAQ96QF7 691 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 TTC1Q99614 292 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 PPP1R12CQ9BZL4 782 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 SLC12A6Q9UHW9 1150 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 CDK12Q9NYV4 1490 aaPredicted RBP9.8□□□□□ -0.84
CTNND1-208ENST00000428599 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.8□□□□□ -0.84
CTNND1-208ENST00000428599 SMCO2A6NFE2 343 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 KIAA1841Q6NSI8 718 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.8□□□□□ -0.84
CTNND1-208ENST00000428599 ZNF804BA4D1E1 1349 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 ARHGEF37A1IGU5 675 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 XRCC5P13010 732 aaKnown RBP9.8□□□□□ -0.84
CTNND1-208ENST00000428599 IGBP1P78318 339 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 RAB44Q7Z6P3 723 aaPredicted RBP9.8□□□□□ -0.84
CTNND1-208ENST00000428599 GPBP1Q86WP2 473 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 UIMC1Q96RL1 719 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 DSCC1Q9BVC3 393 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 SPHKAPQ2M3C7 1700 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 USP17L12C9JPN9 530 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 USP17L21D6R901 530 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 SORBS3O60504 671 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 RASSF2P50749 326 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 RNASELQ05823 741 aaKnown RBP9.8□□□□□ -0.84
CTNND1-208ENST00000428599 PRR16Q569H4 304 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 EXOC8Q8IYI6 725 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 FAM71BQ8TC56 605 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 DDX27Q96GQ7 796 aaKnown RBP9.8□□□□□ -0.84
CTNND1-208ENST00000428599 ATP8B3O60423 1300 aa9.79□□□□□ -0.84
CTNND1-208ENST00000428599 F8W8V4 182 aa9.79□□□□□ -0.84
CTNND1-208ENST00000428599 NDUFAB1O14561 156 aa9.79□□□□□ -0.84
CTNND1-208ENST00000428599 STAT1P42224 750 aa9.79□□□□□ -0.84
CTNND1-208ENST00000428599 ERFEQ4G0M1 354 aa9.79□□□□□ -0.84
CTNND1-208ENST00000428599 CCDC93Q567U6 631 aa9.79□□□□□ -0.84
CTNND1-208ENST00000428599 HEG1Q9ULI3 1381 aa9.79□□□□□ -0.84
CTNND1-208ENST00000428599 BUB1BO60566 1050 aaPredicted RBP9.79□□□□□ -0.84
CTNND1-208ENST00000428599 TMCO4Q5TGY1 634 aa9.79□□□□□ -0.84
CTNND1-208ENST00000428599 U2AF1L4Q8WU68 220 aaKnown RBP9.79□□□□□ -0.84
CTNND1-208ENST00000428599 JPH2Q9BR39 696 aaPredicted RBP9.79□□□□□ -0.84
CTNND1-208ENST00000428599 LSM14BQ9BX40 385 aaKnown RBP9.79□□□□□ -0.84
CTNND1-208ENST00000428599 PUS3Q9BZE2 481 aaKnown RBP9.79□□□□□ -0.84
CTNND1-208ENST00000428599 PSTPIP2Q9H939 334 aa9.79□□□□□ -0.84
CTNND1-208ENST00000428599 RNF17Q9BXT8 1623 aaKnown RBP9.79□□□□□ -0.84
CTNND1-208ENST00000428599 E7EWF7 191 aa9.79□□□□□ -0.84
CTNND1-208ENST00000428599 RNF40O75150 1001 aa9.79□□□□□ -0.84
CTNND1-208ENST00000428599 PPFIA4O75335 1185 aa9.79□□□□□ -0.84
CTNND1-208ENST00000428599 ZSCAN20P17040 1043 aaPredicted RBP9.79□□□□□ -0.84
CTNND1-208ENST00000428599 PPFIA1Q13136 1202 aa9.79□□□□□ -0.84
CTNND1-208ENST00000428599 DBN1Q16643 649 aa9.79□□□□□ -0.84
CTNND1-208ENST00000428599 RSRC2Q7L4I2 434 aaKnown RBP9.79□□□□□ -0.84
CTNND1-208ENST00000428599 SDR42E1Q8WUS8 393 aa9.79□□□□□ -0.84
CTNND1-208ENST00000428599 PHKBQ93100 1093 aa9.79□□□□□ -0.84
CTNND1-208ENST00000428599 TAB2Q9NYJ8 693 aa9.79□□□□□ -0.84
CTNND1-208ENST00000428599 XDHP47989 1333 aa9.79□□□□□ -0.84
CTNND1-208ENST00000428599 ALKQ9UM73 1620 aa9.79□□□□□ -0.84
CTNND1-208ENST00000428599 IFNB1P01574 187 aa9.79□□□□□ -0.84
CTNND1-208ENST00000428599 CERKLQ49MI3 558 aaPredicted RBP9.79□□□□□ -0.84
CTNND1-208ENST00000428599 RETREG2Q8NC44 543 aa9.79□□□□□ -0.84
CTNND1-208ENST00000428599 CDKL2Q92772 493 aa9.79□□□□□ -0.84
CTNND1-208ENST00000428599 PSDA5PKW4 1024 aaPredicted RBP9.79□□□□□ -0.84
CTNND1-208ENST00000428599 PDE8BO95263 885 aa9.79□□□□□ -0.84
CTNND1-208ENST00000428599 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.79□□□□□ -0.845e-6■■■□□ 16.7
CTNND1-208ENST00000428599 ZKSCAN5Q9Y2L8 839 aa9.79□□□□□ -0.84
CTNND1-208ENST00000428599 PALLDQ8WX93 1383 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 STK25O00506 426 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 BTDP43251 543 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 ARMC9Q7Z3E5 817 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 MAP7D3Q8IWC1 876 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 APOL6Q9BWW8 343 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 IFT122Q9HBG6 1241 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 KDM2BQ8NHM5 1336 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 ARHGAP6O43182 974 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 ECE1P42892 770 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 IQCB1Q15051 598 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 FBXO11Q86XK2 927 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 SLC17A8Q8NDX2 589 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 AFF2P51816 1311 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 GLI2P10070 1586 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 SYNJ2BP-COX16A0A087WUM0 186 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 A0A1B0GUA9 196 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 RNF8O76064 485 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 STX2P32856 288 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 PHKA1P46020 1223 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 NLRP12P59046 1061 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 FANCCQ00597 558 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 POSTNQ15063 836 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 C1orf228Q6PIY5 440 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 COX16Q9P0S2 106 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms