RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 KIAA1217Q5T5P2 1943 aa13.8□□□□□ -0.2
RFC4-206ENST00000427785 SPDYE16A6NNV3 312 aaPredicted RBP13.8□□□□□ -0.2
RFC4-206ENST00000427785 USP17L15C9J2P7 530 aa13.8□□□□□ -0.2
RFC4-206ENST00000427785 USP17L13C9JLJ4 530 aa13.8□□□□□ -0.2
RFC4-206ENST00000427785 USP17L11C9JVI0 530 aa13.8□□□□□ -0.2
RFC4-206ENST00000427785 USP17L18D6R9N7 530 aa13.8□□□□□ -0.2
RFC4-206ENST00000427785 USP17L22D6RA61 530 aa13.8□□□□□ -0.2
RFC4-206ENST00000427785 USP17L17D6RBQ6 530 aa13.8□□□□□ -0.2
RFC4-206ENST00000427785 USP17L19D6RCP7 530 aa13.8□□□□□ -0.2
RFC4-206ENST00000427785 USP17L20D6RJB6 530 aa13.8□□□□□ -0.2
RFC4-206ENST00000427785 CXCL11O14625 94 aa13.8□□□□□ -0.2
RFC4-206ENST00000427785 KIF3CO14782 793 aa13.8□□□□□ -0.2
RFC4-206ENST00000427785 OPLAHO14841 1288 aa13.8□□□□□ -0.2
RFC4-206ENST00000427785 YEATS4O95619 227 aa13.8□□□□□ -0.2
RFC4-206ENST00000427785 ICAM1P05362 532 aa13.8□□□□□ -0.2
RFC4-206ENST00000427785 DSG3P32926 999 aa13.8□□□□□ -0.2
RFC4-206ENST00000427785 USP17L24Q0WX57 530 aa13.8□□□□□ -0.2
RFC4-206ENST00000427785 NONOQ15233 471 aaKnown RBP eCLIP13.8□□□□□ -0.2
RFC4-206ENST00000427785 TTC38Q5R3I4 469 aa13.8□□□□□ -0.2
RFC4-206ENST00000427785 CST9Q5W186 159 aa13.8□□□□□ -0.2
RFC4-206ENST00000427785 CATSPERGQ6ZRH7 1159 aa13.8□□□□□ -0.2
RFC4-206ENST00000427785 PROCA1Q8NCQ7 364 aaPredicted RBP13.8□□□□□ -0.2
RFC4-206ENST00000427785 PSTPIP2Q9H939 334 aa13.8□□□□□ -0.2
RFC4-206ENST00000427785 SLC38A10Q9HBR0 1119 aa13.8□□□□□ -0.2
RFC4-206ENST00000427785 ABCB11O95342 1321 aa13.8□□□□□ -0.2
RFC4-206ENST00000427785 ZNFX1Q9P2E3 1918 aaKnown RBP13.8□□□□□ -0.2
RFC4-206ENST00000427785 LRRC37A2A6NM11 1700 aa13.79□□□□□ -0.2
RFC4-206ENST00000427785 VWA5AO00534 786 aa13.79□□□□□ -0.2
RFC4-206ENST00000427785 ZBED4O75132 1171 aa13.79□□□□□ -0.2
RFC4-206ENST00000427785 CLK2P49760 499 aaKnown RBP13.79□□□□□ -0.2
RFC4-206ENST00000427785 SNAPC2Q13487 334 aa13.79□□□□□ -0.2
RFC4-206ENST00000427785 MOGSQ13724 837 aa13.79□□□□□ -0.2
RFC4-206ENST00000427785 PTPAQ15257 358 aa13.79□□□□□ -0.2
RFC4-206ENST00000427785 USP17L6PQ6QN14 398 aa13.79□□□□□ -0.2
RFC4-206ENST00000427785 LINC00301Q8NCQ3 95 aa13.79□□□□□ -0.2
RFC4-206ENST00000427785 REPS2Q8NFH8 660 aa13.79□□□□□ -0.2
RFC4-206ENST00000427785 GPT2Q8TD30 523 aa13.79□□□□□ -0.2
RFC4-206ENST00000427785 HOMER2Q9NSB8 354 aa13.79□□□□□ -0.2
RFC4-206ENST00000427785 AGTPBP1Q9UPW5 1226 aa13.79□□□□□ -0.2
RFC4-206ENST00000427785 PLXNA1Q9UIW2 1896 aa13.78□□□□□ -0.2
RFC4-206ENST00000427785 SPTLC2O15270 562 aa13.78□□□□□ -0.2
RFC4-206ENST00000427785 TRAK2O60296 914 aa13.78□□□□□ -0.2
RFC4-206ENST00000427785 ALAS1P13196 640 aa13.78□□□□□ -0.2
RFC4-206ENST00000427785 MARCKSP29966 332 aaPredicted RBP13.78□□□□□ -0.2
RFC4-206ENST00000427785 HOXA13P31271 388 aaPredicted RBP13.78□□□□□ -0.2
RFC4-206ENST00000427785 ME1P48163 572 aa13.78□□□□□ -0.2
RFC4-206ENST00000427785 MRPL12P52815 198 aaKnown RBP13.78□□□□□ -0.2
RFC4-206ENST00000427785 HUNKP57058 714 aa13.78□□□□□ -0.2
RFC4-206ENST00000427785 IRX3P78415 501 aaPredicted RBP13.78□□□□□ -0.2
RFC4-206ENST00000427785 ZNF174Q15697 407 aa13.78□□□□□ -0.2
RFC4-206ENST00000427785 TBCKQ8TEA7 893 aa13.78□□□□□ -0.2
RFC4-206ENST00000427785 ANO3Q9BYT9 981 aa13.78□□□□□ -0.2
RFC4-206ENST00000427785 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.78□□□□□ -0.2
RFC4-206ENST00000427785 RCOR1Q9UKL0 485 aa13.78□□□□□ -0.2
RFC4-206ENST00000427785 MRPL11Q9Y3B7 192 aaKnown RBP13.78□□□□□ -0.2
RFC4-206ENST00000427785 MRVI1Q9Y6F6 885 aa13.78□□□□□ -0.2
RFC4-206ENST00000427785 DDX49Q9Y6V7 483 aaKnown RBP13.78□□□□□ -0.2
RFC4-206ENST00000427785 MYPNQ86TC9 1320 aa13.78□□□□□ -0.2
RFC4-206ENST00000427785 PASKQ96RG2 1323 aa13.78□□□□□ -0.2
RFC4-206ENST00000427785 MCM3APO60318 1980 aa13.78□□□□□ -0.2
RFC4-206ENST00000427785 UNCXA6NJT0 531 aa13.77□□□□□ -0.21
RFC4-206ENST00000427785 NFIBO00712 420 aa13.77□□□□□ -0.21
RFC4-206ENST00000427785 MEIS2O14770 477 aa13.77□□□□□ -0.21
RFC4-206ENST00000427785 PEX10O60683 326 aa13.77□□□□□ -0.21
RFC4-206ENST00000427785 MCM7P33993 719 aa13.77□□□□□ -0.21
RFC4-206ENST00000427785 TRAPPC10P48553 1259 aa13.77□□□□□ -0.21
RFC4-206ENST00000427785 UBE2HP62256 183 aa13.77□□□□□ -0.21
RFC4-206ENST00000427785 TRAF1Q13077 416 aa13.77□□□□□ -0.21
RFC4-206ENST00000427785 COG2Q14746 738 aa13.77□□□□□ -0.21
RFC4-206ENST00000427785 SLC39A14Q15043 492 aa13.77□□□□□ -0.21
RFC4-206ENST00000427785 MUM1L1Q5H9M0 696 aa13.77□□□□□ -0.21
RFC4-206ENST00000427785 SNRNP48Q6IEG0 339 aaKnown RBP13.77□□□□□ -0.21
RFC4-206ENST00000427785 KCNG4Q8TDN1 519 aa13.77□□□□□ -0.21
RFC4-206ENST00000427785 P2RX7Q99572 595 aaKnown RBP13.77□□□□□ -0.21
RFC4-206ENST00000427785 GLT8D2Q9H1C3 349 aa13.77□□□□□ -0.21
RFC4-206ENST00000427785 ASCC2Q9H1I8 757 aaPredicted RBP13.77□□□□□ -0.21
RFC4-206ENST00000427785 DOCK5Q9H7D0 1870 aa13.77□□□□□ -0.21
RFC4-206ENST00000427785 CCL15-CCL14A0A0B4J2E2 113 aa13.76□□□□□ -0.21
RFC4-206ENST00000427785 MBD3O95983 291 aa13.76□□□□□ -0.21
RFC4-206ENST00000427785 CFBP00751 764 aa13.76□□□□□ -0.21
RFC4-206ENST00000427785 AP3B2Q13367 1082 aa13.76□□□□□ -0.21
RFC4-206ENST00000427785 PLS1Q14651 629 aa13.76□□□□□ -0.21
RFC4-206ENST00000427785 TMEM132BQ14DG7 1078 aa13.76□□□□□ -0.21
RFC4-206ENST00000427785 CCL15Q16663 113 aa13.76□□□□□ -0.21
RFC4-206ENST00000427785 LETM2Q2VYF4 491 aa13.76□□□□□ -0.21
RFC4-206ENST00000427785 SPRYD7Q5W111 196 aa13.76□□□□□ -0.21
RFC4-206ENST00000427785 GPAT2Q6NUI2 795 aa13.76□□□□□ -0.21
RFC4-206ENST00000427785 FASTKD5Q7L8L6 764 aaKnown RBP13.76□□□□□ -0.21
RFC4-206ENST00000427785 NEK8Q86SG6 692 aa13.76□□□□□ -0.21
RFC4-206ENST00000427785 RASAL3Q86YV0 1011 aa13.76□□□□□ -0.21
RFC4-206ENST00000427785 SMC1BQ8NDV3 1235 aa13.76□□□□□ -0.21
RFC4-206ENST00000427785 CLEC4DQ8WXI8 215 aa13.76□□□□□ -0.21
RFC4-206ENST00000427785 TBC1D5Q92609 795 aa13.76□□□□□ -0.21
RFC4-206ENST00000427785 RNF146Q9NTX7 359 aa13.76□□□□□ -0.21
RFC4-206ENST00000427785 ZNF214Q9UL59 606 aaPredicted RBP13.76□□□□□ -0.21
RFC4-206ENST00000427785 PCDHA7Q9UN72 937 aa13.76□□□□□ -0.21
RFC4-206ENST00000427785 GOLGA6L4A6NEF3 574 aa13.75□□□□□ -0.21
RFC4-206ENST00000427785 TDP2O95551 362 aa13.75□□□□□ -0.21
RFC4-206ENST00000427785 FDX1P10109 184 aa13.75□□□□□ -0.21
RFC4-206ENST00000427785 HOXA7P31268 230 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms