RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 DTHD1Q6ZMT9 781 aa8.33□□□□□ -1.08
LINC01108-201ENST00000427276 SPATA20Q8TB22 786 aa8.33□□□□□ -1.08
LINC01108-201ENST00000427276 CNOT6LQ96LI5 555 aaKnown RBP8.33□□□□□ -1.08
LINC01108-201ENST00000427276 ZIM3Q96PE6 472 aa8.33□□□□□ -1.08
LINC01108-201ENST00000427276 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.33□□□□□ -1.08
LINC01108-201ENST00000427276 MYH10P35580 1976 aa8.33□□□□□ -1.08
LINC01108-201ENST00000427276 AFDNP55196 1824 aaKnown RBP8.33□□□□□ -1.08
LINC01108-201ENST00000427276 FTCDO95954 541 aa8.33□□□□□ -1.08
LINC01108-201ENST00000427276 EIF4A3P38919 411 aaKnown RBP8.33□□□□□ -1.08
LINC01108-201ENST00000427276 CARSP49589 748 aaKnown RBP8.33□□□□□ -1.08
LINC01108-201ENST00000427276 DNM2P50570 870 aa8.33□□□□□ -1.08
LINC01108-201ENST00000427276 DYNLL1P63167 89 aaKnown RBP8.33□□□□□ -1.08
LINC01108-201ENST00000427276 GRIPAP1Q4V328 841 aa8.33□□□□□ -1.08
LINC01108-201ENST00000427276 AMOTL1Q8IY63 956 aa8.33□□□□□ -1.08
LINC01108-201ENST00000427276 ENAHQ8N8S7 591 aaPredicted RBP8.33□□□□□ -1.08
LINC01108-201ENST00000427276 ZBTB38Q8NAP3 1195 aaPredicted RBP8.33□□□□□ -1.08
LINC01108-201ENST00000427276 SHISA4Q96DD7 197 aa8.33□□□□□ -1.08
LINC01108-201ENST00000427276 RPGRIP1Q96KN7 1286 aa8.33□□□□□ -1.08
LINC01108-201ENST00000427276 RNF26Q9BY78 433 aaPredicted RBP8.33□□□□□ -1.08
LINC01108-201ENST00000427276 SLC39A2Q9NP94 309 aa8.33□□□□□ -1.08
LINC01108-201ENST00000427276 ADAMTS3O15072 1205 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 HEXIM1O94992 359 aaKnown RBP8.32□□□□□ -1.08
LINC01108-201ENST00000427276 BMP15O95972 392 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 TTMPQ5BVD1 217 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 B4GALNT4Q76KP1 1039 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 DYMQ7RTS9 669 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 CABS1Q96KC9 395 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 RNPC3Q96LT9 517 aaKnown RBP8.32□□□□□ -1.08
LINC01108-201ENST00000427276 OSBPL9Q96SU4 736 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 KRT12Q99456 494 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 PRDM11Q9NQV5 511 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 RBM12Q9NTZ6 932 aaKnown RBP8.32□□□□□ -1.08
LINC01108-201ENST00000427276 PCCAP05165 728 aaPredicted RBP8.32□□□□□ -1.08
LINC01108-201ENST00000427276 FCER1AP12319 257 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 CTSWP56202 376 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 EVA1CP58658 441 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 SF3B2Q13435 895 aaKnown RBP8.32□□□□□ -1.08
LINC01108-201ENST00000427276 PUM3Q15397 648 aaKnown RBP8.32□□□□□ -1.08
LINC01108-201ENST00000427276 PKN1Q16512 942 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 INF2Q27J81 1249 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 PAPD7Q5XG87 772 aaKnown RBP8.32□□□□□ -1.08
LINC01108-201ENST00000427276 SH3RF1Q7Z6J0 888 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 IRF2BP1Q8IU81 584 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 KIRREL3Q8IZU9 778 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 TRIM58Q8NG06 486 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 ZSCAN10Q96SZ4 725 aaPredicted RBP8.32□□□□□ -1.08
LINC01108-201ENST00000427276 YY1AP1Q9H869 796 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 VAT1LQ9HCJ6 419 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 TMOD3Q9NYL9 352 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 STIM2Q9P246 746 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 ASAP1Q9ULH1 1129 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 CAPN11Q9UMQ6 739 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 SNX12Q9UMY4 172 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 PCDHA13Q9Y5I0 950 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 MRC1P22897 1456 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 MAGEB6P1A0A0J9YX57 407 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 TSPY2A6NKD2 308 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 RPSAP08865 295 aaKnown RBP8.32□□□□□ -1.08
LINC01108-201ENST00000427276 FAM153BP0C7A2 387 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 EPHB4P54760 987 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 EVX2Q03828 476 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 FAM153CQ494X1 144 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 CC2D2BQ6DHV5 1058 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 HEATR3Q7Z4Q2 680 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 ELOA2Q8IYF1 753 aaPredicted RBP8.32□□□□□ -1.08
LINC01108-201ENST00000427276 BANK1Q8NDB2 785 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 OR2W6PQ8NHA6 318 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 LPIN2Q92539 896 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 PHF20Q9BVI0 1012 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 KANSL2Q9H9L4 492 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 FAM153AQ9UHL3 310 aa8.32□□□□□ -1.08
LINC01108-201ENST00000427276 NFAT5O94916 1531 aa8.31□□□□□ -1.08
LINC01108-201ENST00000427276 TARSL2A2RTX5 802 aaKnown RBP8.31□□□□□ -1.08
LINC01108-201ENST00000427276 SMIM23A6NLE4 172 aa8.31□□□□□ -1.08
LINC01108-201ENST00000427276 NKRFO15226 690 aaKnown RBP eCLIP8.31□□□□□ -1.08
LINC01108-201ENST00000427276 NF2P35240 595 aa8.31□□□□□ -1.08
LINC01108-201ENST00000427276 PDE6BP35913 854 aa8.31□□□□□ -1.08
LINC01108-201ENST00000427276 KIF11P52732 1056 aa8.31□□□□□ -1.08
LINC01108-201ENST00000427276 HDLBPQ00341 1268 aaKnown RBP8.31□□□□□ -1.08
LINC01108-201ENST00000427276 GFPT1Q06210 699 aaPredicted RBP8.31□□□□□ -1.08
LINC01108-201ENST00000427276 LETM2Q2VYF4 491 aa8.31□□□□□ -1.08
LINC01108-201ENST00000427276 KCNV1Q6PIU1 500 aa8.31□□□□□ -1.08
LINC01108-201ENST00000427276 CCDC121Q6ZUS5 278 aa8.31□□□□□ -1.08
LINC01108-201ENST00000427276 MICALCLQ6ZW33 695 aa8.31□□□□□ -1.08
LINC01108-201ENST00000427276 ZHX3Q9H4I2 956 aa8.31□□□□□ -1.08
LINC01108-201ENST00000427276 HYOU1Q9Y4L1 999 aa8.31□□□□□ -1.08
LINC01108-201ENST00000427276 MEGF6O75095 1541 aa8.31□□□□□ -1.08
LINC01108-201ENST00000427276 USP17L12C9JPN9 530 aa8.31□□□□□ -1.08
LINC01108-201ENST00000427276 USP17L21D6R901 530 aa8.31□□□□□ -1.08
LINC01108-201ENST00000427276 CCDC172P0C7W6 258 aa8.31□□□□□ -1.08
LINC01108-201ENST00000427276 NR1D1P20393 614 aa8.31□□□□□ -1.08
LINC01108-201ENST00000427276 ZBED6P86452 979 aa8.31□□□□□ -1.08
LINC01108-201ENST00000427276 ATP2C1P98194 919 aaPredicted RBP8.31□□□□□ -1.08
LINC01108-201ENST00000427276 EHHADHQ08426 723 aa8.31□□□□□ -1.08
LINC01108-201ENST00000427276 TRADDQ15628 312 aa8.31□□□□□ -1.08
LINC01108-201ENST00000427276 IL17AQ16552 155 aa8.31□□□□□ -1.08
LINC01108-201ENST00000427276 ANKRD40Q6AI12 368 aa8.31□□□□□ -1.08
LINC01108-201ENST00000427276 CREG2Q8IUH2 290 aa8.31□□□□□ -1.08
LINC01108-201ENST00000427276 SRBD1Q8N5C6 995 aaKnown RBP8.31□□□□□ -1.08
LINC01108-201ENST00000427276 CCDC155Q8N6L0 562 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms