RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 KRTAP4-8A0A0G2JLE6 195 aa3.74□□□□□ -1.81
PTPRC-208ENST00000427110 WTIPA6NIX2 430 aaPredicted RBP3.74□□□□□ -1.81
PTPRC-208ENST00000427110 B2RBV5 119 aa3.74□□□□□ -1.81
PTPRC-208ENST00000427110 SMAD7O15105 426 aaKnown RBP3.74□□□□□ -1.81
PTPRC-208ENST00000427110 FGF10O15520 208 aaPredicted RBP3.74□□□□□ -1.81
PTPRC-208ENST00000427110 MED14OSP0DP75 135 aa3.74□□□□□ -1.81
PTPRC-208ENST00000427110 PNLIPP16233 465 aa3.74□□□□□ -1.81
PTPRC-208ENST00000427110 GLDCP23378 1020 aa3.74□□□□□ -1.81
PTPRC-208ENST00000427110 ETFBP38117 255 aa3.74□□□□□ -1.81
PTPRC-208ENST00000427110 LINC00310P59036 64 aa3.74□□□□□ -1.81
PTPRC-208ENST00000427110 CYP4F8P98187 520 aa3.74□□□□□ -1.81
PTPRC-208ENST00000427110 MVKQ03426 396 aa3.74□□□□□ -1.81
PTPRC-208ENST00000427110 SSPNQ14714 243 aa3.74□□□□□ -1.81
PTPRC-208ENST00000427110 TNNI3KQ59H18 835 aa3.74□□□□□ -1.81
PTPRC-208ENST00000427110 VHLLQ6RSH7 139 aa3.74□□□□□ -1.81
PTPRC-208ENST00000427110 JAMLQ86YT9 394 aa3.74□□□□□ -1.81
PTPRC-208ENST00000427110 C19orf47Q8N9M1 422 aaKnown RBP3.74□□□□□ -1.81
PTPRC-208ENST00000427110 BHLHE22Q8NFJ8 381 aaPredicted RBP3.74□□□□□ -1.81
PTPRC-208ENST00000427110 OR6P1Q8NGX9 317 aa3.74□□□□□ -1.81
PTPRC-208ENST00000427110 TOX2Q96NM4 488 aa3.74□□□□□ -1.81
PTPRC-208ENST00000427110 HIRIP3Q9BW71 556 aaPredicted RBP3.74□□□□□ -1.81
PTPRC-208ENST00000427110 TRIM55Q9BYV6 548 aa3.74□□□□□ -1.81
PTPRC-208ENST00000427110 IRF2BPLQ9H1B7 796 aa3.74□□□□□ -1.81
PTPRC-208ENST00000427110 PHAXQ9H814 394 aaKnown RBP3.74□□□□□ -1.81
PTPRC-208ENST00000427110 RXFP1Q9HBX9 757 aa3.74□□□□□ -1.81
PTPRC-208ENST00000427110 CRTAC1Q9NQ79 661 aa3.74□□□□□ -1.81
PTPRC-208ENST00000427110 CGGBP1Q9UFW8 167 aaPredicted RBP3.74□□□□□ -1.81
PTPRC-208ENST00000427110 PLA2G2DQ9UNK4 145 aa3.74□□□□□ -1.81
PTPRC-208ENST00000427110 SUGT1Q9Y2Z0 365 aa3.74□□□□□ -1.81
PTPRC-208ENST00000427110 SF3B6Q9Y3B4 125 aaKnown RBP3.74□□□□□ -1.81
PTPRC-208ENST00000427110 SLC12A7Q9Y666 1083 aa3.74□□□□□ -1.81
PTPRC-208ENST00000427110 A0A1W2PQ45 241 aaPredicted RBP3.73□□□□□ -1.81
PTPRC-208ENST00000427110 A0A1W2PQY0 241 aa3.73□□□□□ -1.81
PTPRC-208ENST00000427110 U2SURPO15042 1029 aaKnown RBP3.73□□□□□ -1.81
PTPRC-208ENST00000427110 NUAK1O60285 661 aa3.73□□□□□ -1.81
PTPRC-208ENST00000427110 PEX10O60683 326 aa3.73□□□□□ -1.81
PTPRC-208ENST00000427110 ZSCAN22P10073 491 aaPredicted RBP3.73□□□□□ -1.81
PTPRC-208ENST00000427110 NCKAP1LP55160 1127 aa3.73□□□□□ -1.81
PTPRC-208ENST00000427110 CASP7P55210 303 aa3.73□□□□□ -1.81
PTPRC-208ENST00000427110 ERVFRD-1P60508 538 aa3.73□□□□□ -1.81
PTPRC-208ENST00000427110 POU4F1Q01851 419 aa3.73□□□□□ -1.81
PTPRC-208ENST00000427110 LAPTM5Q13571 262 aa3.73□□□□□ -1.81
PTPRC-208ENST00000427110 RAB3GAP1Q15042 981 aa3.73□□□□□ -1.81
PTPRC-208ENST00000427110 LCE4AQ5TA78 99 aa3.73□□□□□ -1.81
PTPRC-208ENST00000427110 LARP1BQ659C4 914 aaKnown RBP3.73□□□□□ -1.81
PTPRC-208ENST00000427110 ANKS3Q6ZW76 656 aa3.73□□□□□ -1.81
PTPRC-208ENST00000427110 TMC6Q7Z403 805 aa3.73□□□□□ -1.81
PTPRC-208ENST00000427110 PANK1Q8TE04 598 aa3.73□□□□□ -1.81
PTPRC-208ENST00000427110 HNRNPLLQ8WVV9 542 aaKnown RBP3.73□□□□□ -1.81
PTPRC-208ENST00000427110 PPP1R14AQ96A00 147 aa3.73□□□□□ -1.81
PTPRC-208ENST00000427110 ARMC5Q96C12 935 aa3.73□□□□□ -1.81
PTPRC-208ENST00000427110 PTCHD1Q96NR3 888 aa3.73□□□□□ -1.81
PTPRC-208ENST00000427110 GBP3Q9H0R5 595 aa3.73□□□□□ -1.81
PTPRC-208ENST00000427110 CNTD2Q9H8S5 307 aa3.73□□□□□ -1.81
PTPRC-208ENST00000427110 TNFRSF12AQ9NP84 129 aa3.73□□□□□ -1.81
PTPRC-208ENST00000427110 SIRT5Q9NXA8 310 aa3.73□□□□□ -1.81
PTPRC-208ENST00000427110 ACTR10Q9NZ32 417 aa3.73□□□□□ -1.81
PTPRC-208ENST00000427110 WHRNQ9P202 907 aa3.73□□□□□ -1.81
PTPRC-208ENST00000427110 KLHL14Q9P2G3 628 aa3.73□□□□□ -1.81
PTPRC-208ENST00000427110 FBLN5Q9UBX5 448 aa3.73□□□□□ -1.81
PTPRC-208ENST00000427110 MBD1Q9UIS9 605 aaPredicted RBP3.73□□□□□ -1.81
PTPRC-208ENST00000427110 ACSL6Q9UKU0 697 aa3.73□□□□□ -1.81
PTPRC-208ENST00000427110 TEX51A0A1B0GUA7 166 aa3.72□□□□□ -1.81
PTPRC-208ENST00000427110 A0A1W2PQ27 194 aa3.72□□□□□ -1.81
PTPRC-208ENST00000427110 A0A1W2PQ64 194 aa3.72□□□□□ -1.81
PTPRC-208ENST00000427110 A0A1W2PQC6 194 aa3.72□□□□□ -1.81
PTPRC-208ENST00000427110 A0A1W2PQD8 194 aa3.72□□□□□ -1.81
PTPRC-208ENST00000427110 AURKAO14965 403 aa3.72□□□□□ -1.81
PTPRC-208ENST00000427110 TBX1O43435 398 aa3.72□□□□□ -1.81
PTPRC-208ENST00000427110 SEMA7AO75326 666 aa3.72□□□□□ -1.81
PTPRC-208ENST00000427110 PPM1BO75688 479 aa3.72□□□□□ -1.81
PTPRC-208ENST00000427110 KCNH1O95259 989 aa3.72□□□□□ -1.81
PTPRC-208ENST00000427110 PI3P19957 117 aa3.72□□□□□ -1.81
PTPRC-208ENST00000427110 ENDOUP21128 410 aaKnown RBP3.72□□□□□ -1.81
PTPRC-208ENST00000427110 ARL4AP40617 200 aa3.72□□□□□ -1.81
PTPRC-208ENST00000427110 NOP2P46087 812 aaKnown RBP3.72□□□□□ -1.81
PTPRC-208ENST00000427110 CDR1P51861 262 aa3.72□□□□□ -1.81
PTPRC-208ENST00000427110 HLA-DQA1Q5Y7H0 255 aa3.72□□□□□ -1.81
PTPRC-208ENST00000427110 BICRALQ6AI39 1079 aa3.72□□□□□ -1.81
PTPRC-208ENST00000427110 C6orf15Q6UXA7 325 aaPredicted RBP3.72□□□□□ -1.81
PTPRC-208ENST00000427110 RPTNQ6XPR3 784 aa3.72□□□□□ -1.81
PTPRC-208ENST00000427110 CPNE8Q86YQ8 564 aa3.72□□□□□ -1.81
PTPRC-208ENST00000427110 ZNF513Q8N8E2 541 aaPredicted RBP3.72□□□□□ -1.81
PTPRC-208ENST00000427110 MICAL1Q8TDZ2 1067 aa3.72□□□□□ -1.81
PTPRC-208ENST00000427110 BCAS3Q9H6U6 928 aa3.72□□□□□ -1.81
PTPRC-208ENST00000427110 PRKAG3Q9UGI9 489 aa3.72□□□□□ -1.81
PTPRC-208ENST00000427110 CNOT6Q9ULM6 557 aaKnown RBP3.72□□□□□ -1.81
PTPRC-208ENST00000427110 A0A087WZG4 1122 aa3.71□□□□□ -1.82
PTPRC-208ENST00000427110 CCDC85CA6NKD9 419 aa3.71□□□□□ -1.82
PTPRC-208ENST00000427110 MPOP05164 745 aa3.71□□□□□ -1.82
PTPRC-208ENST00000427110 SEPHS1P49903 392 aa3.71□□□□□ -1.82
PTPRC-208ENST00000427110 YBX1P67809 324 aaKnown RBP3.71□□□□□ -1.82
PTPRC-208ENST00000427110 ZNF200P98182 395 aaPredicted RBP3.71□□□□□ -1.82
PTPRC-208ENST00000427110 AMPD2Q01433 879 aa3.71□□□□□ -1.82
PTPRC-208ENST00000427110 PLEKHN1Q494U1 663 aaPredicted RBP3.71□□□□□ -1.82
PTPRC-208ENST00000427110 SOGA3Q5TF21 947 aa3.71□□□□□ -1.82
PTPRC-208ENST00000427110 MBLAC2Q68D91 279 aa3.71□□□□□ -1.82
PTPRC-208ENST00000427110 CIAPIN1Q6FI81 312 aa3.71□□□□□ -1.82
PTPRC-208ENST00000427110 CYP2R1Q6VVX0 501 aa3.71□□□□□ -1.82
PTPRC-208ENST00000427110 ARHGEF39Q8N4T4 335 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms