RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 TMEM39AQ9NV64 488 aa11.9□□□□□ -0.5
GACAT3-201ENST00000426539 TBX21Q9UL17 535 aa11.9□□□□□ -0.5
GACAT3-201ENST00000426539 ISY1Q9ULR0 285 aaKnown RBP11.9□□□□□ -0.5
GACAT3-201ENST00000426539 HAX1O00165 279 aa11.89□□□□□ -0.51
GACAT3-201ENST00000426539 FGAP02671 866 aa11.89□□□□□ -0.51
GACAT3-201ENST00000426539 ASGR1P07306 291 aa11.89□□□□□ -0.51
GACAT3-201ENST00000426539 C6orf222P0C671 652 aaPredicted RBP11.89□□□□□ -0.51
GACAT3-201ENST00000426539 ALAS1P13196 640 aa11.89□□□□□ -0.51
GACAT3-201ENST00000426539 RAG1P15918 1043 aa11.89□□□□□ -0.51
GACAT3-201ENST00000426539 SMAD3P84022 425 aaKnown RBP11.89□□□□□ -0.51
GACAT3-201ENST00000426539 IKQ13123 557 aaPredicted RBP11.89□□□□□ -0.51
GACAT3-201ENST00000426539 TKFCQ3LXA3 575 aa11.89□□□□□ -0.51
GACAT3-201ENST00000426539 PPP4R3BQ5MIZ7 849 aa11.89□□□□□ -0.51
GACAT3-201ENST00000426539 ZNF697Q5TEC3 545 aa11.89□□□□□ -0.51
GACAT3-201ENST00000426539 NUP133Q8WUM0 1156 aa11.89□□□□□ -0.51
GACAT3-201ENST00000426539 PURBQ96QR8 312 aaKnown RBP11.89□□□□□ -0.51
GACAT3-201ENST00000426539 TTYH1Q9H313 450 aaPredicted RBP11.89□□□□□ -0.51
GACAT3-201ENST00000426539 SEMA6BQ9H3T3 888 aa11.89□□□□□ -0.51
GACAT3-201ENST00000426539 CIZ1Q9ULV3 898 aaPredicted RBP11.89□□□□□ -0.51
GACAT3-201ENST00000426539 MTMR7Q9Y216 660 aa11.89□□□□□ -0.51
GACAT3-201ENST00000426539 GNEQ9Y223 722 aaKnown RBP11.89□□□□□ -0.51
GACAT3-201ENST00000426539 ELP1O95163 1332 aa11.88□□□□□ -0.51
GACAT3-201ENST00000426539 HSPD1P10809 573 aaKnown RBP11.88□□□□□ -0.51
GACAT3-201ENST00000426539 SLC16A2P36021 539 aa11.88□□□□□ -0.51
GACAT3-201ENST00000426539 BEX3Q00994 111 aa11.88□□□□□ -0.51
GACAT3-201ENST00000426539 FPGSQ05932 587 aa11.88□□□□□ -0.51
GACAT3-201ENST00000426539 NMIQ13287 307 aaPredicted RBP11.88□□□□□ -0.51
GACAT3-201ENST00000426539 MCMDC2Q4G0Z9 681 aa11.88□□□□□ -0.51
GACAT3-201ENST00000426539 TMEM63BQ5T3F8 832 aa11.88□□□□□ -0.51
GACAT3-201ENST00000426539 BTNL9Q6UXG8 535 aa11.88□□□□□ -0.51
GACAT3-201ENST00000426539 PCSK9Q8NBP7 692 aaKnown RBP11.88□□□□□ -0.51
GACAT3-201ENST00000426539 GLT1D1Q96MS3 346 aa11.88□□□□□ -0.51
GACAT3-201ENST00000426539 CDX2Q99626 313 aaPredicted RBP11.88□□□□□ -0.51
GACAT3-201ENST00000426539 TMEM47Q9BQJ4 181 aa11.88□□□□□ -0.51
GACAT3-201ENST00000426539 LNPKQ9C0E8 428 aa11.88□□□□□ -0.51
GACAT3-201ENST00000426539 TSPYL2Q9H2G4 693 aaPredicted RBP11.88□□□□□ -0.51
GACAT3-201ENST00000426539 RANBP17Q9H2T7 1088 aaKnown RBP11.88□□□□□ -0.51
GACAT3-201ENST00000426539 PDGFCQ9NRA1 345 aa11.88□□□□□ -0.51
GACAT3-201ENST00000426539 CYP39A1Q9NYL5 469 aa11.88□□□□□ -0.51
GACAT3-201ENST00000426539 ASB14A6NK59 587 aa11.87□□□□□ -0.51
GACAT3-201ENST00000426539 DCDC2CA8MYV0 355 aa11.87□□□□□ -0.51
GACAT3-201ENST00000426539 ARVCFO00192 962 aa11.87□□□□□ -0.51
GACAT3-201ENST00000426539 TIMP1P01033 207 aa11.87□□□□□ -0.51
GACAT3-201ENST00000426539 ICAM1P05362 532 aa11.87□□□□□ -0.51
GACAT3-201ENST00000426539 SMPD1P17405 629 aa11.87□□□□□ -0.51
GACAT3-201ENST00000426539 TNFAIP2Q03169 654 aa11.87□□□□□ -0.51
GACAT3-201ENST00000426539 CCDC96Q2M329 555 aa11.87□□□□□ -0.51
GACAT3-201ENST00000426539 GNASQ5JWF2 1037 aa11.87□□□□□ -0.51
GACAT3-201ENST00000426539 TAPT1Q6NXT6 567 aa11.87□□□□□ -0.51
GACAT3-201ENST00000426539 C16orf59Q7L2K0 433 aa11.87□□□□□ -0.51
GACAT3-201ENST00000426539 FAM126BQ8IXS8 530 aa11.87□□□□□ -0.51
GACAT3-201ENST00000426539 MORC4Q8TE76 937 aa11.87□□□□□ -0.51
GACAT3-201ENST00000426539 DCAF4Q8WV16 495 aa11.87□□□□□ -0.51
GACAT3-201ENST00000426539 RNPC3Q96LT9 517 aaKnown RBP11.87□□□□□ -0.51
GACAT3-201ENST00000426539 TCP11L1Q9NUJ3 509 aa11.87□□□□□ -0.51
GACAT3-201ENST00000426539 CCPG1Q9ULG6 757 aa11.87□□□□□ -0.51
GACAT3-201ENST00000426539 FRMPD2Q68DX3 1309 aaPredicted RBP11.86□□□□□ -0.51
GACAT3-201ENST00000426539 A0A0U1RQG5 324 aaPredicted RBP11.86□□□□□ -0.51
GACAT3-201ENST00000426539 NFIBO00712 420 aa11.86□□□□□ -0.51
GACAT3-201ENST00000426539 TOP1P11387 765 aaKnown RBP11.86□□□□□ -0.51
GACAT3-201ENST00000426539 HAND2P61296 217 aa11.86□□□□□ -0.51
GACAT3-201ENST00000426539 RRP12Q5JTH9 1297 aaKnown RBP11.86□□□□□ -0.51
GACAT3-201ENST00000426539 SYDE2Q5VT97 1194 aa11.86□□□□□ -0.51
GACAT3-201ENST00000426539 CXCL17Q6UXB2 119 aa11.86□□□□□ -0.51
GACAT3-201ENST00000426539 NSMFQ6X4W1 530 aa11.86□□□□□ -0.51
GACAT3-201ENST00000426539 EEPD1Q7L9B9 569 aa11.86□□□□□ -0.51
GACAT3-201ENST00000426539 TLK2Q86UE8 772 aa11.86□□□□□ -0.51
GACAT3-201ENST00000426539 TICAM2Q86XR7 235 aa11.86□□□□□ -0.51
GACAT3-201ENST00000426539 TBC1D10CQ8IV04 446 aa11.86□□□□□ -0.51
GACAT3-201ENST00000426539 FBXO16Q8IX29 292 aaPredicted RBP11.86□□□□□ -0.51
GACAT3-201ENST00000426539 SMC5Q8IY18 1101 aa11.86□□□□□ -0.51
GACAT3-201ENST00000426539 SLC43A3Q8NBI5 491 aa11.86□□□□□ -0.51
GACAT3-201ENST00000426539 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.86□□□□□ -0.51
GACAT3-201ENST00000426539 SPC25Q9HBM1 224 aa11.86□□□□□ -0.51
GACAT3-201ENST00000426539 TOMM22Q9NS69 142 aa11.86□□□□□ -0.51
GACAT3-201ENST00000426539 MCM3APO60318 1980 aa11.86□□□□□ -0.51
GACAT3-201ENST00000426539 GRIN2DO15399 1336 aa11.86□□□□□ -0.51
GACAT3-201ENST00000426539 ZMYM6O95789 1325 aa11.86□□□□□ -0.51
GACAT3-201ENST00000426539 CCDC171Q6TFL3 1326 aa11.86□□□□□ -0.51
GACAT3-201ENST00000426539 CD4P01730 458 aa11.85□□□□□ -0.51
GACAT3-201ENST00000426539 IGHDP01880 384 aa11.85□□□□□ -0.51
GACAT3-201ENST00000426539 PDHBP11177 359 aa11.85□□□□□ -0.51
GACAT3-201ENST00000426539 BAATQ14032 418 aaPredicted RBP11.85□□□□□ -0.51
GACAT3-201ENST00000426539 MFSD5Q6N075 450 aa11.85□□□□□ -0.51
GACAT3-201ENST00000426539 CLEC4DQ8WXI8 215 aa11.85□□□□□ -0.51
GACAT3-201ENST00000426539 MYLIPQ8WY64 445 aa11.85□□□□□ -0.51
GACAT3-201ENST00000426539 VTI1AQ96AJ9 217 aa11.85□□□□□ -0.51
GACAT3-201ENST00000426539 GPCPD1Q9NPB8 672 aa11.85□□□□□ -0.51
GACAT3-201ENST00000426539 MROH7Q68CQ1 1323 aa11.85□□□□□ -0.51
GACAT3-201ENST00000426539 LRRC37A2A6NM11 1700 aa11.84□□□□□ -0.51
GACAT3-201ENST00000426539 TRIM6-TRIM34B2RNG4 842 aa11.84□□□□□ -0.51
GACAT3-201ENST00000426539 DYNC1LI2O43237 492 aaPredicted RBP11.84□□□□□ -0.51
GACAT3-201ENST00000426539 SNHG28P0DPA3 235 aa11.84□□□□□ -0.51
GACAT3-201ENST00000426539 CSF2RAP15509 400 aa11.84□□□□□ -0.51
GACAT3-201ENST00000426539 SDSP20132 328 aa11.84□□□□□ -0.51
GACAT3-201ENST00000426539 ZNF543Q08ER8 600 aa11.84□□□□□ -0.51
GACAT3-201ENST00000426539 FSCN1Q16658 493 aaKnown RBP11.84□□□□□ -0.51
GACAT3-201ENST00000426539 TMEM240Q5SV17 173 aa11.84□□□□□ -0.51
GACAT3-201ENST00000426539 AKNAD1Q5T1N1 836 aa11.84□□□□□ -0.51
GACAT3-201ENST00000426539 RASIP1Q5U651 963 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms