RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 A0A0U1RQG5 324 aaPredicted RBP17.79■□□□□ 0.44
ATG4B-209ENST00000425239 ERC2O15083 957 aa17.79■□□□□ 0.44
ATG4B-209ENST00000425239 SMPD1P17405 629 aa17.79■□□□□ 0.44
ATG4B-209ENST00000425239 SNAP25P60880 206 aa17.79■□□□□ 0.44
ATG4B-209ENST00000425239 TNFAIP2Q03169 654 aa17.79■□□□□ 0.44
ATG4B-209ENST00000425239 LRRFIP1Q32MZ4 808 aaKnown RBP17.79■□□□□ 0.44
ATG4B-209ENST00000425239 TKFCQ3LXA3 575 aa17.79■□□□□ 0.44
ATG4B-209ENST00000425239 USP38Q8NB14 1042 aa17.79■□□□□ 0.44
ATG4B-209ENST00000425239 MORC4Q8TE76 937 aa17.79■□□□□ 0.44
ATG4B-209ENST00000425239 PURBQ96QR8 312 aaKnown RBP17.79■□□□□ 0.44
ATG4B-209ENST00000425239 PDGFCQ9NRA1 345 aa17.79■□□□□ 0.44
ATG4B-209ENST00000425239 PRR12Q9ULL5 1215 aa17.79■□□□□ 0.44
ATG4B-209ENST00000425239 CTDP1Q9Y5B0 961 aaPredicted RBP17.79■□□□□ 0.44
ATG4B-209ENST00000425239 GRXCR1A8MXD5 290 aa17.78■□□□□ 0.44
ATG4B-209ENST00000425239 FOSL2P15408 326 aa17.78■□□□□ 0.44
ATG4B-209ENST00000425239 PBX2P40425 430 aa17.78■□□□□ 0.44
ATG4B-209ENST00000425239 SLC1A4P43007 532 aa17.78■□□□□ 0.44
ATG4B-209ENST00000425239 CHMP4CQ96CF2 233 aa17.78■□□□□ 0.44
ATG4B-209ENST00000425239 FSD1Q9BTV5 496 aa17.78■□□□□ 0.44
ATG4B-209ENST00000425239 ZNF576Q9H609 170 aa17.78■□□□□ 0.44
ATG4B-209ENST00000425239 SPC25Q9HBM1 224 aa17.78■□□□□ 0.44
ATG4B-209ENST00000425239 CYP39A1Q9NYL5 469 aa17.78■□□□□ 0.44
ATG4B-209ENST00000425239 ASB14A6NK59 587 aa17.77■□□□□ 0.44
ATG4B-209ENST00000425239 SLC3A2P08195 630 aaKnown RBP17.77■□□□□ 0.44
ATG4B-209ENST00000425239 MX1P20591 662 aa17.77■□□□□ 0.44
ATG4B-209ENST00000425239 CXCL17Q6UXB2 119 aa17.77■□□□□ 0.44
ATG4B-209ENST00000425239 BTNL9Q6UXG8 535 aa17.77■□□□□ 0.44
ATG4B-209ENST00000425239 ZNF365Q70YC5 407 aa17.77■□□□□ 0.44
ATG4B-209ENST00000425239 PBX4Q9BYU1 374 aa17.77■□□□□ 0.44
ATG4B-209ENST00000425239 UMODL1Q5DID0 1318 aa17.76■□□□□ 0.43
ATG4B-209ENST00000425239 TTC28Q96AY4 2481 aa17.76■□□□□ 0.43
ATG4B-209ENST00000425239 ORC4O43929 436 aa17.76■□□□□ 0.43
ATG4B-209ENST00000425239 ACRP10323 421 aa17.76■□□□□ 0.43
ATG4B-209ENST00000425239 ALAS1P13196 640 aa17.76■□□□□ 0.43
ATG4B-209ENST00000425239 CYP2C18P33260 490 aa17.76■□□□□ 0.43
ATG4B-209ENST00000425239 PPIGQ13427 754 aaKnown RBP eCLIP17.76■□□□□ 0.431e-10■■□□□ 12.8
ATG4B-209ENST00000425239 ALX1Q15699 326 aa17.76■□□□□ 0.43
ATG4B-209ENST00000425239 IQSEC1Q6DN90 963 aa17.76■□□□□ 0.43
ATG4B-209ENST00000425239 VTI1AQ96AJ9 217 aa17.76■□□□□ 0.43
ATG4B-209ENST00000425239 CXXC1Q9P0U4 656 aaPredicted RBP17.76■□□□□ 0.43
ATG4B-209ENST00000425239 STX8Q9UNK0 236 aa17.76■□□□□ 0.43
ATG4B-209ENST00000425239 Q9Y3F1 56 aa17.76■□□□□ 0.43
ATG4B-209ENST00000425239 FSCN1Q16658 493 aaKnown RBP17.75■□□□□ 0.43
ATG4B-209ENST00000425239 TTBK2Q6IQ55 1244 aa17.75■□□□□ 0.43
ATG4B-209ENST00000425239 CCDC174Q6PII3 467 aa17.75■□□□□ 0.43
ATG4B-209ENST00000425239 TLK2Q86UE8 772 aa17.75■□□□□ 0.43
ATG4B-209ENST00000425239 TMEM199Q8N511 208 aa17.75■□□□□ 0.43
ATG4B-209ENST00000425239 TIFAQ96CG3 184 aa17.75■□□□□ 0.43
ATG4B-209ENST00000425239 PPP1R12CQ9BZL4 782 aa17.75■□□□□ 0.43
ATG4B-209ENST00000425239 RANBP17Q9H2T7 1088 aaKnown RBP17.75■□□□□ 0.43
ATG4B-209ENST00000425239 TRANK1O15050 2925 aa17.74■□□□□ 0.43
ATG4B-209ENST00000425239 TSPY2A6NKD2 308 aa17.74■□□□□ 0.43
ATG4B-209ENST00000425239 DYNC1LI2O43237 492 aaPredicted RBP17.74■□□□□ 0.43
ATG4B-209ENST00000425239 CABYRO75952 493 aa17.74■□□□□ 0.43
ATG4B-209ENST00000425239 FGAP02671 866 aa17.74■□□□□ 0.43
ATG4B-209ENST00000425239 ICAM1P05362 532 aa17.74■□□□□ 0.43
ATG4B-209ENST00000425239 ITGA7Q13683 1181 aa17.74■□□□□ 0.43
ATG4B-209ENST00000425239 PPP4R3BQ5MIZ7 849 aa17.74■□□□□ 0.43
ATG4B-209ENST00000425239 HERVK_113Q902F9 699 aa17.74■□□□□ 0.43
ATG4B-209ENST00000425239 IL23AQ9NPF7 189 aa17.74■□□□□ 0.43
ATG4B-209ENST00000425239 RBM47A0AV96 593 aaKnown RBP17.73■□□□□ 0.43
ATG4B-209ENST00000425239 EEPD1Q7L9B9 569 aa17.73■□□□□ 0.43
ATG4B-209ENST00000425239 FBXO16Q8IX29 292 aaPredicted RBP17.73■□□□□ 0.43
ATG4B-209ENST00000425239 NOC4LQ9BVI4 516 aaKnown RBP17.73■□□□□ 0.43
ATG4B-209ENST00000425239 TRPV6Q9H1D0 765 aa17.73■□□□□ 0.43
ATG4B-209ENST00000425239 WNT8AQ9H1J5 351 aa17.73■□□□□ 0.43
ATG4B-209ENST00000425239 HELLSQ9NRZ9 838 aa17.73■□□□□ 0.43
ATG4B-209ENST00000425239 TCP11L1Q9NUJ3 509 aa17.73■□□□□ 0.43
ATG4B-209ENST00000425239 TLR3O15455 904 aaKnown RBP17.72■□□□□ 0.43
ATG4B-209ENST00000425239 B4GALT4O60513 344 aa17.72■□□□□ 0.43
ATG4B-209ENST00000425239 RANBP6O60518 1105 aaKnown RBP17.72■□□□□ 0.43
ATG4B-209ENST00000425239 SLC16A2P36021 539 aa17.72■□□□□ 0.43
ATG4B-209ENST00000425239 PSMC6P62333 389 aa17.72■□□□□ 0.43
ATG4B-209ENST00000425239 IKQ13123 557 aaPredicted RBP17.72■□□□□ 0.43
ATG4B-209ENST00000425239 BAATQ14032 418 aaPredicted RBP17.72■□□□□ 0.43
ATG4B-209ENST00000425239 ADGRE1Q14246 886 aa17.72■□□□□ 0.43
ATG4B-209ENST00000425239 PSRC1Q6PGN9 363 aaPredicted RBP17.72■□□□□ 0.43
ATG4B-209ENST00000425239 DCAF4Q8WV16 495 aa17.72■□□□□ 0.43
ATG4B-209ENST00000425239 CLEC4DQ8WXI8 215 aa17.72■□□□□ 0.43
ATG4B-209ENST00000425239 EVI5LQ96CN4 794 aa17.72■□□□□ 0.43
ATG4B-209ENST00000425239 FAM227BQ96M60 508 aa17.72■□□□□ 0.43
ATG4B-209ENST00000425239 TMEM47Q9BQJ4 181 aa17.72■□□□□ 0.43
ATG4B-209ENST00000425239 SEZ6LQ9BYH1 1024 aa17.72■□□□□ 0.43
ATG4B-209ENST00000425239 VTA1Q9NP79 307 aa17.72■□□□□ 0.43
ATG4B-209ENST00000425239 CCPG1Q9ULG6 757 aa17.72■□□□□ 0.43
ATG4B-209ENST00000425239 GBF1Q92538 1859 aa17.71■□□□□ 0.43
ATG4B-209ENST00000425239 NFIBO00712 420 aa17.71■□□□□ 0.43
ATG4B-209ENST00000425239 PDE1AP54750 535 aa17.71■□□□□ 0.43
ATG4B-209ENST00000425239 DUSP28Q4G0W2 176 aa17.71■□□□□ 0.43
ATG4B-209ENST00000425239 NOL8Q76FK4 1167 aaKnown RBP17.71■□□□□ 0.43
ATG4B-209ENST00000425239 AP5M1Q9H0R1 490 aa17.71■□□□□ 0.43
ATG4B-209ENST00000425239 HIPK3Q9H422 1215 aa17.71■□□□□ 0.43
ATG4B-209ENST00000425239 PRDM6Q9NQX0 595 aa17.71■□□□□ 0.43
ATG4B-209ENST00000425239 MYO9BQ13459 2157 aa17.71■□□□□ 0.43
ATG4B-209ENST00000425239 A0A0D9SFI3 127 aa17.7■□□□□ 0.42
ATG4B-209ENST00000425239 FGBP02675 491 aa17.7■□□□□ 0.42
ATG4B-209ENST00000425239 SNHG28P0DPA3 235 aa17.7■□□□□ 0.42
ATG4B-209ENST00000425239 ALDH5A1P51649 535 aaPredicted RBP17.7■□□□□ 0.42
ATG4B-209ENST00000425239 ANKRD45Q5TZF3 282 aa17.7■□□□□ 0.42
ATG4B-209ENST00000425239 NSMFQ6X4W1 530 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms