RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 ADCY7P51828 1080 aa11.83□□□□□ -0.52
MDC1-205ENST00000425072 IRX3P78415 501 aaPredicted RBP11.83□□□□□ -0.52
MDC1-205ENST00000425072 TKFCQ3LXA3 575 aa11.83□□□□□ -0.52
MDC1-205ENST00000425072 SPRYD7Q5W111 196 aa11.83□□□□□ -0.52
MDC1-205ENST00000425072 RGMBQ6NW40 437 aa11.83□□□□□ -0.52
MDC1-205ENST00000425072 KRT25Q7Z3Z0 450 aa11.83□□□□□ -0.52
MDC1-205ENST00000425072 GTF3C2Q8WUA4 911 aaPredicted RBP11.83□□□□□ -0.52
MDC1-205ENST00000425072 HHIPL1Q96JK4 782 aa11.83□□□□□ -0.52
MDC1-205ENST00000425072 PNMA3Q9UL41 463 aa11.83□□□□□ -0.52
MDC1-205ENST00000425072 SLC45A1Q9Y2W3 748 aa11.83□□□□□ -0.52
MDC1-205ENST00000425072 PASKQ96RG2 1323 aa11.83□□□□□ -0.52
MDC1-205ENST00000425072 TCHHQ07283 1943 aa11.82□□□□□ -0.52
MDC1-205ENST00000425072 TMEM88BA6NKF7 163 aa11.82□□□□□ -0.52
MDC1-205ENST00000425072 DDX11L8A8MPP1 907 aa11.82□□□□□ -0.52
MDC1-205ENST00000425072 ATP2A1O14983 1001 aa11.82□□□□□ -0.52
MDC1-205ENST00000425072 MCM4P33991 863 aa11.82□□□□□ -0.52
MDC1-205ENST00000425072 MYSM1Q5VVJ2 828 aa11.82□□□□□ -0.52
MDC1-205ENST00000425072 CCDC174Q6PII3 467 aa11.82□□□□□ -0.52
MDC1-205ENST00000425072 SAPCD2Q86UD0 394 aa11.82□□□□□ -0.52
MDC1-205ENST00000425072 REXO1Q8N1G1 1221 aaKnown RBP11.82□□□□□ -0.52
MDC1-205ENST00000425072 TFIP11Q9UBB9 837 aaKnown RBP11.82□□□□□ -0.52
MDC1-205ENST00000425072 RCOR1Q9UKL0 485 aa11.82□□□□□ -0.52
MDC1-205ENST00000425072 CEP131Q9UPN4 1083 aa11.82□□□□□ -0.52
MDC1-205ENST00000425072 PDE4DIPQ5VU43 2346 aa11.82□□□□□ -0.52
MDC1-205ENST00000425072 MANSC4A6NHS7 340 aaPredicted RBP11.81□□□□□ -0.52
MDC1-205ENST00000425072 PPP1R11O60927 126 aaPredicted RBP11.81□□□□□ -0.52
MDC1-205ENST00000425072 BMP15O95972 392 aa11.81□□□□□ -0.52
MDC1-205ENST00000425072 STAT3P40763 770 aa11.81□□□□□ -0.52
MDC1-205ENST00000425072 SNAP25P60880 206 aa11.81□□□□□ -0.52
MDC1-205ENST00000425072 DNM1Q05193 864 aaKnown RBP11.81□□□□□ -0.52
MDC1-205ENST00000425072 NONOQ15233 471 aaKnown RBP eCLIP11.81□□□□□ -0.52
MDC1-205ENST00000425072 FOXD4L6Q3SYB3 417 aaPredicted RBP11.81□□□□□ -0.52
MDC1-205ENST00000425072 USH1GQ495M9 461 aa11.81□□□□□ -0.52
MDC1-205ENST00000425072 FOXD4L3Q6VB84 417 aaPredicted RBP11.81□□□□□ -0.52
MDC1-205ENST00000425072 LBX2Q6XYB7 198 aa11.81□□□□□ -0.52
MDC1-205ENST00000425072 CPXCR1Q8N123 301 aa11.81□□□□□ -0.52
MDC1-205ENST00000425072 MS4A4AQ96JQ5 239 aa11.81□□□□□ -0.52
MDC1-205ENST00000425072 P2RX7Q99572 595 aaKnown RBP11.81□□□□□ -0.52
MDC1-205ENST00000425072 NAP1L4Q99733 375 aaKnown RBP11.81□□□□□ -0.52
MDC1-205ENST00000425072 RTEL1Q9NZ71 1219 aa11.81□□□□□ -0.52
MDC1-205ENST00000425072 CCPG1Q9ULG6 757 aa11.81□□□□□ -0.52
MDC1-205ENST00000425072 PCDHA6Q9UN73 950 aa11.81□□□□□ -0.52
MDC1-205ENST00000425072 PCDHA8Q9Y5H6 950 aa11.81□□□□□ -0.52
MDC1-205ENST00000425072 TLL2Q9Y6L7 1015 aa11.81□□□□□ -0.52
MDC1-205ENST00000425072 CCL15-CCL14A0A0B4J2E2 113 aa11.8□□□□□ -0.52
MDC1-205ENST00000425072 GOLGA6L4A6NEF3 574 aa11.8□□□□□ -0.52
MDC1-205ENST00000425072 GCOM1H8Y6P7 765 aaPredicted RBP11.8□□□□□ -0.52
MDC1-205ENST00000425072 M0R2N6 131 aa11.8□□□□□ -0.52
MDC1-205ENST00000425072 PIK3CDO00329 1044 aa11.8□□□□□ -0.52
MDC1-205ENST00000425072 POLR2MP0CAP2 368 aa11.8□□□□□ -0.52
MDC1-205ENST00000425072 COPB2P35606 906 aa11.8□□□□□ -0.52
MDC1-205ENST00000425072 USP11P51784 963 aa11.8□□□□□ -0.52
MDC1-205ENST00000425072 NR5A1Q13285 461 aa11.8□□□□□ -0.52
MDC1-205ENST00000425072 SF3A1Q15459 793 aaKnown RBP11.8□□□□□ -0.52
MDC1-205ENST00000425072 NFKBIBQ15653 356 aa11.8□□□□□ -0.52
MDC1-205ENST00000425072 NPY5RQ15761 445 aa11.8□□□□□ -0.52
MDC1-205ENST00000425072 CCL15Q16663 113 aa11.8□□□□□ -0.52
MDC1-205ENST00000425072 SKOR2Q2VWA4 1001 aaPredicted RBP11.8□□□□□ -0.52
MDC1-205ENST00000425072 TREML2Q5T2D2 321 aa11.8□□□□□ -0.52
MDC1-205ENST00000425072 ANO1Q5XXA6 986 aa11.8□□□□□ -0.52
MDC1-205ENST00000425072 TYW1BQ6NUM6 668 aa11.8□□□□□ -0.52
MDC1-205ENST00000425072 ANKRD23Q86SG2 305 aa11.8□□□□□ -0.52
MDC1-205ENST00000425072 OXER1Q8TDS5 423 aa11.8□□□□□ -0.52
MDC1-205ENST00000425072 TNFRSF25Q93038 417 aa11.8□□□□□ -0.52
MDC1-205ENST00000425072 ATG4CQ96DT6 458 aa11.8□□□□□ -0.52
MDC1-205ENST00000425072 SPATA32Q96LK8 384 aa11.8□□□□□ -0.52
MDC1-205ENST00000425072 ASCC2Q9H1I8 757 aaPredicted RBP11.8□□□□□ -0.52
MDC1-205ENST00000425072 EHMT1Q9H9B1 1298 aa11.8□□□□□ -0.52
MDC1-205ENST00000425072 RAVER2Q9HCJ3 691 aaKnown RBP11.8□□□□□ -0.52
MDC1-205ENST00000425072 ZCCHC17Q9NP64 241 aaKnown RBP11.8□□□□□ -0.52
MDC1-205ENST00000425072 RTN4Q9NQC3 1192 aaKnown RBP11.8□□□□□ -0.52
MDC1-205ENST00000425072 POLR3EQ9NVU0 708 aa11.8□□□□□ -0.52
MDC1-205ENST00000425072 BIN2Q9UBW5 565 aaPredicted RBP11.8□□□□□ -0.52
MDC1-205ENST00000425072 TESPA1A2RU30 521 aaPredicted RBP11.79□□□□□ -0.52
MDC1-205ENST00000425072 SPDYE3A6NKU9 549 aa11.79□□□□□ -0.52
MDC1-205ENST00000425072 KIF28PB7ZC32 967 aa11.79□□□□□ -0.52
MDC1-205ENST00000425072 PRPF40AO75400 957 aaKnown RBP11.79□□□□□ -0.52
MDC1-205ENST00000425072 YEATS4O95619 227 aa11.79□□□□□ -0.52
MDC1-205ENST00000425072 SLC25A27O95847 323 aa11.79□□□□□ -0.52
MDC1-205ENST00000425072 ALAS1P13196 640 aa11.79□□□□□ -0.52
MDC1-205ENST00000425072 GJA5P36382 358 aa11.79□□□□□ -0.52
MDC1-205ENST00000425072 GCLCP48506 637 aaPredicted RBP11.79□□□□□ -0.52
MDC1-205ENST00000425072 AP3B2Q13367 1082 aa11.79□□□□□ -0.52
MDC1-205ENST00000425072 DGKZQ13574 1117 aa11.79□□□□□ -0.52
MDC1-205ENST00000425072 MOGSQ13724 837 aa11.79□□□□□ -0.52
MDC1-205ENST00000425072 STK38Q15208 465 aa11.79□□□□□ -0.52
MDC1-205ENST00000425072 GPAT2Q6NUI2 795 aa11.79□□□□□ -0.52
MDC1-205ENST00000425072 FAM173BQ6P4H8 233 aa11.79□□□□□ -0.52
MDC1-205ENST00000425072 PIK3AP1Q6ZUJ8 805 aa11.79□□□□□ -0.52
MDC1-205ENST00000425072 REM2Q8IYK8 340 aaPredicted RBP11.79□□□□□ -0.52
MDC1-205ENST00000425072 CHST13Q8NET6 341 aa11.79□□□□□ -0.52
MDC1-205ENST00000425072 KCNG4Q8TDN1 519 aa11.79□□□□□ -0.52
MDC1-205ENST00000425072 AGBL1Q96MI9 1066 aa11.79□□□□□ -0.52
MDC1-205ENST00000425072 TRERF1Q96PN7 1200 aa11.79□□□□□ -0.52
MDC1-205ENST00000425072 TEX13BQ9BXU2 312 aa11.79□□□□□ -0.52
MDC1-205ENST00000425072 FBXO40Q9UH90 709 aa11.79□□□□□ -0.52
MDC1-205ENST00000425072 ABT1Q9ULW3 272 aaKnown RBP11.79□□□□□ -0.52
MDC1-205ENST00000425072 RABGAP1Q9Y3P9 1069 aa11.79□□□□□ -0.52
MDC1-205ENST00000425072 OTOFQ9HC10 1997 aa11.79□□□□□ -0.52
MDC1-205ENST00000425072 ZNF536O15090 1300 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms