RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 FRMD5Q7Z6J6 570 aa8.52□□□□□ -1.05
LINC01040-201ENST00000425048 BRF1Q92994 677 aa8.52□□□□□ -1.05
LINC01040-201ENST00000425048 FERD3LQ96RJ6 166 aa8.52□□□□□ -1.05
LINC01040-201ENST00000425048 PDLIM7Q9NR12 457 aa8.52□□□□□ -1.05
LINC01040-201ENST00000425048 JAG2Q9Y219 1238 aa8.52□□□□□ -1.05
LINC01040-201ENST00000425048 SRGAP3O43295 1099 aa8.51□□□□□ -1.05
LINC01040-201ENST00000425048 TBC1D8O95759 1140 aa8.51□□□□□ -1.05
LINC01040-201ENST00000425048 DBHP09172 617 aa8.51□□□□□ -1.05
LINC01040-201ENST00000425048 KCNC1P48547 511 aa8.51□□□□□ -1.05
LINC01040-201ENST00000425048 AXDND1Q5T1B0 1012 aaPredicted RBP8.51□□□□□ -1.05
LINC01040-201ENST00000425048 BICRALQ6AI39 1079 aa8.51□□□□□ -1.05
LINC01040-201ENST00000425048 SF3B6Q9Y3B4 125 aaKnown RBP8.51□□□□□ -1.05
LINC01040-201ENST00000425048 FHOD1Q9Y613 1164 aa8.51□□□□□ -1.05
LINC01040-201ENST00000425048 FFAR3O14843 346 aa8.5□□□□□ -1.05
LINC01040-201ENST00000425048 TP53P04637 393 aaPredicted RBP8.5□□□□□ -1.05
LINC01040-201ENST00000425048 CD247P20963 164 aa8.5□□□□□ -1.05
LINC01040-201ENST00000425048 LIMS1P48059 325 aa8.5□□□□□ -1.05
LINC01040-201ENST00000425048 NLGN2Q8NFZ4 835 aa8.5□□□□□ -1.05
LINC01040-201ENST00000425048 FCRL3Q96P31 734 aaPredicted RBP8.5□□□□□ -1.05
LINC01040-201ENST00000425048 ADAM7Q9H2U9 754 aa8.5□□□□□ -1.05
LINC01040-201ENST00000425048 F8W031 263 aaPredicted RBP8.49□□□□□ -1.05
LINC01040-201ENST00000425048 CORO7P57737 925 aa8.49□□□□□ -1.05
LINC01040-201ENST00000425048 FOXO4P98177 505 aa8.49□□□□□ -1.05
LINC01040-201ENST00000425048 POU4F1Q01851 419 aa8.49□□□□□ -1.05
LINC01040-201ENST00000425048 PPFIBP1Q86W92 1011 aa8.49□□□□□ -1.05
LINC01040-201ENST00000425048 FIBCD1Q8N539 461 aa8.49□□□□□ -1.05
LINC01040-201ENST00000425048 A0A087WZG4 1122 aa8.48□□□□□ -1.05
LINC01040-201ENST00000425048 SLURP1P55000 103 aa8.48□□□□□ -1.05
LINC01040-201ENST00000425048 TCEAL1Q15170 157 aa8.48□□□□□ -1.05
LINC01040-201ENST00000425048 FBXW10Q5XX13 1052 aa8.48□□□□□ -1.05
LINC01040-201ENST00000425048 UNC5AQ6ZN44 842 aa8.48□□□□□ -1.05
LINC01040-201ENST00000425048 USP48Q86UV5 1035 aa8.48□□□□□ -1.05
LINC01040-201ENST00000425048 RBBP8NLQ8NC74 664 aaPredicted RBP8.48□□□□□ -1.05
LINC01040-201ENST00000425048 PTCHD1Q96NR3 888 aa8.48□□□□□ -1.05
LINC01040-201ENST00000425048 SUSD2Q9UGT4 822 aa8.48□□□□□ -1.05
LINC01040-201ENST00000425048 DBR1Q9UK59 544 aaKnown RBP8.48□□□□□ -1.05
LINC01040-201ENST00000425048 DIS3Q9Y2L1 958 aaKnown RBP8.48□□□□□ -1.05
LINC01040-201ENST00000425048 ZNF451Q9Y4E5 1061 aa8.48□□□□□ -1.05
LINC01040-201ENST00000425048 ITGA4P13612 1032 aa8.47□□□□□ -1.05
LINC01040-201ENST00000425048 GUCY2CP25092 1073 aa8.47□□□□□ -1.05
LINC01040-201ENST00000425048 ZNF76P36508 570 aa8.47□□□□□ -1.05
LINC01040-201ENST00000425048 PRR5P85299 388 aa8.47□□□□□ -1.05
LINC01040-201ENST00000425048 PLP2Q04941 152 aa8.47□□□□□ -1.05
LINC01040-201ENST00000425048 LDLRAD1Q5T700 205 aa8.47□□□□□ -1.05
LINC01040-201ENST00000425048 HCFC2Q9Y5Z7 792 aa8.47□□□□□ -1.05
LINC01040-201ENST00000425048 ADRB1P08588 477 aa8.46□□□□□ -1.06
LINC01040-201ENST00000425048 NCAM1P13591 858 aa8.46□□□□□ -1.06
LINC01040-201ENST00000425048 FBLN1P23142 703 aa8.46□□□□□ -1.06
LINC01040-201ENST00000425048 L1CAMP32004 1257 aa8.46□□□□□ -1.06
LINC01040-201ENST00000425048 ZYXQ15942 572 aaKnown RBP8.46□□□□□ -1.06
LINC01040-201ENST00000425048 FNIP1Q8TF40 1166 aa8.46□□□□□ -1.06
LINC01040-201ENST00000425048 RNF38Q9H0F5 515 aa8.46□□□□□ -1.06
LINC01040-201ENST00000425048 NOL6Q9H6R4 1146 aaKnown RBP8.46□□□□□ -1.06
LINC01040-201ENST00000425048 FAM86C1Q9NVL1 165 aa8.46□□□□□ -1.06
LINC01040-201ENST00000425048 FAN1Q9Y2M0 1017 aa8.46□□□□□ -1.06
LINC01040-201ENST00000425048 CD3EP07766 207 aa8.45□□□□□ -1.06
LINC01040-201ENST00000425048 ATF2P15336 505 aa8.45□□□□□ -1.06
LINC01040-201ENST00000425048 LSRQ86X29 649 aaPredicted RBP8.45□□□□□ -1.06
LINC01040-201ENST00000425048 RNF34Q969K3 372 aa8.45□□□□□ -1.06
LINC01040-201ENST00000425048 BORCS6Q96GS4 357 aa8.45□□□□□ -1.06
LINC01040-201ENST00000425048 ZNF214Q9UL59 606 aaPredicted RBP8.45□□□□□ -1.06
LINC01040-201ENST00000425048 PMF1-BGLAPU3KQ54 211 aa8.45□□□□□ -1.06
LINC01040-201ENST00000425048 IFNGR1P15260 489 aa8.44□□□□□ -1.06
LINC01040-201ENST00000425048 TACR1P25103 407 aa8.44□□□□□ -1.06
LINC01040-201ENST00000425048 NFKB2Q00653 900 aa8.44□□□□□ -1.06
LINC01040-201ENST00000425048 ZFYVE27Q5T4F4 411 aa8.44□□□□□ -1.06
LINC01040-201ENST00000425048 RUFY4Q6ZNE9 571 aa8.44□□□□□ -1.06
LINC01040-201ENST00000425048 ZDHHC15Q96MV8 337 aa8.44□□□□□ -1.06
LINC01040-201ENST00000425048 PLA2G1BP04054 148 aaKnown RBP8.43□□□□□ -1.06
LINC01040-201ENST00000425048 SPATS1Q496A3 300 aa8.43□□□□□ -1.06
LINC01040-201ENST00000425048 VWA3BQ502W6 1294 aa8.43□□□□□ -1.06
LINC01040-201ENST00000425048 BDH2Q9BUT1 245 aa8.43□□□□□ -1.06
LINC01040-201ENST00000425048 BACH2Q9BYV9 841 aa8.43□□□□□ -1.06
LINC01040-201ENST00000425048 PPT2Q9UMR5 302 aa8.43□□□□□ -1.06
LINC01040-201ENST00000425048 PRICKLE3O43900 615 aaPredicted RBP8.42□□□□□ -1.06
LINC01040-201ENST00000425048 KRTAP10-2P60368 255 aa8.42□□□□□ -1.06
LINC01040-201ENST00000425048 PPP2R5DQ14738 602 aa8.42□□□□□ -1.06
LINC01040-201ENST00000425048 RTP5Q14D33 572 aa8.42□□□□□ -1.06
LINC01040-201ENST00000425048 EEF1DP3Q658K8 133 aa8.42□□□□□ -1.06
LINC01040-201ENST00000425048 LIPIQ6XZB0 460 aa8.42□□□□□ -1.06
LINC01040-201ENST00000425048 SAPCD2Q86UD0 394 aa8.42□□□□□ -1.06
LINC01040-201ENST00000425048 GGNQ86UU5 652 aa8.42□□□□□ -1.06
LINC01040-201ENST00000425048 CRBNQ96SW2 442 aa8.42□□□□□ -1.06
LINC01040-201ENST00000425048 METTL5Q9NRN9 209 aaKnown RBP8.42□□□□□ -1.06
LINC01040-201ENST00000425048 USP40Q9NVE5 1235 aa8.42□□□□□ -1.06
LINC01040-201ENST00000425048 PLA2G2DQ9UNK4 145 aa8.42□□□□□ -1.06
LINC01040-201ENST00000425048 ASGR2P07307 311 aa8.41□□□□□ -1.06
LINC01040-201ENST00000425048 ZNF16P17020 682 aaPredicted RBP8.41□□□□□ -1.06
LINC01040-201ENST00000425048 HTRA3P83110 453 aa8.41□□□□□ -1.06
LINC01040-201ENST00000425048 EFEMP1Q12805 493 aa8.41□□□□□ -1.06
LINC01040-201ENST00000425048 ZNF394Q53GI3 561 aa8.41□□□□□ -1.06
LINC01040-201ENST00000425048 UBXN11Q5T124 520 aa8.41□□□□□ -1.06
LINC01040-201ENST00000425048 RCSD1Q6JBY9 416 aa8.41□□□□□ -1.06
LINC01040-201ENST00000425048 CABP7Q86V35 215 aa8.41□□□□□ -1.06
LINC01040-201ENST00000425048 ADGRG2Q8IZP9 1017 aa8.41□□□□□ -1.06
LINC01040-201ENST00000425048 ALG3Q92685 438 aa8.41□□□□□ -1.06
LINC01040-201ENST00000425048 WHRNQ9P202 907 aa8.41□□□□□ -1.06
LINC01040-201ENST00000425048 SLC12A7Q9Y666 1083 aa8.41□□□□□ -1.06
LINC01040-201ENST00000425048 LTBP3Q9NS15 1303 aa8.4□□□□□ -1.06
LINC01040-201ENST00000425048 A0A1B0GTL3 188 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms