RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 BORCS6Q96GS4 357 aa3.85□□□□□ -1.79
PMS1-209ENST00000424059 ZNF512BQ96KM6 892 aaPredicted RBP3.85□□□□□ -1.79
PMS1-209ENST00000424059 TEPSINQ96N21 525 aa3.85□□□□□ -1.79
PMS1-209ENST00000424059 SPON2Q9BUD6 331 aa3.85□□□□□ -1.79
PMS1-209ENST00000424059 DSCC1Q9BVC3 393 aa3.85□□□□□ -1.79
PMS1-209ENST00000424059 XYLT2Q9H1B5 865 aa3.85□□□□□ -1.79
PMS1-209ENST00000424059 USP35Q9P2H5 1018 aa3.85□□□□□ -1.79
PMS1-209ENST00000424059 PCDHA5Q9Y5H7 936 aa3.85□□□□□ -1.79
PMS1-209ENST00000424059 IRS2Q9Y4H2 1338 aa3.85□□□□□ -1.79
PMS1-209ENST00000424059 NOP2P46087 812 aaKnown RBP3.85□□□□□ -1.79
PMS1-209ENST00000424059 CEBPAP49715 358 aaPredicted RBP3.85□□□□□ -1.79
PMS1-209ENST00000424059 RTP2Q5QGT7 225 aa3.85□□□□□ -1.79
PMS1-209ENST00000424059 FAM129CQ86XR2 697 aa3.85□□□□□ -1.79
PMS1-209ENST00000424059 IGDCC3Q8IVU1 814 aa3.85□□□□□ -1.79
PMS1-209ENST00000424059 GIPC2Q8TF65 315 aa3.85□□□□□ -1.79
PMS1-209ENST00000424059 SLC9A7Q96T83 725 aa3.85□□□□□ -1.79
PMS1-209ENST00000424059 EPB41L4AQ9HCS5 686 aaPredicted RBP3.85□□□□□ -1.79
PMS1-209ENST00000424059 METTL5Q9NRN9 209 aaKnown RBP3.85□□□□□ -1.79
PMS1-209ENST00000424059 FHOD1Q9Y613 1164 aa3.85□□□□□ -1.79
PMS1-209ENST00000424059 A0A087WZG4 1122 aa3.84□□□□□ -1.79
PMS1-209ENST00000424059 PPM1GO15355 546 aaPredicted RBP3.84□□□□□ -1.79
PMS1-209ENST00000424059 CYBBP04839 570 aa3.84□□□□□ -1.79
PMS1-209ENST00000424059 COL9A2Q14055 689 aaPredicted RBP3.84□□□□□ -1.79
PMS1-209ENST00000424059 PLEKHN1Q494U1 663 aaPredicted RBP3.84□□□□□ -1.79
PMS1-209ENST00000424059 ZC3H14Q6PJT7 736 aaKnown RBP3.84□□□□□ -1.79
PMS1-209ENST00000424059 CRTC3Q6UUV7 619 aa3.84□□□□□ -1.79
PMS1-209ENST00000424059 DBX2Q6ZNG2 339 aa3.84□□□□□ -1.79
PMS1-209ENST00000424059 CCDC144CPQ8IYA2 1237 aa3.84□□□□□ -1.79
PMS1-209ENST00000424059 NAT16Q8N8M0 369 aa3.84□□□□□ -1.79
PMS1-209ENST00000424059 LINC01356Q8N9X3 169 aa3.84□□□□□ -1.79
PMS1-209ENST00000424059 PANK1Q8TE04 598 aa3.84□□□□□ -1.79
PMS1-209ENST00000424059 IMPACTQ9P2X3 320 aa3.84□□□□□ -1.79
PMS1-209ENST00000424059 CNOT11Q9UKZ1 510 aaKnown RBP3.84□□□□□ -1.79
PMS1-209ENST00000424059 SF3B6Q9Y3B4 125 aaKnown RBP3.84□□□□□ -1.79
PMS1-209ENST00000424059 A0A1W2PQ27 194 aa3.83□□□□□ -1.8
PMS1-209ENST00000424059 A0A1W2PQ64 194 aa3.83□□□□□ -1.8
PMS1-209ENST00000424059 A0A1W2PQC6 194 aa3.83□□□□□ -1.8
PMS1-209ENST00000424059 A0A1W2PQD8 194 aa3.83□□□□□ -1.8
PMS1-209ENST00000424059 PTMAP06454 111 aaKnown RBP3.83□□□□□ -1.8
PMS1-209ENST00000424059 PAQR3Q6TCH7 311 aa3.83□□□□□ -1.8
PMS1-209ENST00000424059 RPTNQ6XPR3 784 aa3.83□□□□□ -1.8
PMS1-209ENST00000424059 FRMD5Q7Z6J6 570 aa3.83□□□□□ -1.8
PMS1-209ENST00000424059 GPATCH11Q8N954 259 aa3.83□□□□□ -1.8
PMS1-209ENST00000424059 JMJD8Q96S16 334 aa3.83□□□□□ -1.8
PMS1-209ENST00000424059 SLC12A9Q9BXP2 914 aa3.83□□□□□ -1.8
PMS1-209ENST00000424059 RNF38Q9H0F5 515 aa3.83□□□□□ -1.8
PMS1-209ENST00000424059 AP5S1Q9NUS5 200 aa3.83□□□□□ -1.8
PMS1-209ENST00000424059 FGF10O15520 208 aaPredicted RBP3.83□□□□□ -1.8
PMS1-209ENST00000424059 GSTM1P09488 218 aa3.83□□□□□ -1.8
PMS1-209ENST00000424059 IGFBP6P24592 240 aaPredicted RBP3.83□□□□□ -1.8
PMS1-209ENST00000424059 JAMLQ86YT9 394 aa3.83□□□□□ -1.8
PMS1-209ENST00000424059 TMEM52Q8NDY8 209 aa3.83□□□□□ -1.8
PMS1-209ENST00000424059 NLGN2Q8NFZ4 835 aa3.83□□□□□ -1.8
PMS1-209ENST00000424059 GZF1Q9H116 711 aaPredicted RBP3.83□□□□□ -1.8
PMS1-209ENST00000424059 ANTXR1Q9H6X2 564 aa3.83□□□□□ -1.8
PMS1-209ENST00000424059 SLC12A7Q9Y666 1083 aa3.83□□□□□ -1.8
PMS1-209ENST00000424059 CADPSQ9ULU8 1353 aa3.82□□□□□ -1.8
PMS1-209ENST00000424059 NUDT19A8MXV4 375 aa3.82□□□□□ -1.8
PMS1-209ENST00000424059 MEIS1O00470 390 aa3.82□□□□□ -1.8
PMS1-209ENST00000424059 SHOXO15266 292 aa3.82□□□□□ -1.8
PMS1-209ENST00000424059 BUB1BO60566 1050 aaPredicted RBP3.82□□□□□ -1.8
PMS1-209ENST00000424059 ITGA4P13612 1032 aa3.82□□□□□ -1.8
PMS1-209ENST00000424059 MVKQ03426 396 aa3.82□□□□□ -1.8
PMS1-209ENST00000424059 RNF34Q969K3 372 aa3.82□□□□□ -1.8
PMS1-209ENST00000424059 SPATA32Q96LK8 384 aa3.82□□□□□ -1.8
PMS1-209ENST00000424059 FERD3LQ96RJ6 166 aa3.82□□□□□ -1.8
PMS1-209ENST00000424059 GP6Q9HCN6 339 aa3.82□□□□□ -1.8
PMS1-209ENST00000424059 PDLIM7Q9NR12 457 aa3.82□□□□□ -1.8
PMS1-209ENST00000424059 MINPP1Q9UNW1 487 aa3.82□□□□□ -1.8
PMS1-209ENST00000424059 OTOL1A6NHN0 477 aaPredicted RBP3.82□□□□□ -1.8
PMS1-209ENST00000424059 CELA3BP08861 270 aa3.82□□□□□ -1.8
PMS1-209ENST00000424059 ACRP10323 421 aa3.82□□□□□ -1.8
PMS1-209ENST00000424059 SDHBP21912 280 aa3.82□□□□□ -1.8
PMS1-209ENST00000424059 GUCY2CP25092 1073 aa3.82□□□□□ -1.8
PMS1-209ENST00000424059 ZNF76P36508 570 aa3.82□□□□□ -1.8
PMS1-209ENST00000424059 FAM193AP78312 1265 aa3.82□□□□□ -1.8
PMS1-209ENST00000424059 POU4F1Q01851 419 aa3.82□□□□□ -1.8
PMS1-209ENST00000424059 NOL9Q5SY16 702 aaKnown RBP3.82□□□□□ -1.8
PMS1-209ENST00000424059 EXOC8Q8IYI6 725 aa3.82□□□□□ -1.8
PMS1-209ENST00000424059 PWWP2AQ96N64 755 aa3.82□□□□□ -1.8
PMS1-209ENST00000424059 DIS3Q9Y2L1 958 aaKnown RBP3.82□□□□□ -1.8
PMS1-209ENST00000424059 A0A1W2PQJ5 194 aa3.81□□□□□ -1.8
PMS1-209ENST00000424059 TBC1D8O95759 1140 aa3.81□□□□□ -1.8
PMS1-209ENST00000424059 DBHP09172 617 aa3.81□□□□□ -1.8
PMS1-209ENST00000424059 FBLN1P23142 703 aa3.81□□□□□ -1.8
PMS1-209ENST00000424059 MFAP1P55081 439 aaKnown RBP3.81□□□□□ -1.8
PMS1-209ENST00000424059 TCEAL1Q15170 157 aa3.81□□□□□ -1.8
PMS1-209ENST00000424059 SPATS1Q496A3 300 aa3.81□□□□□ -1.8
PMS1-209ENST00000424059 RCSD1Q6JBY9 416 aa3.81□□□□□ -1.8
PMS1-209ENST00000424059 TMEM87AQ8NBN3 555 aa3.81□□□□□ -1.8
PMS1-209ENST00000424059 PTCHD1Q96NR3 888 aa3.81□□□□□ -1.8
PMS1-209ENST00000424059 PLEKHD1A6NEE1 506 aa3.8□□□□□ -1.8
PMS1-209ENST00000424059 C9IYK1 514 aa3.8□□□□□ -1.8
PMS1-209ENST00000424059 H0Y8X5 98 aa3.8□□□□□ -1.8
PMS1-209ENST00000424059 MSL3P1P0C860 447 aa3.8□□□□□ -1.8
PMS1-209ENST00000424059 MMP14P50281 582 aa3.8□□□□□ -1.8
PMS1-209ENST00000424059 ZNF445P59923 1031 aa3.8□□□□□ -1.8
PMS1-209ENST00000424059 KIR3DS1Q14943 382 aa3.8□□□□□ -1.8
PMS1-209ENST00000424059 ZFYVE27Q5T4F4 411 aa3.8□□□□□ -1.8
PMS1-209ENST00000424059 USP48Q86UV5 1035 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms