RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 NPY5RQ15761 445 aa16.09■□□□□ 0.17
MSH5-206ENST00000423982 IRF2BP1Q8IU81 584 aa16.09■□□□□ 0.17
MSH5-206ENST00000423982 CCDC148Q8NFR7 591 aa16.09■□□□□ 0.17
MSH5-206ENST00000423982 MYH2Q9UKX2 1941 aa16.08■□□□□ 0.17
MSH5-206ENST00000423982 ZC3H4Q9UPT8 1303 aaKnown RBP16.08■□□□□ 0.17
MSH5-206ENST00000423982 CCDC196A0A1B0GTZ2 297 aa16.08■□□□□ 0.16
MSH5-206ENST00000423982 PRPF6O94906 941 aaKnown RBP16.08■□□□□ 0.16
MSH5-206ENST00000423982 MCM7P33993 719 aa16.08■□□□□ 0.16
MSH5-206ENST00000423982 PRCPP42785 496 aa16.08■□□□□ 0.16
MSH5-206ENST00000423982 PPARAQ07869 468 aa16.08■□□□□ 0.16
MSH5-206ENST00000423982 FUT2Q10981 343 aa16.08■□□□□ 0.16
MSH5-206ENST00000423982 SEC23AQ15436 765 aa16.08■□□□□ 0.16
MSH5-206ENST00000423982 TTC38Q5R3I4 469 aa16.08■□□□□ 0.16
MSH5-206ENST00000423982 WDR93Q6P2C0 686 aa16.08■□□□□ 0.16
MSH5-206ENST00000423982 GPIHBP1Q8IV16 184 aa16.08■□□□□ 0.16
MSH5-206ENST00000423982 HPCAL4Q9UM19 191 aa16.08■□□□□ 0.16
MSH5-206ENST00000423982 SLX4Q8IY92 1834 aa16.08■□□□□ 0.16
MSH5-206ENST00000423982 LRRC10BA6NIK2 292 aa16.08■□□□□ 0.16
MSH5-206ENST00000423982 SEMA3EO15041 775 aa16.08■□□□□ 0.16
MSH5-206ENST00000423982 ATP2B4P23634 1241 aa16.08■□□□□ 0.16
MSH5-206ENST00000423982 TUBB2AQ13885 445 aa16.08■□□□□ 0.16
MSH5-206ENST00000423982 CCDC122Q5T0U0 273 aa16.08■□□□□ 0.16
MSH5-206ENST00000423982 PDXDC2PQ6P474 469 aa16.08■□□□□ 0.16
MSH5-206ENST00000423982 WDR59Q6PJI9 974 aa16.08■□□□□ 0.16
MSH5-206ENST00000423982 ENAHQ8N8S7 591 aaPredicted RBP16.08■□□□□ 0.16
MSH5-206ENST00000423982 TUBB2BQ9BVA1 445 aa16.08■□□□□ 0.16
MSH5-206ENST00000423982 RNF26Q9BY78 433 aaPredicted RBP16.08■□□□□ 0.16
MSH5-206ENST00000423982 GBP3Q9H0R5 595 aa16.08■□□□□ 0.16
MSH5-206ENST00000423982 EHD4Q9H223 541 aa16.08■□□□□ 0.16
MSH5-206ENST00000423982 DBNDD1Q9H9R9 158 aa16.08■□□□□ 0.16
MSH5-206ENST00000423982 PDE2AO00408 941 aaPredicted RBP16.07■□□□□ 0.16
MSH5-206ENST00000423982 RPS6KA5O75582 802 aa16.07■□□□□ 0.16
MSH5-206ENST00000423982 GGCXP38435 758 aa16.07■□□□□ 0.16
MSH5-206ENST00000423982 KLK7P49862 253 aa16.07■□□□□ 0.16
MSH5-206ENST00000423982 ZNF804AQ7Z570 1209 aa16.07■□□□□ 0.16
MSH5-206ENST00000423982 LACRTQ9GZZ8 138 aa16.07■□□□□ 0.16
MSH5-206ENST00000423982 MYH13Q9UKX3 1938 aa16.07■□□□□ 0.16
MSH5-206ENST00000423982 G3V3G9 751 aa16.07■□□□□ 0.16
MSH5-206ENST00000423982 GRIK5Q16478 980 aa16.07■□□□□ 0.16
MSH5-206ENST00000423982 QSER1Q2KHR3 1735 aa16.07■□□□□ 0.16
MSH5-206ENST00000423982 DCAF8Q5TAQ9 597 aa16.07■□□□□ 0.16
MSH5-206ENST00000423982 STYK1Q6J9G0 422 aa16.07■□□□□ 0.16
MSH5-206ENST00000423982 PIK3AP1Q6ZUJ8 805 aa16.07■□□□□ 0.16
MSH5-206ENST00000423982 C10orf71Q711Q0 1435 aa16.07■□□□□ 0.16
MSH5-206ENST00000423982 MSL3Q8N5Y2 521 aaKnown RBP16.07■□□□□ 0.16
MSH5-206ENST00000423982 AFAP1L1Q8TED9 768 aa16.07■□□□□ 0.16
MSH5-206ENST00000423982 CNKSR1Q969H4 720 aa16.07■□□□□ 0.16
MSH5-206ENST00000423982 PLIN2Q99541 437 aa16.07■□□□□ 0.16
MSH5-206ENST00000423982 ZC3H12CQ9C0D7 883 aaKnown RBP16.07■□□□□ 0.16
MSH5-206ENST00000423982 RWDD2AQ9UIY3 292 aa16.07■□□□□ 0.16
MSH5-206ENST00000423982 IRS2Q9Y4H2 1338 aa16.06■□□□□ 0.16
MSH5-206ENST00000423982 ARAP2Q8WZ64 1704 aa16.06■□□□□ 0.16
MSH5-206ENST00000423982 MXD3Q9BW11 206 aa16.06■□□□□ 0.16
MSH5-206ENST00000423982 NACAP1Q9BZK3 213 aa16.06■□□□□ 0.16
MSH5-206ENST00000423982 CD209Q9NNX6 404 aa16.06■□□□□ 0.16
MSH5-206ENST00000423982 MED4Q9NPJ6 270 aa16.06■□□□□ 0.16
MSH5-206ENST00000423982 PARP1P09874 1014 aaKnown RBP16.06■□□□□ 0.16
MSH5-206ENST00000423982 TTLL6Q8N841 843 aa16.06■□□□□ 0.16
MSH5-206ENST00000423982 TNFRSF25Q93038 417 aa16.06■□□□□ 0.16
MSH5-206ENST00000423982 FERMT2Q96AC1 680 aa16.06■□□□□ 0.16
MSH5-206ENST00000423982 KCNQ5Q9NR82 932 aa16.06■□□□□ 0.16
MSH5-206ENST00000423982 AGPAT5Q9NUQ2 364 aa16.06■□□□□ 0.16
MSH5-206ENST00000423982 MYO1AQ9UBC5 1043 aa16.06■□□□□ 0.16
MSH5-206ENST00000423982 SAR1BQ9Y6B6 198 aa16.06■□□□□ 0.16
MSH5-206ENST00000423982 F8W031 263 aaPredicted RBP16.05■□□□□ 0.16
MSH5-206ENST00000423982 NKRFO15226 690 aaKnown RBP eCLIP16.05■□□□□ 0.16
MSH5-206ENST00000423982 NMT2O60551 498 aa16.05■□□□□ 0.16
MSH5-206ENST00000423982 KCNA3P22001 575 aa16.05■□□□□ 0.16
MSH5-206ENST00000423982 C2orf54Q08AI8 447 aa16.05■□□□□ 0.16
MSH5-206ENST00000423982 TIAM2Q8IVF5 1701 aa16.05■□□□□ 0.16
MSH5-206ENST00000423982 PP2D1A8MPX8 630 aa16.05■□□□□ 0.16
MSH5-206ENST00000423982 AGPSO00116 658 aa16.05■□□□□ 0.16
MSH5-206ENST00000423982 PSMD14O00487 310 aa16.05■□□□□ 0.16
MSH5-206ENST00000423982 RPN1P04843 607 aaKnown RBP16.05■□□□□ 0.16
MSH5-206ENST00000423982 CYP7A1P22680 504 aa16.05■□□□□ 0.16
MSH5-206ENST00000423982 MAGEA9P43362 315 aa16.05■□□□□ 0.16
MSH5-206ENST00000423982 ATP2C1P98194 919 aaPredicted RBP16.05■□□□□ 0.16
MSH5-206ENST00000423982 CYP27A1Q02318 531 aa16.05■□□□□ 0.16
MSH5-206ENST00000423982 CT47A1Q5JQC4 288 aaPredicted RBP16.05■□□□□ 0.16
MSH5-206ENST00000423982 GTF2IP78347 998 aa16.04■□□□□ 0.16
MSH5-206ENST00000423982 AOC3Q16853 763 aa16.04■□□□□ 0.16
MSH5-206ENST00000423982 FKBP15Q5T1M5 1219 aa16.04■□□□□ 0.16
MSH5-206ENST00000423982 OR8K1Q8NGG5 319 aa16.04■□□□□ 0.16
MSH5-206ENST00000423982 SMCR8Q8TEV9 937 aaPredicted RBP16.04■□□□□ 0.16
MSH5-206ENST00000423982 JAKMIP2Q96AA8 810 aa16.04■□□□□ 0.16
MSH5-206ENST00000423982 MACROD2A1Z1Q3 448 aa16.04■□□□□ 0.16
MSH5-206ENST00000423982 XBP1P17861 261 aa16.04■□□□□ 0.16
MSH5-206ENST00000423982 STIM1Q13586 685 aa16.04■□□□□ 0.16
MSH5-206ENST00000423982 ZNF658Q5TYW1 1059 aaPredicted RBP16.04■□□□□ 0.16
MSH5-206ENST00000423982 TTC19Q6DKK2 380 aaPredicted RBP16.04■□□□□ 0.16
MSH5-206ENST00000423982 TMTC2Q8N394 836 aa16.04■□□□□ 0.16
MSH5-206ENST00000423982 MB21D1Q8N884 522 aa16.04■□□□□ 0.16
MSH5-206ENST00000423982 COG1Q8WTW3 980 aa16.04■□□□□ 0.16
MSH5-206ENST00000423982 HDAC7Q8WUI4 952 aa16.04■□□□□ 0.16
MSH5-206ENST00000423982 LUC7L2Q9Y383 392 aaKnown RBP16.04■□□□□ 0.16
MSH5-206ENST00000423982 AARSP49588 968 aaKnown RBP eCLIP16.03■□□□□ 0.162e-6■■■■■ 67
MSH5-206ENST00000423982 CORO7P57737 925 aa16.03■□□□□ 0.16
MSH5-206ENST00000423982 DIXDC1Q155Q3 683 aa16.03■□□□□ 0.16
MSH5-206ENST00000423982 TTC31Q49AM3 519 aaPredicted RBP16.03■□□□□ 0.16
MSH5-206ENST00000423982 NLGN2Q8NFZ4 835 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms