RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 LMAN1P49257 510 aa17.7■□□□□ 0.42
CDH1-202ENST00000422392 NAPAP54920 295 aa17.7■□□□□ 0.42
CDH1-202ENST00000422392 NFIXQ14938 502 aa17.7■□□□□ 0.42
CDH1-202ENST00000422392 FAM98CQ17RN3 349 aaKnown RBP17.7■□□□□ 0.42
CDH1-202ENST00000422392 USP17L2Q6R6M4 530 aa17.7■□□□□ 0.42
CDH1-202ENST00000422392 CCDC148Q8NFR7 591 aa17.7■□□□□ 0.42
CDH1-202ENST00000422392 LACRTQ9GZZ8 138 aa17.7■□□□□ 0.42
CDH1-202ENST00000422392 GNPATO15228 680 aa17.69■□□□□ 0.42
CDH1-202ENST00000422392 PHACTR2O75167 634 aa17.69■□□□□ 0.42
CDH1-202ENST00000422392 ERCC3P19447 782 aa17.69■□□□□ 0.42
CDH1-202ENST00000422392 RASA1P20936 1047 aa17.69■□□□□ 0.42
CDH1-202ENST00000422392 ASIC1P78348 528 aa17.69■□□□□ 0.42
CDH1-202ENST00000422392 CYP27A1Q02318 531 aa17.69■□□□□ 0.42
CDH1-202ENST00000422392 TUBB2AQ13885 445 aa17.69■□□□□ 0.42
CDH1-202ENST00000422392 TRAPPC11Q7Z392 1133 aa17.69■□□□□ 0.42
CDH1-202ENST00000422392 MMS19Q96T76 1030 aa17.69■□□□□ 0.42
CDH1-202ENST00000422392 TUBB2BQ9BVA1 445 aa17.69■□□□□ 0.42
CDH1-202ENST00000422392 IRS2Q9Y4H2 1338 aa17.69■□□□□ 0.42
CDH1-202ENST00000422392 EP400Q96L91 3159 aa17.69■□□□□ 0.42
CDH1-202ENST00000422392 CDK5RAP2Q96SN8 1893 aa17.69■□□□□ 0.42
CDH1-202ENST00000422392 KDM4FA0A1W2PPD8 638 aa17.69■□□□□ 0.42
CDH1-202ENST00000422392 PALM3A6NDB9 673 aaPredicted RBP17.69■□□□□ 0.42
CDH1-202ENST00000422392 POTEB2H3BUK9 544 aa17.69■□□□□ 0.42
CDH1-202ENST00000422392 ERLIN1O75477 346 aa17.69■□□□□ 0.42
CDH1-202ENST00000422392 TBC1D8BQ0IIM8 1120 aa17.69■□□□□ 0.42
CDH1-202ENST00000422392 TSR1Q2NL82 804 aaKnown RBP17.69■□□□□ 0.42
CDH1-202ENST00000422392 CNOT6LQ96LI5 555 aaKnown RBP17.69■□□□□ 0.42
CDH1-202ENST00000422392 PCMTD1Q96MG8 357 aaPredicted RBP17.69■□□□□ 0.42
CDH1-202ENST00000422392 TRIM9Q9C026 710 aa17.69■□□□□ 0.42
CDH1-202ENST00000422392 NYXQ9GZU5 481 aa17.69■□□□□ 0.42
CDH1-202ENST00000422392 NARFQ9UHQ1 456 aa17.69■□□□□ 0.42
CDH1-202ENST00000422392 A0A1W2PQC6 194 aa17.68■□□□□ 0.42
CDH1-202ENST00000422392 CASP8Q14790 479 aa17.68■□□□□ 0.42
CDH1-202ENST00000422392 SPTY2D1Q68D10 685 aaPredicted RBP17.68■□□□□ 0.42
CDH1-202ENST00000422392 KIAA1328Q86T90 577 aa17.68■□□□□ 0.42
CDH1-202ENST00000422392 ANKS1AQ92625 1134 aa17.68■□□□□ 0.42
CDH1-202ENST00000422392 HAUS4Q9H6D7 363 aa17.68■□□□□ 0.42
CDH1-202ENST00000422392 EXOC1Q9NV70 894 aa17.68■□□□□ 0.42
CDH1-202ENST00000422392 LRRIQ3A6PVS8 624 aaPredicted RBP17.68■□□□□ 0.42
CDH1-202ENST00000422392 ZPR1O75312 459 aa17.68■□□□□ 0.42
CDH1-202ENST00000422392 SRGNP10124 158 aa17.68■□□□□ 0.42
CDH1-202ENST00000422392 GNAQP50148 359 aa17.68■□□□□ 0.42
CDH1-202ENST00000422392 DNM2P50570 870 aa17.68■□□□□ 0.42
CDH1-202ENST00000422392 TPTE2Q6XPS3 522 aa17.68■□□□□ 0.42
CDH1-202ENST00000422392 DAGLBQ8NCG7 672 aa17.68■□□□□ 0.42
CDH1-202ENST00000422392 TTYH3Q9C0H2 523 aa17.68■□□□□ 0.42
CDH1-202ENST00000422392 TCP11L1Q9NUJ3 509 aa17.68■□□□□ 0.42
CDH1-202ENST00000422392 SMCO2A6NFE2 343 aa17.67■□□□□ 0.42
CDH1-202ENST00000422392 ZNF185O15231 689 aa17.67■□□□□ 0.42
CDH1-202ENST00000422392 ZMYND10O75800 440 aa17.67■□□□□ 0.42
CDH1-202ENST00000422392 PLEKP08567 350 aaPredicted RBP17.67■□□□□ 0.42
CDH1-202ENST00000422392 OR52Z1P0C646 297 aa17.67■□□□□ 0.42
CDH1-202ENST00000422392 TXLNBQ8N3L3 684 aa17.67■□□□□ 0.42
CDH1-202ENST00000422392 P2RX5Q93086 422 aa17.67■□□□□ 0.42
CDH1-202ENST00000422392 HINFPQ9BQA5 517 aa17.67■□□□□ 0.42
CDH1-202ENST00000422392 NHEJ1Q9H9Q4 299 aaPredicted RBP17.67■□□□□ 0.42
CDH1-202ENST00000422392 BIN2Q9UBW5 565 aaPredicted RBP17.67■□□□□ 0.42
CDH1-202ENST00000422392 PSMD14O00487 310 aa17.67■□□□□ 0.42
CDH1-202ENST00000422392 MTIF2P46199 727 aaKnown RBP17.67■□□□□ 0.42
CDH1-202ENST00000422392 FAM182BQ5T319 152 aa17.67■□□□□ 0.42
CDH1-202ENST00000422392 CCDC102AQ96A19 550 aa17.67■□□□□ 0.42
CDH1-202ENST00000422392 JAKMIP2Q96AA8 810 aa17.67■□□□□ 0.42
CDH1-202ENST00000422392 GDAP1L1Q96MZ0 367 aa17.67■□□□□ 0.42
CDH1-202ENST00000422392 SLC39A2Q9NP94 309 aa17.67■□□□□ 0.42
CDH1-202ENST00000422392 FAN1Q9Y2M0 1017 aa17.67■□□□□ 0.42
CDH1-202ENST00000422392 TNRC6CQ9HCJ0 1690 aaKnown RBP17.67■□□□□ 0.42
CDH1-202ENST00000422392 MACROD2A1Z1Q3 448 aa17.66■□□□□ 0.42
CDH1-202ENST00000422392 CCNE1P24864 410 aa17.66■□□□□ 0.42
CDH1-202ENST00000422392 GPS2Q13227 327 aa17.66■□□□□ 0.42
CDH1-202ENST00000422392 KRT26Q7Z3Y9 468 aa17.66■□□□□ 0.42
CDH1-202ENST00000422392 NOC4LQ9BVI4 516 aaKnown RBP17.66■□□□□ 0.42
CDH1-202ENST00000422392 UBA5Q9GZZ9 404 aa17.66■□□□□ 0.42
CDH1-202ENST00000422392 ZMYND12Q9H0C1 365 aa17.66■□□□□ 0.42
CDH1-202ENST00000422392 TMEM260Q9NX78 707 aa17.66■□□□□ 0.42
CDH1-202ENST00000422392 SAR1BQ9Y6B6 198 aa17.66■□□□□ 0.42
CDH1-202ENST00000422392 MEA1Q16626 185 aa17.66■□□□□ 0.42
CDH1-202ENST00000422392 MIIPQ5JXC2 388 aa17.66■□□□□ 0.42
CDH1-202ENST00000422392 POTEDQ86YR6 584 aa17.66■□□□□ 0.42
CDH1-202ENST00000422392 AMOTL1Q8IY63 956 aa17.66■□□□□ 0.42
CDH1-202ENST00000422392 KIAA0895Q8NCT3 520 aa17.66■□□□□ 0.42
CDH1-202ENST00000422392 SMCR8Q8TEV9 937 aaPredicted RBP17.66■□□□□ 0.42
CDH1-202ENST00000422392 DHTKD1Q96HY7 919 aaPredicted RBP17.66■□□□□ 0.42
CDH1-202ENST00000422392 MMTAG2Q9BU76 263 aaKnown RBP17.66■□□□□ 0.42
CDH1-202ENST00000422392 CNTNAP4Q9C0A0 1308 aa17.65■□□□□ 0.42
CDH1-202ENST00000422392 TXKP42681 527 aa17.65■□□□□ 0.42
CDH1-202ENST00000422392 NONOQ15233 471 aaKnown RBP eCLIP17.65■□□□□ 0.42
CDH1-202ENST00000422392 TBCKQ8TEA7 893 aa17.65■□□□□ 0.42
CDH1-202ENST00000422392 PIGSQ96S52 555 aa17.65■□□□□ 0.42
CDH1-202ENST00000422392 EYA3Q99504 573 aa17.65■□□□□ 0.42
CDH1-202ENST00000422392 ROBO3Q96MS0 1386 aa17.65■□□□□ 0.42
CDH1-202ENST00000422392 BAG3O95817 575 aa17.65■□□□□ 0.42
CDH1-202ENST00000422392 PRPHP41219 470 aa17.65■□□□□ 0.42
CDH1-202ENST00000422392 WDR66Q8TBY9 1149 aa17.65■□□□□ 0.42
CDH1-202ENST00000422392 LAD1O00515 517 aa17.64■□□□□ 0.41
CDH1-202ENST00000422392 MYL1P05976 194 aa17.64■□□□□ 0.41
CDH1-202ENST00000422392 CDK8P49336 464 aa17.64■□□□□ 0.41
CDH1-202ENST00000422392 ZSCAN26Q16670 478 aa17.64■□□□□ 0.41
CDH1-202ENST00000422392 GALNT17Q6IS24 598 aa17.64■□□□□ 0.41
CDH1-202ENST00000422392 GSPT2Q8IYD1 628 aaKnown RBP17.64■□□□□ 0.41
CDH1-202ENST00000422392 SEMA6BQ9H3T3 888 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms