RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 USP17L13C9JLJ4 530 aa12.31□□□□□ -0.44
DDX56-203ENST00000421223 USP17L11C9JVI0 530 aa12.31□□□□□ -0.44
DDX56-203ENST00000421223 USP17L18D6R9N7 530 aa12.31□□□□□ -0.44
DDX56-203ENST00000421223 USP17L22D6RA61 530 aa12.31□□□□□ -0.44
DDX56-203ENST00000421223 USP17L17D6RBQ6 530 aa12.31□□□□□ -0.44
DDX56-203ENST00000421223 USP17L19D6RCP7 530 aa12.31□□□□□ -0.44
DDX56-203ENST00000421223 USP17L20D6RJB6 530 aa12.31□□□□□ -0.44
DDX56-203ENST00000421223 ARHGAP6O43182 974 aa12.31□□□□□ -0.44
DDX56-203ENST00000421223 ECE2O60344 883 aa12.31□□□□□ -0.44
DDX56-203ENST00000421223 USP17L24Q0WX57 530 aa12.31□□□□□ -0.44
DDX56-203ENST00000421223 KCNJ12Q14500 433 aa12.31□□□□□ -0.44
DDX56-203ENST00000421223 USP17L6PQ6QN14 398 aa12.31□□□□□ -0.44
DDX56-203ENST00000421223 TMC4Q7Z404 712 aa12.31□□□□□ -0.44
DDX56-203ENST00000421223 LRRN4CLQ8ND94 238 aa12.31□□□□□ -0.44
DDX56-203ENST00000421223 ANKRD7Q92527 254 aa12.31□□□□□ -0.44
DDX56-203ENST00000421223 JMJD4Q9H9V9 463 aa12.31□□□□□ -0.44
DDX56-203ENST00000421223 UTRNP46939 3433 aa12.31□□□□□ -0.44
DDX56-203ENST00000421223 A0A1B0GTH6 734 aa12.31□□□□□ -0.44
DDX56-203ENST00000421223 PSDA5PKW4 1024 aaPredicted RBP12.31□□□□□ -0.44
DDX56-203ENST00000421223 ZSCAN12O43309 604 aa12.31□□□□□ -0.44
DDX56-203ENST00000421223 SLC37A4O43826 429 aa12.31□□□□□ -0.44
DDX56-203ENST00000421223 TPM1P09493 284 aa12.31□□□□□ -0.44
DDX56-203ENST00000421223 SLC1A4P43007 532 aa12.31□□□□□ -0.44
DDX56-203ENST00000421223 ELF2Q15723 593 aa12.31□□□□□ -0.44
DDX56-203ENST00000421223 USH1GQ495M9 461 aa12.31□□□□□ -0.44
DDX56-203ENST00000421223 CERKLQ49MI3 558 aaPredicted RBP12.31□□□□□ -0.44
DDX56-203ENST00000421223 SPICE1Q8N0Z3 855 aa12.31□□□□□ -0.44
DDX56-203ENST00000421223 SECISBP2LQ93073 1101 aaKnown RBP12.31□□□□□ -0.44
DDX56-203ENST00000421223 CALML4Q96GE6 196 aa12.31□□□□□ -0.44
DDX56-203ENST00000421223 PYM1Q9BRP8 204 aaKnown RBP12.31□□□□□ -0.44
DDX56-203ENST00000421223 SLC39A2Q9NP94 309 aa12.31□□□□□ -0.44
DDX56-203ENST00000421223 ADD3Q9UEY8 706 aaKnown RBP12.31□□□□□ -0.44
DDX56-203ENST00000421223 A0A0U1RQJ8 604 aa12.3□□□□□ -0.44
DDX56-203ENST00000421223 KLRG2A4D1S0 409 aaPredicted RBP12.3□□□□□ -0.44
DDX56-203ENST00000421223 FCER1AP12319 257 aa12.3□□□□□ -0.44
DDX56-203ENST00000421223 ETF1P62495 437 aaKnown RBP12.3□□□□□ -0.44
DDX56-203ENST00000421223 RAD51AP2Q09MP3 1159 aa12.3□□□□□ -0.44
DDX56-203ENST00000421223 STIM1Q13586 685 aa12.3□□□□□ -0.44
DDX56-203ENST00000421223 SEPT2Q15019 361 aa12.3□□□□□ -0.44
DDX56-203ENST00000421223 ATRIPQ8WXE1 791 aa12.3□□□□□ -0.44
DDX56-203ENST00000421223 EXOC1Q9NV70 894 aa12.3□□□□□ -0.44
DDX56-203ENST00000421223 ZNF831Q5JPB2 1677 aa12.3□□□□□ -0.44
DDX56-203ENST00000421223 MYO1BO43795 1136 aa12.3□□□□□ -0.44
DDX56-203ENST00000421223 C21orf2O43822 256 aa12.3□□□□□ -0.44
DDX56-203ENST00000421223 EEF2P13639 858 aaKnown RBP12.3□□□□□ -0.44
DDX56-203ENST00000421223 GABPAQ06546 454 aa12.3□□□□□ -0.44
DDX56-203ENST00000421223 ZNF543Q08ER8 600 aa12.3□□□□□ -0.44
DDX56-203ENST00000421223 ASPRV1Q53RT3 343 aa12.3□□□□□ -0.44
DDX56-203ENST00000421223 CTAGE1Q96RT6 745 aa12.3□□□□□ -0.44
DDX56-203ENST00000421223 ZSWIM4Q9H7M6 989 aa12.3□□□□□ -0.44
DDX56-203ENST00000421223 KIAA1551Q9HCM1 1747 aa12.3□□□□□ -0.44
DDX56-203ENST00000421223 CLRN2A0PK11 232 aa12.29□□□□□ -0.44
DDX56-203ENST00000421223 SLU7O95391 586 aaKnown RBP12.29□□□□□ -0.44
DDX56-203ENST00000421223 FXR1P51114 621 aaKnown RBP eCLIP12.29□□□□□ -0.44
DDX56-203ENST00000421223 COPB1P53618 953 aaKnown RBP12.29□□□□□ -0.44
DDX56-203ENST00000421223 MCM6Q14566 821 aa12.29□□□□□ -0.44
DDX56-203ENST00000421223 ERCC6LQ2NKX8 1250 aa12.29□□□□□ -0.44
DDX56-203ENST00000421223 DAGLBQ8NCG7 672 aa12.29□□□□□ -0.44
DDX56-203ENST00000421223 IPO4Q8TEX9 1081 aaKnown RBP12.29□□□□□ -0.44
DDX56-203ENST00000421223 CCDC47Q96A33 483 aaKnown RBP12.29□□□□□ -0.44
DDX56-203ENST00000421223 ZHX3Q9H4I2 956 aa12.29□□□□□ -0.44
DDX56-203ENST00000421223 RIOX1Q9H6W3 641 aa12.29□□□□□ -0.44
DDX56-203ENST00000421223 PSTPIP2Q9H939 334 aa12.29□□□□□ -0.44
DDX56-203ENST00000421223 MAGEC2Q9UBF1 373 aaPredicted RBP12.29□□□□□ -0.44
DDX56-203ENST00000421223 RWDD2AQ9UIY3 292 aa12.29□□□□□ -0.44
DDX56-203ENST00000421223 SCAF8Q9UPN6 1271 aaKnown RBP12.29□□□□□ -0.44
DDX56-203ENST00000421223 KIF2AO00139 706 aaPredicted RBP12.29□□□□□ -0.44
DDX56-203ENST00000421223 PSMA7O14818 248 aa12.29□□□□□ -0.44
DDX56-203ENST00000421223 STK4Q13043 487 aa12.29□□□□□ -0.44
DDX56-203ENST00000421223 TBX2Q13207 712 aaPredicted RBP12.29□□□□□ -0.44
DDX56-203ENST00000421223 PODNQ7Z5L7 613 aa12.29□□□□□ -0.44
DDX56-203ENST00000421223 REXO1L1PQ8IX06 675 aa12.29□□□□□ -0.44
DDX56-203ENST00000421223 MNS1Q8NEH6 495 aa12.29□□□□□ -0.44
DDX56-203ENST00000421223 AKT1S1Q96B36 256 aa12.29□□□□□ -0.44
DDX56-203ENST00000421223 SBF2Q86WG5 1849 aa12.29□□□□□ -0.44
DDX56-203ENST00000421223 LY75O60449 1722 aa12.29□□□□□ -0.44
DDX56-203ENST00000421223 TCP10L2B9ZVM9 353 aa12.29□□□□□ -0.44
DDX56-203ENST00000421223 CCP110O43303 1012 aa12.29□□□□□ -0.44
DDX56-203ENST00000421223 PPP1R11O60927 126 aaPredicted RBP12.29□□□□□ -0.44
DDX56-203ENST00000421223 EN1Q05925 392 aaPredicted RBP12.29□□□□□ -0.44
DDX56-203ENST00000421223 TCP11X2Q5H9J9 407 aa12.29□□□□□ -0.44
DDX56-203ENST00000421223 CDKAL1Q5VV42 579 aa12.29□□□□□ -0.44
DDX56-203ENST00000421223 SLFN13Q68D06 897 aa12.29□□□□□ -0.44
DDX56-203ENST00000421223 APTXQ7Z2E3 356 aaKnown RBP12.29□□□□□ -0.44
DDX56-203ENST00000421223 TMEM139Q8IV31 216 aa12.29□□□□□ -0.44
DDX56-203ENST00000421223 CSGALNACT2Q8N6G5 542 aa12.29□□□□□ -0.44
DDX56-203ENST00000421223 SNX29Q8TEQ0 813 aa12.29□□□□□ -0.44
DDX56-203ENST00000421223 NUDT12Q9BQG2 462 aa12.29□□□□□ -0.44
DDX56-203ENST00000421223 PDGFDQ9GZP0 370 aaPredicted RBP12.29□□□□□ -0.44
DDX56-203ENST00000421223 PCDHA1Q9Y5I3 950 aa12.29□□□□□ -0.44
DDX56-203ENST00000421223 PNMA6FA0A0J9YX94 578 aa12.28□□□□□ -0.44
DDX56-203ENST00000421223 PPIP5K2O43314 1243 aa12.28□□□□□ -0.44
DDX56-203ENST00000421223 STX10O60499 249 aa12.28□□□□□ -0.44
DDX56-203ENST00000421223 RAD17O75943 681 aa12.28□□□□□ -0.44
DDX56-203ENST00000421223 TMEM266Q2M3C6 531 aa12.28□□□□□ -0.44
DDX56-203ENST00000421223 ZBTB9Q96C00 473 aa12.28□□□□□ -0.44
DDX56-203ENST00000421223 WDR24Q96S15 920 aa12.28□□□□□ -0.44
DDX56-203ENST00000421223 TBC1D7Q9P0N9 293 aa12.28□□□□□ -0.44
DDX56-203ENST00000421223 RNF225M0QZC1 329 aaPredicted RBP12.28□□□□□ -0.44
DDX56-203ENST00000421223 KRT9P35527 623 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms