RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 ITGB8P26012 769 aa20.47■□□□□ 0.87
MSH6-203ENST00000420813 MUM1L1Q5H9M0 696 aa20.47■□□□□ 0.87
MSH6-203ENST00000420813 RILPL2Q969X0 211 aa20.47■□□□□ 0.87
MSH6-203ENST00000420813 MTMR7Q9Y216 660 aa20.47■□□□□ 0.87
MSH6-203ENST00000420813 NT5C2P49902 561 aa20.46■□□□□ 0.87
MSH6-203ENST00000420813 CDK7P50613 346 aa20.46■□□□□ 0.87
MSH6-203ENST00000420813 SNAP25P60880 206 aa20.46■□□□□ 0.87
MSH6-203ENST00000420813 TNFAIP2Q03169 654 aa20.46■□□□□ 0.87
MSH6-203ENST00000420813 GNASQ5JWF2 1037 aa20.46■□□□□ 0.87
MSH6-203ENST00000420813 AKNAD1Q5T1N1 836 aa20.46■□□□□ 0.87
MSH6-203ENST00000420813 ZNF697Q5TEC3 545 aa20.46■□□□□ 0.87
MSH6-203ENST00000420813 SYDE2Q5VT97 1194 aa20.46■□□□□ 0.87
MSH6-203ENST00000420813 CHD1LQ86WJ1 897 aa20.46■□□□□ 0.87
MSH6-203ENST00000420813 TTC14Q96N46 770 aa20.46■□□□□ 0.87
MSH6-203ENST00000420813 ASTN1O14525 1302 aa20.46■□□□□ 0.87
MSH6-203ENST00000420813 A0A0U1RQG5 324 aaPredicted RBP20.45■□□□□ 0.86
MSH6-203ENST00000420813 CTAGE5O15320 804 aa20.45■□□□□ 0.86
MSH6-203ENST00000420813 SDSP20132 328 aa20.45■□□□□ 0.86
MSH6-203ENST00000420813 HAND2P61296 217 aa20.45■□□□□ 0.86
MSH6-203ENST00000420813 IRX5P78411 483 aaPredicted RBP20.45■□□□□ 0.86
MSH6-203ENST00000420813 SMAD3P84022 425 aaKnown RBP20.45■□□□□ 0.86
MSH6-203ENST00000420813 FPGSQ05932 587 aa20.45■□□□□ 0.86
MSH6-203ENST00000420813 TTBK2Q6IQ55 1244 aa20.45■□□□□ 0.86
MSH6-203ENST00000420813 B4GALNT3Q6L9W6 998 aa20.45■□□□□ 0.86
MSH6-203ENST00000420813 MFSD6Q6ZSS7 791 aa20.45■□□□□ 0.86
MSH6-203ENST00000420813 PLEKHM2Q8IWE5 1019 aa20.45■□□□□ 0.86
MSH6-203ENST00000420813 RNF41Q9H4P4 317 aaPredicted RBP20.45■□□□□ 0.86
MSH6-203ENST00000420813 TBX21Q9UL17 535 aa20.45■□□□□ 0.86
MSH6-203ENST00000420813 PNMA2Q9UL42 364 aa20.45■□□□□ 0.86
MSH6-203ENST00000420813 GNEQ9Y223 722 aaKnown RBP20.45■□□□□ 0.86
MSH6-203ENST00000420813 MYH6P13533 1939 aa20.45■□□□□ 0.86
MSH6-203ENST00000420813 LOC102724159A0A0B4J2E5 919 aa20.44■□□□□ 0.86
MSH6-203ENST00000420813 PDHBP11177 359 aa20.44■□□□□ 0.86
MSH6-203ENST00000420813 SLC16A2P36021 539 aa20.44■□□□□ 0.86
MSH6-203ENST00000420813 NUCB1Q02818 461 aa20.44■□□□□ 0.86
MSH6-203ENST00000420813 PWP2Q15269 919 aaKnown RBP20.44■□□□□ 0.86
MSH6-203ENST00000420813 NSMFQ6X4W1 530 aa20.44■□□□□ 0.86
MSH6-203ENST00000420813 MORC4Q8TE76 937 aa20.44■□□□□ 0.86
MSH6-203ENST00000420813 GUCD1Q96NT3 240 aa20.44■□□□□ 0.86
MSH6-203ENST00000420813 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.43■□□□□ 0.86
MSH6-203ENST00000420813 ARVCFO00192 962 aa20.43■□□□□ 0.86
MSH6-203ENST00000420813 TIMP1P01033 207 aa20.43■□□□□ 0.86
MSH6-203ENST00000420813 IQSEC1Q6DN90 963 aa20.43■□□□□ 0.86
MSH6-203ENST00000420813 TLK2Q86UE8 772 aa20.43■□□□□ 0.86
MSH6-203ENST00000420813 TBC1D10CQ8IV04 446 aa20.43■□□□□ 0.86
MSH6-203ENST00000420813 VTI1AQ96AJ9 217 aa20.43■□□□□ 0.86
MSH6-203ENST00000420813 YTHDC1Q96MU7 727 aaKnown RBP20.43■□□□□ 0.86
MSH6-203ENST00000420813 VTA1Q9NP79 307 aa20.43■□□□□ 0.86
MSH6-203ENST00000420813 ADD3Q9UEY8 706 aaKnown RBP20.43■□□□□ 0.86
MSH6-203ENST00000420813 Q9Y3F1 56 aa20.43■□□□□ 0.86
MSH6-203ENST00000420813 FRMPD2Q68DX3 1309 aaPredicted RBP20.43■□□□□ 0.86
MSH6-203ENST00000420813 CABYRO75952 493 aa20.42■□□□□ 0.86
MSH6-203ENST00000420813 IGHDP01880 384 aa20.42■□□□□ 0.86
MSH6-203ENST00000420813 SNHG28P0DPA3 235 aa20.42■□□□□ 0.86
MSH6-203ENST00000420813 EPHB4P54760 987 aa20.42■□□□□ 0.86
MSH6-203ENST00000420813 ZNF543Q08ER8 600 aa20.42■□□□□ 0.86
MSH6-203ENST00000420813 NOL8Q76FK4 1167 aaKnown RBP20.42■□□□□ 0.86
MSH6-203ENST00000420813 ESR2Q92731 530 aa20.42■□□□□ 0.86
MSH6-203ENST00000420813 RNPC3Q96LT9 517 aaKnown RBP20.42■□□□□ 0.86
MSH6-203ENST00000420813 AP5M1Q9H0R1 490 aa20.42■□□□□ 0.86
MSH6-203ENST00000420813 GPCPD1Q9NPB8 672 aa20.42■□□□□ 0.86
MSH6-203ENST00000420813 A0A0C4DFX4 3053 aa20.41■□□□□ 0.86
MSH6-203ENST00000420813 HIP1O00291 1037 aa20.41■□□□□ 0.86
MSH6-203ENST00000420813 ZNF213O14771 459 aa20.41■□□□□ 0.86
MSH6-203ENST00000420813 TLR3O15455 904 aaKnown RBP20.41■□□□□ 0.86
MSH6-203ENST00000420813 BEX3Q00994 111 aa20.41■□□□□ 0.86
MSH6-203ENST00000420813 MFSD5Q6N075 450 aa20.41■□□□□ 0.86
MSH6-203ENST00000420813 TAPT1Q6NXT6 567 aa20.41■□□□□ 0.86
MSH6-203ENST00000420813 FBXO16Q8IX29 292 aaPredicted RBP20.41■□□□□ 0.86
MSH6-203ENST00000420813 FAM126BQ8IXS8 530 aa20.41■□□□□ 0.86
MSH6-203ENST00000420813 SEZ6LQ9BYH1 1024 aa20.41■□□□□ 0.86
MSH6-203ENST00000420813 WDR19Q8NEZ3 1342 aa20.41■□□□□ 0.86
MSH6-203ENST00000420813 NFIBO00712 420 aa20.4■□□□□ 0.86
MSH6-203ENST00000420813 ZEB2O60315 1214 aa20.4■□□□□ 0.86
MSH6-203ENST00000420813 SMPD1P17405 629 aa20.4■□□□□ 0.86
MSH6-203ENST00000420813 NEDD4P46934 1319 aa20.4■□□□□ 0.86
MSH6-203ENST00000420813 ALDH5A1P51649 535 aaPredicted RBP20.4■□□□□ 0.86
MSH6-203ENST00000420813 BAATQ14032 418 aaPredicted RBP20.4■□□□□ 0.86
MSH6-203ENST00000420813 FSCN1Q16658 493 aaKnown RBP20.4■□□□□ 0.86
MSH6-203ENST00000420813 GPATCH4Q5T3I0 446 aaKnown RBP20.4■□□□□ 0.86
MSH6-203ENST00000420813 DGKHQ86XP1 1220 aa20.4■□□□□ 0.86
MSH6-203ENST00000420813 SLC43A3Q8NBI5 491 aa20.4■□□□□ 0.86
MSH6-203ENST00000420813 FAM161BQ96MY7 647 aa20.4■□□□□ 0.86
MSH6-203ENST00000420813 DIAPH3Q9NSV4 1193 aa20.4■□□□□ 0.86
MSH6-203ENST00000420813 TMEM265A0A087WTH1 108 aa20.39■□□□□ 0.85
MSH6-203ENST00000420813 CCDC178Q5BJE1 867 aa20.39■□□□□ 0.85
MSH6-203ENST00000420813 CWC27Q6UX04 472 aaKnown RBP20.39■□□□□ 0.85
MSH6-203ENST00000420813 EEPD1Q7L9B9 569 aa20.39■□□□□ 0.85
MSH6-203ENST00000420813 EXOC6Q8TAG9 804 aa20.39■□□□□ 0.85
MSH6-203ENST00000420813 PDGFCQ9NRA1 345 aa20.39■□□□□ 0.85
MSH6-203ENST00000420813 DDX49Q9Y6V7 483 aaKnown RBP20.39■□□□□ 0.85
MSH6-203ENST00000420813 CUL9Q8IWT3 2517 aa20.38■□□□□ 0.85
MSH6-203ENST00000420813 DYNC1LI2O43237 492 aaPredicted RBP20.38■□□□□ 0.85
MSH6-203ENST00000420813 CD4P01730 458 aa20.38■□□□□ 0.85
MSH6-203ENST00000420813 PPIGQ13427 754 aaKnown RBP eCLIP20.38■□□□□ 0.85
MSH6-203ENST00000420813 CXCL17Q6UXB2 119 aa20.38■□□□□ 0.85
MSH6-203ENST00000420813 IQCA1Q86XH1 822 aa20.38■□□□□ 0.85
MSH6-203ENST00000420813 CLEC4DQ8WXI8 215 aa20.38■□□□□ 0.85
MSH6-203ENST00000420813 PURBQ96QR8 312 aaKnown RBP20.38■□□□□ 0.85
MSH6-203ENST00000420813 DSCC1Q9BVC3 393 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms