RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 ORC1Q13415 861 aa8.47□□□□□ -1.05
HMGN1-205ENST00000419378 PRKG1Q13976 671 aa8.47□□□□□ -1.05
HMGN1-205ENST00000419378 SUPT20HL1Q3ZLR7 823 aa8.47□□□□□ -1.05
HMGN1-205ENST00000419378 NBPF12Q5TAG4 269 aaPredicted RBP8.47□□□□□ -1.05
HMGN1-205ENST00000419378 PI16Q6UXB8 463 aa8.47□□□□□ -1.05
HMGN1-205ENST00000419378 ARMC9Q7Z3E5 817 aa8.47□□□□□ -1.05
HMGN1-205ENST00000419378 ZNF438Q7Z4V0 828 aa8.47□□□□□ -1.05
HMGN1-205ENST00000419378 DZIP1Q86YF9 867 aaKnown RBP8.47□□□□□ -1.05
HMGN1-205ENST00000419378 RASAL3Q86YV0 1011 aa8.47□□□□□ -1.05
HMGN1-205ENST00000419378 SIRT2Q8IXJ6 389 aa8.47□□□□□ -1.05
HMGN1-205ENST00000419378 SPATA5Q8NB90 893 aa8.47□□□□□ -1.05
HMGN1-205ENST00000419378 GMCL1Q96IK5 515 aa8.47□□□□□ -1.05
HMGN1-205ENST00000419378 TEPSINQ96N21 525 aa8.47□□□□□ -1.05
HMGN1-205ENST00000419378 CHMP4BQ9H444 224 aaKnown RBP8.47□□□□□ -1.05
HMGN1-205ENST00000419378 NDFIP2Q9NV92 336 aa8.47□□□□□ -1.05
HMGN1-205ENST00000419378 TLR7Q9NYK1 1049 aaKnown RBP8.47□□□□□ -1.05
HMGN1-205ENST00000419378 TMOD2Q9NZR1 351 aa8.47□□□□□ -1.05
HMGN1-205ENST00000419378 ABCF2Q9UG63 623 aa8.47□□□□□ -1.05
HMGN1-205ENST00000419378 DBNLQ9UJU6 430 aaKnown RBP8.47□□□□□ -1.05
HMGN1-205ENST00000419378 ANGEL1Q9UNK9 670 aaKnown RBP8.47□□□□□ -1.05
HMGN1-205ENST00000419378 FZD1Q9UP38 647 aa8.47□□□□□ -1.05
HMGN1-205ENST00000419378 OTOFQ9HC10 1997 aa8.47□□□□□ -1.05
HMGN1-205ENST00000419378 MAST2Q6P0Q8 1798 aa8.47□□□□□ -1.05
HMGN1-205ENST00000419378 CDC14CA4D256 554 aa8.46□□□□□ -1.06
HMGN1-205ENST00000419378 UNCXA6NJT0 531 aa8.46□□□□□ -1.06
HMGN1-205ENST00000419378 HMMRO75330 724 aa8.46□□□□□ -1.06
HMGN1-205ENST00000419378 HSPA8P11142 646 aaKnown RBP8.46□□□□□ -1.06
HMGN1-205ENST00000419378 MCAMP43121 646 aa8.46□□□□□ -1.06
HMGN1-205ENST00000419378 CTCFP49711 727 aaPredicted RBP8.46□□□□□ -1.06
HMGN1-205ENST00000419378 KIF23Q02241 960 aaPredicted RBP8.46□□□□□ -1.06
HMGN1-205ENST00000419378 GRIN2CQ14957 1233 aa8.46□□□□□ -1.06
HMGN1-205ENST00000419378 MAP3K11Q16584 847 aa8.46□□□□□ -1.06
HMGN1-205ENST00000419378 LDLRAD1Q5T700 205 aa8.46□□□□□ -1.06
HMGN1-205ENST00000419378 FKBP1CQ5VVH2 108 aa8.46□□□□□ -1.06
HMGN1-205ENST00000419378 PDE12Q6L8Q7 609 aaKnown RBP8.46□□□□□ -1.06
HMGN1-205ENST00000419378 CDC42EP5Q6NZY7 148 aa8.46□□□□□ -1.06
HMGN1-205ENST00000419378 XKR5Q6UX68 686 aa8.46□□□□□ -1.06
HMGN1-205ENST00000419378 ERC1Q8IUD2 1116 aa8.46□□□□□ -1.06
HMGN1-205ENST00000419378 VWA5B2Q8N398 1253 aa8.46□□□□□ -1.06
HMGN1-205ENST00000419378 EAF2Q96CJ1 260 aaPredicted RBP8.46□□□□□ -1.06
HMGN1-205ENST00000419378 TMEM39BQ9GZU3 492 aa8.46□□□□□ -1.06
HMGN1-205ENST00000419378 ELP3Q9H9T3 547 aa8.46□□□□□ -1.06
HMGN1-205ENST00000419378 FOXD3Q9UJU5 478 aaPredicted RBP8.46□□□□□ -1.06
HMGN1-205ENST00000419378 GAKO14976 1311 aa8.46□□□□□ -1.06
HMGN1-205ENST00000419378 AKAP11Q9UKA4 1901 aa8.46□□□□□ -1.06
HMGN1-205ENST00000419378 MYH2Q9UKX2 1941 aa8.46□□□□□ -1.06
HMGN1-205ENST00000419378 RPAP1Q9BWH6 1393 aaPredicted RBP8.46□□□□□ -1.06
HMGN1-205ENST00000419378 PNMA6FA0A0J9YX94 578 aa8.45□□□□□ -1.06
HMGN1-205ENST00000419378 TNFRSF21O75509 655 aa8.45□□□□□ -1.06
HMGN1-205ENST00000419378 IREB2P48200 963 aaKnown RBP8.45□□□□□ -1.06
HMGN1-205ENST00000419378 RRP1P56182 461 aaKnown RBP8.45□□□□□ -1.06
HMGN1-205ENST00000419378 NFIAQ12857 509 aa8.45□□□□□ -1.06
HMGN1-205ENST00000419378 ENOX2Q16206 610 aaKnown RBP8.45□□□□□ -1.06
HMGN1-205ENST00000419378 HSP90AB4PQ58FF6 505 aa8.45□□□□□ -1.06
HMGN1-205ENST00000419378 CCDC158Q5M9N0 1113 aa8.45□□□□□ -1.06
HMGN1-205ENST00000419378 TTC39AQ5SRH9 613 aa8.45□□□□□ -1.06
HMGN1-205ENST00000419378 COL13A1Q5TAT6 717 aaPredicted RBP8.45□□□□□ -1.06
HMGN1-205ENST00000419378 SPTY2D1Q68D10 685 aaPredicted RBP8.45□□□□□ -1.06
HMGN1-205ENST00000419378 FAM83AQ86UY5 434 aa8.45□□□□□ -1.06
HMGN1-205ENST00000419378 AACSQ86V21 672 aa8.45□□□□□ -1.06
HMGN1-205ENST00000419378 ZNF384Q8TF68 577 aa8.45□□□□□ -1.06
HMGN1-205ENST00000419378 CLMNQ96JQ2 1002 aa8.45□□□□□ -1.06
HMGN1-205ENST00000419378 ZNF512BQ96KM6 892 aaPredicted RBP8.45□□□□□ -1.06
HMGN1-205ENST00000419378 CCDC8Q9H0W5 538 aaPredicted RBP8.45□□□□□ -1.06
HMGN1-205ENST00000419378 IL1RAPL2Q9NP60 686 aa8.45□□□□□ -1.06
HMGN1-205ENST00000419378 TMEM63CQ9P1W3 806 aa8.45□□□□□ -1.06
HMGN1-205ENST00000419378 MROH7-TTC4A0A0A0MT08 1334 aa8.45□□□□□ -1.06
HMGN1-205ENST00000419378 RFX7Q2KHR2 1363 aa8.45□□□□□ -1.06
HMGN1-205ENST00000419378 GPR25O00155 361 aa8.44□□□□□ -1.06
HMGN1-205ENST00000419378 EIF1AYO14602 144 aaKnown RBP8.44□□□□□ -1.06
HMGN1-205ENST00000419378 CA12O43570 354 aa8.44□□□□□ -1.06
HMGN1-205ENST00000419378 USP2O75604 605 aaPredicted RBP8.44□□□□□ -1.06
HMGN1-205ENST00000419378 SASH3O75995 380 aa8.44□□□□□ -1.06
HMGN1-205ENST00000419378 CD33P20138 364 aa8.44□□□□□ -1.06
HMGN1-205ENST00000419378 LBX1P52954 281 aa8.44□□□□□ -1.06
HMGN1-205ENST00000419378 MECOMQ03112 1051 aa8.44□□□□□ -1.06
HMGN1-205ENST00000419378 LAMC2Q13753 1193 aa8.44□□□□□ -1.06
HMGN1-205ENST00000419378 KRT25Q7Z3Z0 450 aa8.44□□□□□ -1.06
HMGN1-205ENST00000419378 NSUN4Q96CB9 384 aaKnown RBP8.44□□□□□ -1.06
HMGN1-205ENST00000419378 KIF1BPQ96EK5 621 aa8.44□□□□□ -1.06
HMGN1-205ENST00000419378 CSRNP1Q96S65 589 aa8.44□□□□□ -1.06
HMGN1-205ENST00000419378 GSX2Q9BZM3 304 aa8.44□□□□□ -1.06
HMGN1-205ENST00000419378 C11orf16Q9NQ32 467 aa8.44□□□□□ -1.06
HMGN1-205ENST00000419378 PRDM10Q9NQV6 1147 aa8.44□□□□□ -1.06
HMGN1-205ENST00000419378 USP40Q9NVE5 1235 aa8.44□□□□□ -1.06
HMGN1-205ENST00000419378 RAI14Q9P0K7 980 aa8.44□□□□□ -1.06
HMGN1-205ENST00000419378 MARK1Q9P0L2 795 aa8.44□□□□□ -1.06
HMGN1-205ENST00000419378 LAMB1P07942 1786 aa8.43□□□□□ -1.06
HMGN1-205ENST00000419378 CYP2E1P05181 493 aaPredicted RBP8.43□□□□□ -1.06
HMGN1-205ENST00000419378 NEFLP07196 543 aa8.43□□□□□ -1.06
HMGN1-205ENST00000419378 BTDP43251 543 aa8.43□□□□□ -1.06
HMGN1-205ENST00000419378 RGS3P49796 1198 aa8.43□□□□□ -1.06
HMGN1-205ENST00000419378 TCP10Q12799 353 aa8.43□□□□□ -1.06
HMGN1-205ENST00000419378 CCINQ13939 588 aa8.43□□□□□ -1.06
HMGN1-205ENST00000419378 ANKRD13AQ8IZ07 590 aa8.43□□□□□ -1.06
HMGN1-205ENST00000419378 CLASRPQ8N2M8 674 aaKnown RBP8.43□□□□□ -1.06
HMGN1-205ENST00000419378 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.43□□□□□ -1.06
HMGN1-205ENST00000419378 SNX29Q8TEQ0 813 aa8.43□□□□□ -1.06
HMGN1-205ENST00000419378 FAM151AQ8WW52 585 aa8.43□□□□□ -1.06
HMGN1-205ENST00000419378 IDI2Q9BXS1 227 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms