RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 ANKS1AQ92625 1134 aa16.22■□□□□ 0.19
HDAC9-208ENST00000417496 MMS19Q96T76 1030 aa16.22■□□□□ 0.19
HDAC9-208ENST00000417496 TRIM9Q9C026 710 aa16.22■□□□□ 0.19
HDAC9-208ENST00000417496 THAP9Q9H5L6 903 aa16.22■□□□□ 0.19
HDAC9-208ENST00000417496 VPS18Q9P253 973 aa16.22■□□□□ 0.19
HDAC9-208ENST00000417496 BIN2Q9UBW5 565 aaPredicted RBP16.22■□□□□ 0.19
HDAC9-208ENST00000417496 DLEC1Q9Y238 1755 aa16.22■□□□□ 0.19
HDAC9-208ENST00000417496 ZMYND10O75800 440 aa16.22■□□□□ 0.19
HDAC9-208ENST00000417496 GNAQP50148 359 aa16.22■□□□□ 0.19
HDAC9-208ENST00000417496 PIP4K2BP78356 416 aa16.22■□□□□ 0.19
HDAC9-208ENST00000417496 WHAMMP3Q1A5X7 153 aa16.22■□□□□ 0.19
HDAC9-208ENST00000417496 TSR1Q2NL82 804 aaKnown RBP16.22■□□□□ 0.19
HDAC9-208ENST00000417496 CCDC148Q8NFR7 591 aa16.22■□□□□ 0.19
HDAC9-208ENST00000417496 GDAP1L1Q96MZ0 367 aa16.22■□□□□ 0.19
HDAC9-208ENST00000417496 TCP11L1Q9NUJ3 509 aa16.22■□□□□ 0.19
HDAC9-208ENST00000417496 TMEM260Q9NX78 707 aa16.22■□□□□ 0.19
HDAC9-208ENST00000417496 LMAN1P49257 510 aa16.21■□□□□ 0.19
HDAC9-208ENST00000417496 HDXQ7Z353 690 aa16.21■□□□□ 0.19
HDAC9-208ENST00000417496 ARHGEF1Q92888 912 aaKnown RBP16.21■□□□□ 0.19
HDAC9-208ENST00000417496 SLC39A2Q9NP94 309 aa16.21■□□□□ 0.19
HDAC9-208ENST00000417496 EXOC1Q9NV70 894 aa16.21■□□□□ 0.19
HDAC9-208ENST00000417496 MYO1AQ9UBC5 1043 aa16.21■□□□□ 0.19
HDAC9-208ENST00000417496 A0A1W2PQC6 194 aa16.21■□□□□ 0.19
HDAC9-208ENST00000417496 ZNF185O15231 689 aa16.21■□□□□ 0.19
HDAC9-208ENST00000417496 PLEKP08567 350 aaPredicted RBP16.21■□□□□ 0.19
HDAC9-208ENST00000417496 OR52Z1P0C646 297 aa16.21■□□□□ 0.19
HDAC9-208ENST00000417496 SRGNP10124 158 aa16.21■□□□□ 0.19
HDAC9-208ENST00000417496 TXKP42681 527 aa16.21■□□□□ 0.19
HDAC9-208ENST00000417496 DNM2P50570 870 aa16.21■□□□□ 0.19
HDAC9-208ENST00000417496 P2RX5Q93086 422 aa16.21■□□□□ 0.19
HDAC9-208ENST00000417496 CNOT6LQ96LI5 555 aaKnown RBP16.21■□□□□ 0.19
HDAC9-208ENST00000417496 NHEJ1Q9H9Q4 299 aaPredicted RBP16.21■□□□□ 0.19
HDAC9-208ENST00000417496 RREB1Q92766 1687 aa16.21■□□□□ 0.19
HDAC9-208ENST00000417496 MACROD2A1Z1Q3 448 aa16.2■□□□□ 0.18
HDAC9-208ENST00000417496 BAG3O95817 575 aa16.2■□□□□ 0.18
HDAC9-208ENST00000417496 FAM193AP78312 1265 aa16.2■□□□□ 0.18
HDAC9-208ENST00000417496 CASP8Q14790 479 aa16.2■□□□□ 0.18
HDAC9-208ENST00000417496 TAF3Q5VWG9 929 aa16.2■□□□□ 0.18
HDAC9-208ENST00000417496 TRAPPC11Q7Z392 1133 aa16.2■□□□□ 0.18
HDAC9-208ENST00000417496 KRT26Q7Z3Y9 468 aa16.2■□□□□ 0.18
HDAC9-208ENST00000417496 KIAA1328Q86T90 577 aa16.2■□□□□ 0.18
HDAC9-208ENST00000417496 TBCKQ8TEA7 893 aa16.2■□□□□ 0.18
HDAC9-208ENST00000417496 PIGSQ96S52 555 aa16.2■□□□□ 0.18
HDAC9-208ENST00000417496 EYA3Q99504 573 aa16.2■□□□□ 0.18
HDAC9-208ENST00000417496 MMTAG2Q9BU76 263 aaKnown RBP16.2■□□□□ 0.18
HDAC9-208ENST00000417496 ZMYND12Q9H0C1 365 aa16.2■□□□□ 0.18
HDAC9-208ENST00000417496 HAUS4Q9H6D7 363 aa16.2■□□□□ 0.18
HDAC9-208ENST00000417496 KIAA1551Q9HCM1 1747 aa16.2■□□□□ 0.18
HDAC9-208ENST00000417496 ROBO1Q9Y6N7 1651 aa16.2■□□□□ 0.18
HDAC9-208ENST00000417496 LRRIQ3A6PVS8 624 aaPredicted RBP16.2■□□□□ 0.18
HDAC9-208ENST00000417496 RPS6KA4O75676 772 aa16.2■□□□□ 0.18
HDAC9-208ENST00000417496 MTIF2P46199 727 aaKnown RBP16.2■□□□□ 0.18
HDAC9-208ENST00000417496 CDK8P49336 464 aa16.2■□□□□ 0.18
HDAC9-208ENST00000417496 TUBB2AQ13885 445 aa16.2■□□□□ 0.18
HDAC9-208ENST00000417496 POTEDQ86YR6 584 aa16.2■□□□□ 0.18
HDAC9-208ENST00000417496 AMOTL1Q8IY63 956 aa16.2■□□□□ 0.18
HDAC9-208ENST00000417496 DAGLBQ8NCG7 672 aa16.2■□□□□ 0.18
HDAC9-208ENST00000417496 WDR66Q8TBY9 1149 aa16.2■□□□□ 0.18
HDAC9-208ENST00000417496 TUBB2BQ9BVA1 445 aa16.2■□□□□ 0.18
HDAC9-208ENST00000417496 NOC4LQ9BVI4 516 aaKnown RBP16.2■□□□□ 0.18
HDAC9-208ENST00000417496 TTYH3Q9C0H2 523 aa16.2■□□□□ 0.18
HDAC9-208ENST00000417496 PSMD14O00487 310 aa16.19■□□□□ 0.18
HDAC9-208ENST00000417496 ERLIN1O75477 346 aa16.19■□□□□ 0.18
HDAC9-208ENST00000417496 NONOQ15233 471 aaKnown RBP eCLIP16.19■□□□□ 0.18
HDAC9-208ENST00000417496 MIIPQ5JXC2 388 aa16.19■□□□□ 0.18
HDAC9-208ENST00000417496 KIAA0895Q8NCT3 520 aa16.19■□□□□ 0.18
HDAC9-208ENST00000417496 SMCR8Q8TEV9 937 aaPredicted RBP16.19■□□□□ 0.18
HDAC9-208ENST00000417496 CEP95Q96GE4 821 aa16.19■□□□□ 0.18
HDAC9-208ENST00000417496 FRMPD2Q68DX3 1309 aaPredicted RBP16.19■□□□□ 0.18
HDAC9-208ENST00000417496 BTDP43251 543 aa16.19■□□□□ 0.18
HDAC9-208ENST00000417496 BARGINQ6ZT62 677 aa16.19■□□□□ 0.18
HDAC9-208ENST00000417496 DYMQ7RTS9 669 aa16.19■□□□□ 0.18
HDAC9-208ENST00000417496 JAKMIP2Q96AA8 810 aa16.19■□□□□ 0.18
HDAC9-208ENST00000417496 DHTKD1Q96HY7 919 aaPredicted RBP16.19■□□□□ 0.18
HDAC9-208ENST00000417496 UIMC1Q96RL1 719 aa16.19■□□□□ 0.18
HDAC9-208ENST00000417496 SEMA6BQ9H3T3 888 aa16.19■□□□□ 0.18
HDAC9-208ENST00000417496 CALCOCO1Q9P1Z2 691 aa16.19■□□□□ 0.18
HDAC9-208ENST00000417496 FAN1Q9Y2M0 1017 aa16.19■□□□□ 0.18
HDAC9-208ENST00000417496 SAR1BQ9Y6B6 198 aa16.19■□□□□ 0.18
HDAC9-208ENST00000417496 COL22A1Q8NFW1 1626 aaPredicted RBP16.19■□□□□ 0.18
HDAC9-208ENST00000417496 CNTNAP4Q9C0A0 1308 aa16.19■□□□□ 0.18
HDAC9-208ENST00000417496 USP17L5A8MUK1 530 aa16.18■□□□□ 0.18
HDAC9-208ENST00000417496 POTEB2H3BUK9 544 aa16.18■□□□□ 0.18
HDAC9-208ENST00000417496 EPHB6O15197 1021 aa16.18■□□□□ 0.18
HDAC9-208ENST00000417496 CCNE1P24864 410 aa16.18■□□□□ 0.18
HDAC9-208ENST00000417496 EIF6P56537 245 aaKnown RBP16.18■□□□□ 0.18
HDAC9-208ENST00000417496 NEK8Q86SG6 692 aa16.18■□□□□ 0.18
HDAC9-208ENST00000417496 CCDC102AQ96A19 550 aa16.18■□□□□ 0.18
HDAC9-208ENST00000417496 RTFDC1Q9BY42 306 aaPredicted RBP16.18■□□□□ 0.18
HDAC9-208ENST00000417496 ZNF263O14978 683 aa16.18■□□□□ 0.18
HDAC9-208ENST00000417496 PRPHP41219 470 aa16.18■□□□□ 0.18
HDAC9-208ENST00000417496 MEA1Q16626 185 aa16.18■□□□□ 0.18
HDAC9-208ENST00000417496 GALNT17Q6IS24 598 aa16.18■□□□□ 0.18
HDAC9-208ENST00000417496 CLEC10AQ8IUN9 316 aa16.18■□□□□ 0.18
HDAC9-208ENST00000417496 GJA10Q969M2 543 aa16.18■□□□□ 0.18
HDAC9-208ENST00000417496 FAM207AQ9NSI2 230 aaPredicted RBP16.18■□□□□ 0.18
HDAC9-208ENST00000417496 WNK3Q9BYP7 1800 aa16.18■□□□□ 0.18
HDAC9-208ENST00000417496 ATP2B2Q01814 1243 aa16.17■□□□□ 0.18
HDAC9-208ENST00000417496 GSPT2Q8IYD1 628 aaKnown RBP16.17■□□□□ 0.18
HDAC9-208ENST00000417496 COA7Q96BR5 231 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms